RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 PTPRKQ15262 1439 aa21.3■■□□□ 1
SEMA4D-204ENST00000420101 MIER1Q8N108 512 aa21.3■■□□□ 1
SEMA4D-204ENST00000420101 DHX57Q6P158 1386 aaKnown RBP21.29■■□□□ 1
SEMA4D-204ENST00000420101 ABCC10Q5T3U5 1492 aa21.27■■□□□ 1
SEMA4D-204ENST00000420101 ZCCHC11Q5TAX3 1644 aaKnown RBP21.27■■□□□ 1
SEMA4D-204ENST00000420101 RRP7BPQ9NSQ0 103 aa21.27■□□□□ 0.99
SEMA4D-204ENST00000420101 KDM5BQ9UGL1 1544 aa21.26■□□□□ 0.99
SEMA4D-204ENST00000420101 YTHDC1Q96MU7 727 aaKnown RBP21.26■□□□□ 0.99
SEMA4D-204ENST00000420101 CAMSAP2Q08AD1 1489 aa21.25■□□□□ 0.99
SEMA4D-204ENST00000420101 NPM1P06748 294 aaKnown RBP eCLIP21.24■□□□□ 0.99
SEMA4D-204ENST00000420101 HFM1A2PYH4 1435 aa21.23■□□□□ 0.99
SEMA4D-204ENST00000420101 DAPK1P53355 1430 aa21.23■□□□□ 0.99
SEMA4D-204ENST00000420101 CDC42BPAQ5VT25 1732 aa21.19■□□□□ 0.98
SEMA4D-204ENST00000420101 ABCC5O15440 1437 aa21.19■□□□□ 0.98
SEMA4D-204ENST00000420101 ANP32EQ9BTT0 268 aa21.19■□□□□ 0.98
SEMA4D-204ENST00000420101 NAIPQ13075 1403 aa21.18■□□□□ 0.98
SEMA4D-204ENST00000420101 DNMT1P26358 1616 aaKnown RBP21.18■□□□□ 0.98
SEMA4D-204ENST00000420101 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.17■□□□□ 0.98
SEMA4D-204ENST00000420101 TTC37Q6PGP7 1564 aa21.15■□□□□ 0.98
SEMA4D-204ENST00000420101 ARHGAP5Q13017 1502 aa21.14■□□□□ 0.98
SEMA4D-204ENST00000420101 HNRNPMP52272 730 aaKnown RBP eCLIP21.13■□□□□ 0.97
SEMA4D-204ENST00000420101 TSPY4P0CV99 314 aa21.12■□□□□ 0.97
SEMA4D-204ENST00000420101 TSPY10P0CW01 314 aa21.12■□□□□ 0.97
SEMA4D-204ENST00000420101 TRIM52Q96A61 297 aa21.12■□□□□ 0.97
SEMA4D-204ENST00000420101 SUPT16HQ9Y5B9 1047 aaKnown RBP21.12■□□□□ 0.97
SEMA4D-204ENST00000420101 ROCK1Q13464 1354 aa21.12■□□□□ 0.97
SEMA4D-204ENST00000420101 WDR7Q9Y4E6 1490 aa21.12■□□□□ 0.97
SEMA4D-204ENST00000420101 AKNAQ7Z591 1439 aa21.12■□□□□ 0.97
SEMA4D-204ENST00000420101 PREX2Q70Z35 1606 aa21.12■□□□□ 0.97
SEMA4D-204ENST00000420101 ASXL2Q76L83 1435 aa21.09■□□□□ 0.97
SEMA4D-204ENST00000420101 CYB5RLQ6IPT4 315 aa21.08■□□□□ 0.97
SEMA4D-204ENST00000420101 EFCAB2Q5VUJ9 269 aa21.08■□□□□ 0.96
SEMA4D-204ENST00000420101 MYO5CQ9NQX4 1742 aa21.07■□□□□ 0.96
SEMA4D-204ENST00000420101 CDC42BPBQ9Y5S2 1711 aa21.07■□□□□ 0.96
SEMA4D-204ENST00000420101 GCC2Q8IWJ2 1684 aa21.07■□□□□ 0.96
SEMA4D-204ENST00000420101 ANKRD30AQ9BXX3 1397 aa21.07■□□□□ 0.96
SEMA4D-204ENST00000420101 PLCH2O75038 1416 aa21.06■□□□□ 0.96
SEMA4D-204ENST00000420101 SAMD9LQ8IVG5 1584 aa21.05■□□□□ 0.96
SEMA4D-204ENST00000420101 RSPH4AQ5TD94 716 aa21.05■□□□□ 0.96
SEMA4D-204ENST00000420101 C9orf84Q5VXU9 1444 aa21.03■□□□□ 0.96
SEMA4D-204ENST00000420101 MAPKBP1O60336 1514 aa21.02■□□□□ 0.96
SEMA4D-204ENST00000420101 NCOA1Q15788 1441 aa21.02■□□□□ 0.96
SEMA4D-204ENST00000420101 CCDC141Q6ZP82 1450 aa21.02■□□□□ 0.95
SEMA4D-204ENST00000420101 PLEKHH2Q8IVE3 1493 aa21.02■□□□□ 0.95
SEMA4D-204ENST00000420101 CROCC2H7BZ55 1655 aa21.01■□□□□ 0.95
SEMA4D-204ENST00000420101 SYCP2Q9BX26 1530 aa21■□□□□ 0.95
SEMA4D-204ENST00000420101 ADGBQ8N7X0 1667 aa21■□□□□ 0.95
SEMA4D-204ENST00000420101 ARHGEF5Q12774 1597 aa21■□□□□ 0.95
SEMA4D-204ENST00000420101 MBD5Q9P267 1494 aa21■□□□□ 0.95
SEMA4D-204ENST00000420101 SHANK2Q9UPX8 1470 aa21■□□□□ 0.95
SEMA4D-204ENST00000420101 TSHZ2Q9NRE2 1034 aa20.99■□□□□ 0.95
SEMA4D-204ENST00000420101 ADGRL2O95490 1459 aa20.99■□□□□ 0.95
SEMA4D-204ENST00000420101 KDM6BO15054 1643 aa20.99■□□□□ 0.95
SEMA4D-204ENST00000420101 RIMBP3CA6NJZ7 1639 aa20.98■□□□□ 0.95
SEMA4D-204ENST00000420101 RIMBP3BA6NNM3 1639 aa20.98■□□□□ 0.95
SEMA4D-204ENST00000420101 RIMBP3Q9UFD9 1639 aa20.98■□□□□ 0.95
SEMA4D-204ENST00000420101 SIN3AQ96ST3 1273 aa20.97■□□□□ 0.95
SEMA4D-204ENST00000420101 KIAA1107Q9UPP5 1409 aa20.96■□□□□ 0.95
SEMA4D-204ENST00000420101 BCL11AQ9H165 835 aa20.95■□□□□ 0.94
SEMA4D-204ENST00000420101 KIF15Q9NS87 1388 aa20.93■□□□□ 0.94
SEMA4D-204ENST00000420101 MPHOSPH9Q99550 1183 aa20.93■□□□□ 0.94
SEMA4D-204ENST00000420101 ABCA9Q8IUA7 1624 aa20.93■□□□□ 0.94
SEMA4D-204ENST00000420101 ANKRD50Q9ULJ7 1429 aa20.93■□□□□ 0.94
SEMA4D-204ENST00000420101 FANCAO15360 1455 aa20.91■□□□□ 0.94
SEMA4D-204ENST00000420101 ARAP3Q8WWN8 1544 aa20.91■□□□□ 0.94
SEMA4D-204ENST00000420101 SLC4A1APQ9BWU0 796 aaKnown RBP20.9■□□□□ 0.94
SEMA4D-204ENST00000420101 MYT1LQ9UL68 1186 aa20.9■□□□□ 0.94
SEMA4D-204ENST00000420101 ABCC1P33527 1531 aa20.89■□□□□ 0.93
SEMA4D-204ENST00000420101 ARHGEF12Q9NZN5 1544 aa20.89■□□□□ 0.93
SEMA4D-204ENST00000420101 CD109Q6YHK3 1445 aa20.87■□□□□ 0.93
SEMA4D-204ENST00000420101 TRAPPC8Q9Y2L5 1435 aa20.86■□□□□ 0.93
SEMA4D-204ENST00000420101 AFAP1Q8N556 730 aa20.85■□□□□ 0.93
SEMA4D-204ENST00000420101 SPAG9O60271 1321 aaKnown RBP20.85■□□□□ 0.93
SEMA4D-204ENST00000420101 FOXD1Q16676 465 aa20.85■□□□□ 0.93
SEMA4D-204ENST00000420101 ADGRL1O94910 1474 aa20.83■□□□□ 0.93
SEMA4D-204ENST00000420101 MAST1Q9Y2H9 1570 aa20.83■□□□□ 0.93
SEMA4D-204ENST00000420101 SCAPERQ9BY12 1400 aa20.83■□□□□ 0.92
SEMA4D-204ENST00000420101 TONSLQ96HA7 1378 aa20.83■□□□□ 0.92
SEMA4D-204ENST00000420101 NUP155O75694 1391 aa20.81■□□□□ 0.92
SEMA4D-204ENST00000420101 TIMELESSQ9UNS1 1208 aa20.81■□□□□ 0.92
SEMA4D-204ENST00000420101 DENND4BO75064 1496 aaPredicted RBP20.77■□□□□ 0.92
SEMA4D-204ENST00000420101 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.77■□□□□ 0.92
SEMA4D-204ENST00000420101 PKD2Q13563 968 aa20.76■□□□□ 0.91
SEMA4D-204ENST00000420101 PZPP20742 1482 aa20.76■□□□□ 0.91
SEMA4D-204ENST00000420101 PLXNC1O60486 1568 aa20.76■□□□□ 0.91
SEMA4D-204ENST00000420101 FAM69CQ0P6D2 419 aa20.75■□□□□ 0.91
SEMA4D-204ENST00000420101 DUOX2Q9NRD8 1548 aa20.75■□□□□ 0.91
SEMA4D-204ENST00000420101 RTEL1-TNFRSF6BF6WH68 1400 aa20.74■□□□□ 0.91
SEMA4D-204ENST00000420101 CFAP74Q9C0B2 1584 aa20.74■□□□□ 0.91
SEMA4D-204ENST00000420101 ANKRD30BQ9BXX2 1392 aa20.7■□□□□ 0.9
SEMA4D-204ENST00000420101 ERBINQ96RT1 1412 aa20.7■□□□□ 0.9
SEMA4D-204ENST00000420101 PPP1R15AO75807 674 aaPredicted RBP20.7■□□□□ 0.9
SEMA4D-204ENST00000420101 ZFYVE16Q7Z3T8 1539 aa20.69■□□□□ 0.9
SEMA4D-204ENST00000420101 ZNF518AQ6AHZ1 1483 aa20.69■□□□□ 0.9
SEMA4D-204ENST00000420101 ATP7AQ04656 1500 aa20.69■□□□□ 0.9
SEMA4D-204ENST00000420101 NEO1Q92859 1461 aa20.67■□□□□ 0.9
SEMA4D-204ENST00000420101 KDM5DQ9BY66 1539 aa20.66■□□□□ 0.9
SEMA4D-204ENST00000420101 GLI2P10070 1586 aa20.65■□□□□ 0.9
SEMA4D-204ENST00000420101 POGZQ7Z3K3 1410 aa20.64■□□□□ 0.89
SEMA4D-204ENST00000420101 FAM135AQ9P2D6 1515 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms