RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 SSUH2Q9Y2M2 353 aa10.79□□□□□ -0.68
CPS1-202ENST00000417946 ARHGEF11O15085 1522 aa10.79□□□□□ -0.68
CPS1-202ENST00000417946 EPRSP07814 1512 aaKnown RBP10.79□□□□□ -0.68
CPS1-202ENST00000417946 CDK13Q14004 1512 aaKnown RBP10.79□□□□□ -0.68
CPS1-202ENST00000417946 PTPRGP23470 1445 aa10.77□□□□□ -0.68
CPS1-202ENST00000417946 ABCC2Q92887 1545 aa10.77□□□□□ -0.69
CPS1-202ENST00000417946 RIMBP3CA6NJZ7 1639 aa10.76□□□□□ -0.69
CPS1-202ENST00000417946 RIMBP3BA6NNM3 1639 aa10.76□□□□□ -0.69
CPS1-202ENST00000417946 ADCY10Q96PN6 1610 aa10.76□□□□□ -0.69
CPS1-202ENST00000417946 RIMBP3Q9UFD9 1639 aa10.76□□□□□ -0.69
CPS1-202ENST00000417946 UHRF1BP1LA0JNW5 1464 aa10.75□□□□□ -0.69
CPS1-202ENST00000417946 CCDC18Q5T9S5 1454 aa10.75□□□□□ -0.69
CPS1-202ENST00000417946 LRRC9Q6ZRR7 1453 aa10.75□□□□□ -0.69
CPS1-202ENST00000417946 KANK4Q5T7N3 995 aaPredicted RBP10.75□□□□□ -0.69
CPS1-202ENST00000417946 UACAQ9BZF9 1416 aa10.75□□□□□ -0.69
CPS1-202ENST00000417946 PPARGC1BQ86YN6 1023 aaKnown RBP10.73□□□□□ -0.69
CPS1-202ENST00000417946 ATP10BO94823 1461 aa10.72□□□□□ -0.69
CPS1-202ENST00000417946 EHBP1L1Q8N3D4 1523 aa10.72□□□□□ -0.69
CPS1-202ENST00000417946 ZCCHC11Q5TAX3 1644 aaKnown RBP10.71□□□□□ -0.69
CPS1-202ENST00000417946 TTBK1Q5TCY1 1321 aaPredicted RBP10.71□□□□□ -0.69
CPS1-202ENST00000417946 KDM5BQ9UGL1 1544 aa10.71□□□□□ -0.69
CPS1-202ENST00000417946 PRKAR2AP13861 404 aaKnown RBP10.7□□□□□ -0.7
CPS1-202ENST00000417946 DNAJC5Q9H3Z4 198 aa10.69□□□□□ -0.7
CPS1-202ENST00000417946 PRR29P0C7W0 189 aa10.68□□□□□ -0.7
CPS1-202ENST00000417946 KIF14Q15058 1648 aa10.68□□□□□ -0.7
CPS1-202ENST00000417946 ARID3CA6NKF2 412 aa10.67□□□□□ -0.7
CPS1-202ENST00000417946 SUPT6HQ7KZ85 1726 aaKnown RBP10.67□□□□□ -0.7
CPS1-202ENST00000417946 NCOA2Q15596 1464 aa10.66□□□□□ -0.7
CPS1-202ENST00000417946 TROQ12816 1431 aaPredicted RBP10.66□□□□□ -0.7
CPS1-202ENST00000417946 PHLDB1Q86UU1 1377 aa10.65□□□□□ -0.7
CPS1-202ENST00000417946 ATP1B4Q9UN42 357 aaPredicted RBP10.65□□□□□ -0.7
CPS1-202ENST00000417946 ABCC10Q5T3U5 1492 aa10.64□□□□□ -0.71
CPS1-202ENST00000417946 RRBP1Q9P2E9 1410 aaKnown RBP10.63□□□□□ -0.71
CPS1-202ENST00000417946 MTUS2Q5JR59 1369 aa10.63□□□□□ -0.71
CPS1-202ENST00000417946 TTC37Q6PGP7 1564 aa10.61□□□□□ -0.71
CPS1-202ENST00000417946 CDC42BPAQ5VT25 1732 aa10.61□□□□□ -0.71
CPS1-202ENST00000417946 MYOM3Q5VTT5 1437 aa10.59□□□□□ -0.71
CPS1-202ENST00000417946 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.58□□□□□ -0.72
CPS1-202ENST00000417946 WDR7Q9Y4E6 1490 aa10.58□□□□□ -0.72
CPS1-202ENST00000417946 MAPKBP1O60336 1514 aa10.58□□□□□ -0.72
CPS1-202ENST00000417946 FGD6Q6ZV73 1430 aa10.58□□□□□ -0.72
CPS1-202ENST00000417946 ITSN2Q9NZM3 1697 aa10.57□□□□□ -0.72
CPS1-202ENST00000417946 TCOF1Q13428 1488 aaKnown RBP10.57□□□□□ -0.72
CPS1-202ENST00000417946 TRIM26Q12899 539 aaPredicted RBP10.57□□□□□ -0.72
CPS1-202ENST00000417946 CDC42BPBQ9Y5S2 1711 aa10.57□□□□□ -0.72
CPS1-202ENST00000417946 PREX2Q70Z35 1606 aa10.57□□□□□ -0.72
CPS1-202ENST00000417946 GPATCH8Q9UKJ3 1502 aaKnown RBP10.57□□□□□ -0.72
CPS1-202ENST00000417946 ASXL2Q76L83 1435 aa10.57□□□□□ -0.72
CPS1-202ENST00000417946 ABCA9Q8IUA7 1624 aa10.56□□□□□ -0.72
CPS1-202ENST00000417946 PTPN23Q9H3S7 1636 aa10.55□□□□□ -0.72
CPS1-202ENST00000417946 STAG3Q9UJ98 1225 aa10.55□□□□□ -0.72
CPS1-202ENST00000417946 CCNB3Q8WWL7 1395 aa10.54□□□□□ -0.72
CPS1-202ENST00000417946 CYB5RLQ6IPT4 315 aa10.54□□□□□ -0.72
CPS1-202ENST00000417946 MYO5CQ9NQX4 1742 aa10.54□□□□□ -0.72
CPS1-202ENST00000417946 CDK11AQ9UQ88 783 aaPredicted RBP10.54□□□□□ -0.72
CPS1-202ENST00000417946 PLEKHD1A6NEE1 506 aa10.53□□□□□ -0.72
CPS1-202ENST00000417946 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.52□□□□□ -0.72
CPS1-202ENST00000417946 MIA2Q96PC5 1412 aa10.52□□□□□ -0.73
CPS1-202ENST00000417946 SAMD9LQ8IVG5 1584 aa10.52□□□□□ -0.73
CPS1-202ENST00000417946 CHADLQ6NUI6 762 aa10.51□□□□□ -0.73
CPS1-202ENST00000417946 PCGF6Q9BYE7 350 aa10.51□□□□□ -0.73
CPS1-202ENST00000417946 ARAP3Q8WWN8 1544 aa10.51□□□□□ -0.73
CPS1-202ENST00000417946 DIP2BQ9P265 1576 aa10.51□□□□□ -0.73
CPS1-202ENST00000417946 CAMSAP2Q08AD1 1489 aa10.5□□□□□ -0.73
CPS1-202ENST00000417946 GLI2P10070 1586 aa10.5□□□□□ -0.73
CPS1-202ENST00000417946 PTPRKQ15262 1439 aa10.5□□□□□ -0.73
CPS1-202ENST00000417946 DNMT1P26358 1616 aaKnown RBP10.49□□□□□ -0.73
CPS1-202ENST00000417946 MAP3K4Q9Y6R4 1608 aa10.49□□□□□ -0.73
CPS1-202ENST00000417946 C19orf67A6NJJ6 358 aa10.49□□□□□ -0.73
CPS1-202ENST00000417946 CROCC2H7BZ55 1655 aa10.49□□□□□ -0.73
CPS1-202ENST00000417946 KIF13AQ9H1H9 1805 aa10.49□□□□□ -0.73
CPS1-202ENST00000417946 SPDYE4A6NLX3 237 aa10.48□□□□□ -0.73
CPS1-202ENST00000417946 PPRC1Q5VV67 1664 aaKnown RBP10.47□□□□□ -0.73
CPS1-202ENST00000417946 ZNF644Q9H582 1327 aaPredicted RBP10.47□□□□□ -0.73
CPS1-202ENST00000417946 PLCH2O75038 1416 aa10.47□□□□□ -0.73
CPS1-202ENST00000417946 MBD5Q9P267 1494 aa10.46□□□□□ -0.74
CPS1-202ENST00000417946 ABCC1P33527 1531 aa10.46□□□□□ -0.74
CPS1-202ENST00000417946 ARHGEF12Q9NZN5 1544 aa10.46□□□□□ -0.74
CPS1-202ENST00000417946 ARHGEF5Q12774 1597 aa10.45□□□□□ -0.74
CPS1-202ENST00000417946 ARHGAP5Q13017 1502 aa10.45□□□□□ -0.74
CPS1-202ENST00000417946 NPM1P06748 294 aaKnown RBP eCLIP10.45□□□□□ -0.74
CPS1-202ENST00000417946 KCNH8Q96L42 1107 aa10.45□□□□□ -0.74
CPS1-202ENST00000417946 SYCP2Q9BX26 1530 aa10.44□□□□□ -0.74
CPS1-202ENST00000417946 ABCC5O15440 1437 aa10.44□□□□□ -0.74
CPS1-202ENST00000417946 SLC24A1O60721 1099 aa10.44□□□□□ -0.74
CPS1-202ENST00000417946 EVX2Q03828 476 aa10.44□□□□□ -0.74
CPS1-202ENST00000417946 DAPK1P53355 1430 aa10.43□□□□□ -0.74
CPS1-202ENST00000417946 GCC2Q8IWJ2 1684 aa10.42□□□□□ -0.74
CPS1-202ENST00000417946 ADGBQ8N7X0 1667 aa10.42□□□□□ -0.74
CPS1-202ENST00000417946 CLCN6P51797 869 aa10.42□□□□□ -0.74
CPS1-202ENST00000417946 FAM50AQ14320 339 aaKnown RBP10.42□□□□□ -0.74
CPS1-202ENST00000417946 CFDP1Q9UEE9 299 aaPredicted RBP10.42□□□□□ -0.74
CPS1-202ENST00000417946 FARP1Q9Y4F1 1045 aaPredicted RBP10.42□□□□□ -0.74
CPS1-202ENST00000417946 SHANK2Q9UPX8 1470 aa10.42□□□□□ -0.74
CPS1-202ENST00000417946 FANCAO15360 1455 aa10.41□□□□□ -0.74
CPS1-202ENST00000417946 KIAA1107Q9UPP5 1409 aa10.41□□□□□ -0.74
CPS1-202ENST00000417946 MAST1Q9Y2H9 1570 aa10.4□□□□□ -0.74
CPS1-202ENST00000417946 ADGRL2O95490 1459 aa10.4□□□□□ -0.74
CPS1-202ENST00000417946 CD109Q6YHK3 1445 aa10.4□□□□□ -0.75
CPS1-202ENST00000417946 AKNAQ7Z591 1439 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms