RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 EHBP1L1Q8N3D4 1523 aa16.64■□□□□ 0.25
HDLBP-206ENST00000417540 TIAM1Q13009 1591 aa16.64■□□□□ 0.25
HDLBP-206ENST00000417540 SAMD9LQ8IVG5 1584 aa16.63■□□□□ 0.25
HDLBP-206ENST00000417540 AKNAQ7Z591 1439 aa16.62■□□□□ 0.25
HDLBP-206ENST00000417540 PLEKHD1A6NEE1 506 aa16.62■□□□□ 0.25
HDLBP-206ENST00000417540 POGZQ7Z3K3 1410 aa16.62■□□□□ 0.25
HDLBP-206ENST00000417540 PLCH2O75038 1416 aa16.61■□□□□ 0.25
HDLBP-206ENST00000417540 ABCA6Q8N139 1617 aa16.59■□□□□ 0.25
HDLBP-206ENST00000417540 DENND4BO75064 1496 aaPredicted RBP16.59■□□□□ 0.25
HDLBP-206ENST00000417540 ZFYVE16Q7Z3T8 1539 aa16.59■□□□□ 0.25
HDLBP-206ENST00000417540 KDM5CP41229 1560 aa16.59■□□□□ 0.25
HDLBP-206ENST00000417540 RAPGEF3O95398 923 aa16.58■□□□□ 0.24
HDLBP-206ENST00000417540 YEATS2Q9ULM3 1422 aa16.58■□□□□ 0.24
HDLBP-206ENST00000417540 BCORL1Q5H9F3 1711 aa16.58■□□□□ 0.24
HDLBP-206ENST00000417540 MADDQ8WXG6 1647 aa16.57■□□□□ 0.24
HDLBP-206ENST00000417540 SYCP2Q9BX26 1530 aa16.57■□□□□ 0.24
HDLBP-206ENST00000417540 ARHGEF12Q9NZN5 1544 aa16.57■□□□□ 0.24
HDLBP-206ENST00000417540 VPS8Q8N3P4 1428 aa16.57■□□□□ 0.24
HDLBP-206ENST00000417540 HECW2Q9P2P5 1572 aa16.56■□□□□ 0.24
HDLBP-206ENST00000417540 ADAMTSL3P82987 1691 aa16.56■□□□□ 0.24
HDLBP-206ENST00000417540 DIP2CQ9Y2E4 1556 aa16.55■□□□□ 0.24
HDLBP-206ENST00000417540 SUPT6HQ7KZ85 1726 aaKnown RBP16.54■□□□□ 0.24
HDLBP-206ENST00000417540 SCAPERQ9BY12 1400 aa16.53■□□□□ 0.24
HDLBP-206ENST00000417540 RIMS1Q86UR5 1692 aaKnown RBP16.53■□□□□ 0.24
HDLBP-206ENST00000417540 PHLDB1Q86UU1 1377 aa16.51■□□□□ 0.23
HDLBP-206ENST00000417540 GPATCH8Q9UKJ3 1502 aaKnown RBP16.51■□□□□ 0.23
HDLBP-206ENST00000417540 KIDINS220Q9ULH0 1771 aa16.51■□□□□ 0.23
HDLBP-206ENST00000417540 FER1L4A9Z1Z3 1794 aa16.49■□□□□ 0.23
HDLBP-206ENST00000417540 INO80Q9ULG1 1556 aaPredicted RBP16.49■□□□□ 0.23
HDLBP-206ENST00000417540 TRAPPC8Q9Y2L5 1435 aa16.49■□□□□ 0.23
HDLBP-206ENST00000417540 ZNF518AQ6AHZ1 1483 aa16.48■□□□□ 0.23
HDLBP-206ENST00000417540 MTUS2Q5JR59 1369 aa16.48■□□□□ 0.23
HDLBP-206ENST00000417540 CDK11AQ9UQ88 783 aaPredicted RBP16.47■□□□□ 0.23
HDLBP-206ENST00000417540 NCOA2Q15596 1464 aa16.47■□□□□ 0.23
HDLBP-206ENST00000417540 LRRC9Q6ZRR7 1453 aa16.44■□□□□ 0.22
HDLBP-206ENST00000417540 ADGBQ8N7X0 1667 aa16.43■□□□□ 0.22
HDLBP-206ENST00000417540 C9orf84Q5VXU9 1444 aa16.42■□□□□ 0.22
HDLBP-206ENST00000417540 CAMSAP2Q08AD1 1489 aa16.42■□□□□ 0.22
HDLBP-206ENST00000417540 REREQ9P2R6 1566 aa16.41■□□□□ 0.22
HDLBP-206ENST00000417540 MAGI2Q86UL8 1455 aa16.41■□□□□ 0.22
HDLBP-206ENST00000417540 ATP7AQ04656 1500 aa16.4■□□□□ 0.22
HDLBP-206ENST00000417540 CCNB3Q8WWL7 1395 aa16.39■□□□□ 0.21
HDLBP-206ENST00000417540 PLXNC1O60486 1568 aa16.39■□□□□ 0.21
HDLBP-206ENST00000417540 EFCAB2Q5VUJ9 269 aa16.39■□□□□ 0.21
HDLBP-206ENST00000417540 CROCC2H7BZ55 1655 aa16.37■□□□□ 0.21
HDLBP-206ENST00000417540 PTPRMP28827 1452 aa16.37■□□□□ 0.21
HDLBP-206ENST00000417540 MAP3K1Q13233 1512 aa16.37■□□□□ 0.21
HDLBP-206ENST00000417540 MLH3Q9UHC1 1453 aa16.36■□□□□ 0.21
HDLBP-206ENST00000417540 AFAP1Q8N556 730 aa16.36■□□□□ 0.21
HDLBP-206ENST00000417540 ATP10AO60312 1499 aa16.35■□□□□ 0.21
HDLBP-206ENST00000417540 KANK4Q5T7N3 995 aaPredicted RBP16.34■□□□□ 0.21
HDLBP-206ENST00000417540 ZNF777Q9ULD5 760 aaPredicted RBP16.34■□□□□ 0.21
HDLBP-206ENST00000417540 ZNF644Q9H582 1327 aaPredicted RBP16.34■□□□□ 0.21
HDLBP-206ENST00000417540 MBD5Q9P267 1494 aa16.34■□□□□ 0.21
HDLBP-206ENST00000417540 PLEKHH2Q8IVE3 1493 aa16.32■□□□□ 0.2
HDLBP-206ENST00000417540 C3P01024 1663 aa16.31■□□□□ 0.2
HDLBP-206ENST00000417540 ARHGEF5Q12774 1597 aa16.3■□□□□ 0.2
HDLBP-206ENST00000417540 CCDC141Q6ZP82 1450 aa16.3■□□□□ 0.2
HDLBP-206ENST00000417540 ARID4BQ4LE39 1312 aaPredicted RBP16.3■□□□□ 0.2
HDLBP-206ENST00000417540 KIAA1107Q9UPP5 1409 aa16.29■□□□□ 0.2
HDLBP-206ENST00000417540 PTPN23Q9H3S7 1636 aa16.29■□□□□ 0.2
HDLBP-206ENST00000417540 AGLP35573 1532 aa16.29■□□□□ 0.2
HDLBP-206ENST00000417540 HNRNPMP52272 730 aaKnown RBP eCLIP16.28■□□□□ 0.24e-7■■■■■ 30
HDLBP-206ENST00000417540 CFDP1Q9UEE9 299 aaPredicted RBP16.28■□□□□ 0.2
HDLBP-206ENST00000417540 CLTCQ00610 1675 aaKnown RBP16.27■□□□□ 0.2
HDLBP-206ENST00000417540 MLECQ14165 292 aa16.27■□□□□ 0.2
HDLBP-206ENST00000417540 MYOM3Q5VTT5 1437 aa16.27■□□□□ 0.19
HDLBP-206ENST00000417540 MAST1Q9Y2H9 1570 aa16.26■□□□□ 0.19
HDLBP-206ENST00000417540 LMTK3Q96Q04 1460 aa16.25■□□□□ 0.19
HDLBP-206ENST00000417540 PREX1Q8TCU6 1659 aa16.24■□□□□ 0.19
HDLBP-206ENST00000417540 A2MP01023 1474 aa16.23■□□□□ 0.19
HDLBP-206ENST00000417540 MROH2AA6NES4 1674 aa16.23■□□□□ 0.19
HDLBP-206ENST00000417540 DNMT1P26358 1616 aaKnown RBP16.23■□□□□ 0.19
HDLBP-206ENST00000417540 SPAG9O60271 1321 aaKnown RBP16.21■□□□□ 0.19
HDLBP-206ENST00000417540 PLPPR3Q6T4P5 718 aa16.21■□□□□ 0.19
HDLBP-206ENST00000417540 MYT1LQ9UL68 1186 aa16.21■□□□□ 0.19
HDLBP-206ENST00000417540 MROH1Q8NDA8 1641 aa16.19■□□□□ 0.18
HDLBP-206ENST00000417540 FGD6Q6ZV73 1430 aa16.19■□□□□ 0.18
HDLBP-206ENST00000417540 TCOF1Q13428 1488 aaKnown RBP16.18■□□□□ 0.18
HDLBP-206ENST00000417540 CEP152O94986 1710 aa16.18■□□□□ 0.18
HDLBP-206ENST00000417540 RNF17Q9BXT8 1623 aaKnown RBP16.18■□□□□ 0.18
HDLBP-206ENST00000417540 MYO3AQ8NEV4 1616 aa16.17■□□□□ 0.18
HDLBP-206ENST00000417540 FBXO41Q8TF61 875 aa16.17■□□□□ 0.18
HDLBP-206ENST00000417540 MIA2Q96PC5 1412 aa16.16■□□□□ 0.18
HDLBP-206ENST00000417540 EIF2AK4Q9P2K8 1649 aaKnown RBP16.15■□□□□ 0.18
HDLBP-206ENST00000417540 SHANK2Q9UPX8 1470 aa16.15■□□□□ 0.18
HDLBP-206ENST00000417540 RTEL1-TNFRSF6BF6WH68 1400 aa16.14■□□□□ 0.17
HDLBP-206ENST00000417540 DAPK1P53355 1430 aa16.12■□□□□ 0.17
HDLBP-206ENST00000417540 ZNF142P52746 1687 aaPredicted RBP16.12■□□□□ 0.17
HDLBP-206ENST00000417540 ABCC5O15440 1437 aa16.11■□□□□ 0.17
HDLBP-206ENST00000417540 KDM5DQ9BY66 1539 aa16.11■□□□□ 0.17
HDLBP-206ENST00000417540 CEBPAP49715 358 aaPredicted RBP16.11■□□□□ 0.17
HDLBP-206ENST00000417540 DEPDC5O75140 1603 aa16.09■□□□□ 0.17
HDLBP-206ENST00000417540 ZC3H13Q5T200 1668 aaKnown RBP16.09■□□□□ 0.17
HDLBP-206ENST00000417540 CAMSAP1Q5T5Y3 1602 aa16.08■□□□□ 0.17
HDLBP-206ENST00000417540 STRCQ7RTU9 1775 aa16.08■□□□□ 0.17
HDLBP-206ENST00000417540 PRDM15P57071 1507 aaPredicted RBP16.08■□□□□ 0.16
HDLBP-206ENST00000417540 ABCC3O15438 1527 aa16.07■□□□□ 0.16
HDLBP-206ENST00000417540 PPARGC1BQ86YN6 1023 aaKnown RBP16.06■□□□□ 0.16
HDLBP-206ENST00000417540 DUOX2Q9NRD8 1548 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms