RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 CADPS2Q86UW7 1296 aa9.94□□□□□ -0.82
TIMM9P3-201ENST00000428659 BBXQ8WY36 941 aaPredicted RBP9.94□□□□□ -0.82
TIMM9P3-201ENST00000428659 POTEGQ6S5H5 508 aa9.93□□□□□ -0.82
TIMM9P3-201ENST00000428659 MARVELD3Q96A59 401 aa9.91□□□□□ -0.82
TIMM9P3-201ENST00000428659 POTEB3A0JP26 581 aa9.9□□□□□ -0.82
TIMM9P3-201ENST00000428659 POTEBQ6S5H4 581 aa9.9□□□□□ -0.82
TIMM9P3-201ENST00000428659 NCKAP5LQ9HCH0 1330 aa9.88□□□□□ -0.83
TIMM9P3-201ENST00000428659 KHSRPQ92945 711 aaKnown RBP eCLIP9.88□□□□□ -0.83
TIMM9P3-201ENST00000428659 SNPHO15079 494 aa9.86□□□□□ -0.83
TIMM9P3-201ENST00000428659 DSG2Q14126 1118 aa9.86□□□□□ -0.83
TIMM9P3-201ENST00000428659 PAXIP1Q6ZW49 1069 aaPredicted RBP9.85□□□□□ -0.83
TIMM9P3-201ENST00000428659 CRISPLD2Q9H0B8 497 aa9.85□□□□□ -0.83
TIMM9P3-201ENST00000428659 GPHNQ9NQX3 736 aaPredicted RBP9.85□□□□□ -0.83
TIMM9P3-201ENST00000428659 GPR153Q6NV75 609 aa9.84□□□□□ -0.83
TIMM9P3-201ENST00000428659 TMC2Q8TDI7 906 aa9.84□□□□□ -0.83
TIMM9P3-201ENST00000428659 ARSIQ5FYB1 569 aa9.83□□□□□ -0.84
TIMM9P3-201ENST00000428659 CFAP44Q96MT7 982 aa9.83□□□□□ -0.84
TIMM9P3-201ENST00000428659 HOXB1P14653 301 aaPredicted RBP9.81□□□□□ -0.84
TIMM9P3-201ENST00000428659 FOXK1P85037 733 aa9.81□□□□□ -0.84
TIMM9P3-201ENST00000428659 PLPP6Q8IY26 295 aa9.81□□□□□ -0.84
TIMM9P3-201ENST00000428659 SPRYD3Q8NCJ5 442 aa9.81□□□□□ -0.84
TIMM9P3-201ENST00000428659 RYDENQ9NUL5 291 aaKnown RBP9.81□□□□□ -0.84
TIMM9P3-201ENST00000428659 DOK7Q18PE1 504 aa9.8□□□□□ -0.84
TIMM9P3-201ENST00000428659 ZNF710Q8N1W2 664 aa9.78□□□□□ -0.84
TIMM9P3-201ENST00000428659 LARP6Q9BRS8 491 aaKnown RBP9.78□□□□□ -0.84
TIMM9P3-201ENST00000428659 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.77□□□□□ -0.85
TIMM9P3-201ENST00000428659 FAM205CA6NFA0 338 aa9.76□□□□□ -0.85
TIMM9P3-201ENST00000428659 EMP3P54852 163 aa9.76□□□□□ -0.85
TIMM9P3-201ENST00000428659 PCDHGA4Q9Y5G9 962 aa9.75□□□□□ -0.85
TIMM9P3-201ENST00000428659 SLC34A2O95436 690 aa9.74□□□□□ -0.85
TIMM9P3-201ENST00000428659 PDE4AP27815 886 aa9.74□□□□□ -0.85
TIMM9P3-201ENST00000428659 HS3ST6Q96QI5 342 aa9.74□□□□□ -0.85
TIMM9P3-201ENST00000428659 KDM4FA0A1W2PPD8 638 aa9.73□□□□□ -0.85
TIMM9P3-201ENST00000428659 NUDT7P0C024 238 aa9.73□□□□□ -0.85
TIMM9P3-201ENST00000428659 PPP1R15BQ5SWA1 713 aa9.73□□□□□ -0.85
TIMM9P3-201ENST00000428659 CDAN1Q8IWY9 1227 aa9.73□□□□□ -0.85
TIMM9P3-201ENST00000428659 TSHZ2Q9NRE2 1034 aa9.73□□□□□ -0.85
TIMM9P3-201ENST00000428659 MFSD10Q14728 455 aa9.72□□□□□ -0.85
TIMM9P3-201ENST00000428659 PTCD2Q8WV60 388 aaKnown RBP9.71□□□□□ -0.86
TIMM9P3-201ENST00000428659 ZSWIM6Q9HCJ5 1215 aa9.71□□□□□ -0.86
TIMM9P3-201ENST00000428659 UPF1Q92900 1129 aaKnown RBP eCLIP9.7□□□□□ -0.86
TIMM9P3-201ENST00000428659 EMILIN3Q9NT22 766 aa9.7□□□□□ -0.86
TIMM9P3-201ENST00000428659 RIMBP2O15034 1052 aa9.69□□□□□ -0.86
TIMM9P3-201ENST00000428659 VARS2Q5ST30 1063 aaKnown RBP9.68□□□□□ -0.86
TIMM9P3-201ENST00000428659 OXER1Q8TDS5 423 aa9.68□□□□□ -0.86
TIMM9P3-201ENST00000428659 DDX27Q96GQ7 796 aaKnown RBP9.68□□□□□ -0.86
TIMM9P3-201ENST00000428659 ERBB3P21860 1342 aa9.67□□□□□ -0.86
TIMM9P3-201ENST00000428659 KRTAP3-3Q9BYR6 98 aa9.67□□□□□ -0.86
TIMM9P3-201ENST00000428659 KRTAP3-2Q9BYR7 98 aa9.67□□□□□ -0.86
TIMM9P3-201ENST00000428659 LHX6Q9UPM6 363 aa9.67□□□□□ -0.86
TIMM9P3-201ENST00000428659 ZNF316A6NFI3 1004 aaPredicted RBP9.65□□□□□ -0.86
TIMM9P3-201ENST00000428659 POTEEQ6S8J3 1075 aa9.64□□□□□ -0.87
TIMM9P3-201ENST00000428659 CAMK2BQ13554 666 aa9.61□□□□□ -0.87
TIMM9P3-201ENST00000428659 PLCB2Q00722 1185 aa9.58□□□□□ -0.88
TIMM9P3-201ENST00000428659 PCDH10Q9P2E7 1040 aa9.58□□□□□ -0.88
TIMM9P3-201ENST00000428659 ZNF687Q8N1G0 1237 aa9.57□□□□□ -0.88
TIMM9P3-201ENST00000428659 AXIN2Q9Y2T1 843 aa9.57□□□□□ -0.88
TIMM9P3-201ENST00000428659 DPYSL4O14531 572 aa9.55□□□□□ -0.88
TIMM9P3-201ENST00000428659 ANO8Q9HCE9 1232 aaPredicted RBP9.55□□□□□ -0.88
TIMM9P3-201ENST00000428659 PLSCR2Q9NRY7 297 aa9.55□□□□□ -0.88
TIMM9P3-201ENST00000428659 EVI5O60447 810 aa9.54□□□□□ -0.88
TIMM9P3-201ENST00000428659 TBC1D12O60347 775 aa9.53□□□□□ -0.88
TIMM9P3-201ENST00000428659 MAP3K9P80192 1104 aa9.53□□□□□ -0.88
TIMM9P3-201ENST00000428659 SPNS2Q8IVW8 549 aa9.51□□□□□ -0.89
TIMM9P3-201ENST00000428659 E2F4Q16254 413 aa9.49□□□□□ -0.89
TIMM9P3-201ENST00000428659 PSEN2P49810 448 aa9.48□□□□□ -0.89
TIMM9P3-201ENST00000428659 DMRTA1Q5VZB9 504 aa9.48□□□□□ -0.89
TIMM9P3-201ENST00000428659 KDM2AQ9Y2K7 1162 aa9.48□□□□□ -0.89
TIMM9P3-201ENST00000428659 FOSBP53539 338 aa9.47□□□□□ -0.89
TIMM9P3-201ENST00000428659 ZNF454Q8N9F8 522 aa9.47□□□□□ -0.89
TIMM9P3-201ENST00000428659 PCDHGA10Q9Y5H3 936 aa9.46□□□□□ -0.9
TIMM9P3-201ENST00000428659 HAP1P54257 671 aaPredicted RBP9.45□□□□□ -0.9
TIMM9P3-201ENST00000428659 ADAM33Q9BZ11 813 aa9.45□□□□□ -0.9
TIMM9P3-201ENST00000428659 WDR70Q9NW82 654 aa9.45□□□□□ -0.9
TIMM9P3-201ENST00000428659 PRIM1P49642 420 aaKnown RBP9.44□□□□□ -0.9
TIMM9P3-201ENST00000428659 ANKRD13DQ6ZTN6 518 aa9.44□□□□□ -0.9
TIMM9P3-201ENST00000428659 KCNV2Q8TDN2 545 aa9.44□□□□□ -0.9
TIMM9P3-201ENST00000428659 MMRN1Q13201 1228 aa9.43□□□□□ -0.9
TIMM9P3-201ENST00000428659 DDX12PQ92771 950 aa9.43□□□□□ -0.9
TIMM9P3-201ENST00000428659 LSM11P83369 360 aaKnown RBP eCLIP9.42□□□□□ -0.9
TIMM9P3-201ENST00000428659 ARHGAP33O14559 1287 aa9.41□□□□□ -0.9
TIMM9P3-201ENST00000428659 PPP4R3BQ5MIZ7 849 aa9.41□□□□□ -0.9
TIMM9P3-201ENST00000428659 ARIH1Q9Y4X5 557 aaPredicted RBP9.41□□□□□ -0.9
TIMM9P3-201ENST00000428659 PDIA6Q15084 440 aa9.4□□□□□ -0.9
TIMM9P3-201ENST00000428659 JPH4Q96JJ6 628 aa9.4□□□□□ -0.9
TIMM9P3-201ENST00000428659 KCNK17Q96T54 332 aa9.4□□□□□ -0.9
TIMM9P3-201ENST00000428659 ZDHHC16Q969W1 377 aa9.39□□□□□ -0.91
TIMM9P3-201ENST00000428659 PSDA5PKW4 1024 aaPredicted RBP9.38□□□□□ -0.91
TIMM9P3-201ENST00000428659 COL9A1P20849 921 aa9.37□□□□□ -0.91
TIMM9P3-201ENST00000428659 PTGER2P43116 358 aa9.37□□□□□ -0.91
TIMM9P3-201ENST00000428659 BCL2L12Q9HB09 334 aa9.37□□□□□ -0.91
TIMM9P3-201ENST00000428659 PBX2P40425 430 aa9.36□□□□□ -0.91
TIMM9P3-201ENST00000428659 PHF14O94880 888 aa9.35□□□□□ -0.91
TIMM9P3-201ENST00000428659 RBM33Q96EV2 1170 aaKnown RBP9.35□□□□□ -0.91
TIMM9P3-201ENST00000428659 GRXCR2A6NFK2 248 aa9.34□□□□□ -0.91
TIMM9P3-201ENST00000428659 MLLT3P42568 568 aaPredicted RBP9.34□□□□□ -0.91
TIMM9P3-201ENST00000428659 ADGRD1Q6QNK2 874 aa9.34□□□□□ -0.91
TIMM9P3-201ENST00000428659 HRO43593 1189 aa9.33□□□□□ -0.92
TIMM9P3-201ENST00000428659 TSR1Q2NL82 804 aaKnown RBP9.33□□□□□ -0.92
TIMM9P3-201ENST00000428659 TYW1BQ6NUM6 668 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms