RNA–Protein interactions for RNA: ENST00000425174.1

HLA-S-202, Transcript of major histocompatibility complex, class I, S (pseudogene), humanhuman

BASIC

Gene HLA-S, Length 53 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-S-202ENST00000425174 SRRM2Q9UQ35 2752 aaKnown RBP-0.22□□□□□ -2.44
HLA-S-202ENST00000425174 SDK1Q7Z5N4 2213 aa-0.22□□□□□ -2.44
HLA-S-202ENST00000425174 USP9XQ93008 2570 aaPredicted RBP-0.22□□□□□ -2.44
HLA-S-202ENST00000425174 ZNF318Q5VUA4 2279 aa-0.22□□□□□ -2.44
HLA-S-202ENST00000425174 ERBB2P04626 1255 aa-0.22□□□□□ -2.44
HLA-S-202ENST00000425174 SUZ12Q15022 739 aaKnown RBP-0.22□□□□□ -2.44
HLA-S-202ENST00000425174 LCE1AQ5T7P2 110 aa-0.22□□□□□ -2.44
HLA-S-202ENST00000425174 CAAP1Q9H8G2 361 aa-0.22□□□□□ -2.44
HLA-S-202ENST00000425174 VWFP04275 2813 aa-0.22□□□□□ -2.44
HLA-S-202ENST00000425174 BAHCC1Q9P281 2608 aa-0.22□□□□□ -2.45
HLA-S-202ENST00000425174 ARID1AO14497 2285 aa-0.22□□□□□ -2.45
HLA-S-202ENST00000425174 IGF2RP11717 2491 aa-0.23□□□□□ -2.45
HLA-S-202ENST00000425174 CACNA1AO00555 2505 aa-0.23□□□□□ -2.45
HLA-S-202ENST00000425174 ZNF469Q96JG9 3925 aaPredicted RBP-0.23□□□□□ -2.45
HLA-S-202ENST00000425174 PRRC2AP48634 2157 aaKnown RBP-0.23□□□□□ -2.45
HLA-S-202ENST00000425174 KRT10P13645 584 aa-0.23□□□□□ -2.45
HLA-S-202ENST00000425174 COL9A3Q14050 684 aaPredicted RBP-0.23□□□□□ -2.45
HLA-S-202ENST00000425174 LCE5AQ5TCM9 118 aa-0.23□□□□□ -2.45
HLA-S-202ENST00000425174 KRTAP19-1Q8IUB9 90 aa-0.23□□□□□ -2.45
HLA-S-202ENST00000425174 SPRR2GQ9BYE4 73 aa-0.23□□□□□ -2.45
HLA-S-202ENST00000425174 HERC1Q15751 4861 aa-0.23□□□□□ -2.45
HLA-S-202ENST00000425174 JMJD1CQ15652 2540 aa-0.24□□□□□ -2.45
HLA-S-202ENST00000425174 HERC2O95714 4834 aa-0.24□□□□□ -2.45
HLA-S-202ENST00000425174 KMT2AQ03164 3969 aa-0.24□□□□□ -2.45
HLA-S-202ENST00000425174 CACNA1HO95180 2353 aa-0.24□□□□□ -2.45
HLA-S-202ENST00000425174 MGAM2Q2M2H8 2515 aa-0.24□□□□□ -2.45
HLA-S-202ENST00000425174 DSPP15924 2871 aaKnown RBP-0.25□□□□□ -2.45
HLA-S-202ENST00000425174 KRTAP10-1P60331 282 aa-0.25□□□□□ -2.45
HLA-S-202ENST00000425174 PCDH10Q9P2E7 1040 aa-0.25□□□□□ -2.45
HLA-S-202ENST00000425174 FLNAP21333 2647 aaKnown RBP-0.25□□□□□ -2.45
HLA-S-202ENST00000425174 CHD6Q8TD26 2715 aa-0.25□□□□□ -2.45
HLA-S-202ENST00000425174 FAT1Q14517 4588 aa-0.26□□□□□ -2.45
HLA-S-202ENST00000425174 BPTFQ12830 3046 aa-0.26□□□□□ -2.45
HLA-S-202ENST00000425174 KRTAP10-4P60372 401 aaPredicted RBP-0.26□□□□□ -2.45
HLA-S-202ENST00000425174 KRTAP20-1Q3LI63 56 aa-0.26□□□□□ -2.45
HLA-S-202ENST00000425174 ANKS1AQ92625 1134 aa-0.26□□□□□ -2.45
HLA-S-202ENST00000425174 MBD2Q9UBB5 411 aa-0.26□□□□□ -2.45
HLA-S-202ENST00000425174 LRP2P98164 4655 aa-0.26□□□□□ -2.45
HLA-S-202ENST00000425174 HELZ2Q9BYK8 2649 aaKnown RBP-0.26□□□□□ -2.45
HLA-S-202ENST00000425174 ATRXP46100 2492 aa-0.26□□□□□ -2.45
HLA-S-202ENST00000425174 SETXQ7Z333 2677 aaKnown RBP-0.27□□□□□ -2.45
HLA-S-202ENST00000425174 COL12A1Q99715 3063 aa-0.27□□□□□ -2.45
HLA-S-202ENST00000425174 POTEB3A0JP26 581 aa-0.27□□□□□ -2.45
HLA-S-202ENST00000425174 POTEBQ6S5H4 581 aa-0.27□□□□□ -2.45
HLA-S-202ENST00000425174 KHSRPQ92945 711 aaKnown RBP eCLIP-0.27□□□□□ -2.45
HLA-S-202ENST00000425174 SRP68Q9UHB9 627 aaKnown RBP-0.27□□□□□ -2.45
HLA-S-202ENST00000425174 STARD9Q9P2P6 4700 aa-0.27□□□□□ -2.45
HLA-S-202ENST00000425174 LAMA2P24043 3122 aaKnown RBP-0.27□□□□□ -2.45
HLA-S-202ENST00000425174 KRTAP10-6P60371 365 aaPredicted RBP-0.28□□□□□ -2.45
HLA-S-202ENST00000425174 KRTAP10-12P60413 245 aa-0.28□□□□□ -2.45
HLA-S-202ENST00000425174 EDAQ92838 391 aa-0.28□□□□□ -2.45
HLA-S-202ENST00000425174 ACACBO00763 2458 aa-0.28□□□□□ -2.45
HLA-S-202ENST00000425174 FN1P02751 2386 aaKnown RBP-0.28□□□□□ -2.45
HLA-S-202ENST00000425174 TGP01266 2768 aa-0.28□□□□□ -2.46
HLA-S-202ENST00000425174 HRNRQ86YZ3 2850 aaPredicted RBP-0.29□□□□□ -2.46
HLA-S-202ENST00000425174 APCP25054 2843 aa-0.29□□□□□ -2.46
HLA-S-202ENST00000425174 UBR5O95071 2799 aaPredicted RBP-0.29□□□□□ -2.46
HLA-S-202ENST00000425174 PSPNO60542 156 aa-0.29□□□□□ -2.46
HLA-S-202ENST00000425174 KRTAP10-2P60368 255 aa-0.29□□□□□ -2.46
HLA-S-202ENST00000425174 KRTAP10-8P60410 259 aa-0.29□□□□□ -2.46
HLA-S-202ENST00000425174 LCE3AQ5TA76 89 aa-0.29□□□□□ -2.46
HLA-S-202ENST00000425174 CCER1Q8TC90 406 aaPredicted RBP-0.29□□□□□ -2.46
HLA-S-202ENST00000425174 TAF15Q92804 592 aaKnown RBP eCLIP-0.29□□□□□ -2.46
HLA-S-202ENST00000425174 KCTD12Q96CX2 325 aaKnown RBP-0.29□□□□□ -2.46
HLA-S-202ENST00000425174 ALG13Q9NP73 1137 aaKnown RBP-0.29□□□□□ -2.46
HLA-S-202ENST00000425174 ZNF292O60281 2723 aa-0.29□□□□□ -2.46
HLA-S-202ENST00000425174 FLNBO75369 2602 aaKnown RBP-0.29□□□□□ -2.46
HLA-S-202ENST00000425174 NF1P21359 2839 aa-0.29□□□□□ -2.46
HLA-S-202ENST00000425174 OTOGQ6ZRI0 2925 aa-0.3□□□□□ -2.46
HLA-S-202ENST00000425174 MYO7AQ13402 2215 aa-0.3□□□□□ -2.46
HLA-S-202ENST00000425174 CCDC168Q8NDH2 2452 aa-0.3□□□□□ -2.46
HLA-S-202ENST00000425174 KRTAP10-3P60369 221 aa-0.3□□□□□ -2.46
HLA-S-202ENST00000425174 LCE4AQ5TA78 99 aa-0.3□□□□□ -2.46
HLA-S-202ENST00000425174 ZNF843Q8N446 348 aa-0.3□□□□□ -2.46
HLA-S-202ENST00000425174 BRWD1Q9NSI6 2320 aa-0.3□□□□□ -2.46
HLA-S-202ENST00000425174 DNHD1Q96M86 4753 aa-0.3□□□□□ -2.46
HLA-S-202ENST00000425174 FBLL1A6NHQ2 334 aaKnown RBP-0.31□□□□□ -2.46
HLA-S-202ENST00000425174 ITGB7P26010 798 aa-0.31□□□□□ -2.46
HLA-S-202ENST00000425174 PRB3Q04118 309 aaPredicted RBP-0.31□□□□□ -2.46
HLA-S-202ENST00000425174 LURAP1LQ8IV03 231 aa-0.31□□□□□ -2.46
HLA-S-202ENST00000425174 ZCCHC13Q8WW36 166 aaKnown RBP-0.31□□□□□ -2.46
HLA-S-202ENST00000425174 ANO8Q9HCE9 1232 aaPredicted RBP-0.31□□□□□ -2.46
HLA-S-202ENST00000425174 EGFL7Q9UHF1 273 aa-0.31□□□□□ -2.46
HLA-S-202ENST00000425174 ABCA12Q86UK0 2595 aa-0.31□□□□□ -2.46
HLA-S-202ENST00000425174 WDR87Q6ZQQ6 2873 aa-0.31□□□□□ -2.46
HLA-S-202ENST00000425174 POTEMA6NI47 508 aa-0.32□□□□□ -2.46
HLA-S-202ENST00000425174 KRT1P04264 644 aa-0.32□□□□□ -2.46
HLA-S-202ENST00000425174 KRTAP10-5P60370 271 aa-0.32□□□□□ -2.46
HLA-S-202ENST00000425174 LRCH2Q5VUJ6 765 aa-0.32□□□□□ -2.46
HLA-S-202ENST00000425174 KRT77Q7Z794 578 aa-0.32□□□□□ -2.46
HLA-S-202ENST00000425174 TMEM79Q9BSE2 394 aa-0.32□□□□□ -2.46
HLA-S-202ENST00000425174 ANKRD11Q6UB99 2663 aaPredicted RBP-0.32□□□□□ -2.46
HLA-S-202ENST00000425174 ATRQ13535 2644 aa-0.33□□□□□ -2.46
HLA-S-202ENST00000425174 CELSR3Q9NYQ7 3312 aa-0.33□□□□□ -2.46
HLA-S-202ENST00000425174 MYO9AB2RTY4 2548 aa-0.33□□□□□ -2.46
HLA-S-202ENST00000425174 ITPR3Q14573 2671 aa-0.33□□□□□ -2.46
HLA-S-202ENST00000425174 CNTRLQ7Z7A1 2325 aa-0.33□□□□□ -2.46
HLA-S-202ENST00000425174 POTEB2H3BUK9 544 aa-0.33□□□□□ -2.46
HLA-S-202ENST00000425174 KRT13P13646 458 aa-0.33□□□□□ -2.46
HLA-S-202ENST00000425174 KRTAP20-2Q3LI61 65 aa-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms