RNA–Protein interactions for RNA: ENST00000416343.2

LINC01349-201, Transcript of long intergenic non-protein coding RNA 1349, humanhuman

TSL 3 BASIC

Gene LINC01349, Length 497 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01349-201ENST00000416343 MYT1LQ9UL68 1186 aa7.11□□□□□ -1.27
LINC01349-201ENST00000416343 ZSWIM6Q9HCJ5 1215 aa7.09□□□□□ -1.27
LINC01349-201ENST00000416343 GPR153Q6NV75 609 aa7.08□□□□□ -1.28
LINC01349-201ENST00000416343 ZNF710Q8N1W2 664 aa7.08□□□□□ -1.28
LINC01349-201ENST00000416343 BCL11BQ9C0K0 894 aaPredicted RBP7.07□□□□□ -1.28
LINC01349-201ENST00000416343 NLRP6P59044 892 aa7.06□□□□□ -1.28
LINC01349-201ENST00000416343 MFRPQ9BY79 579 aa7.06□□□□□ -1.28
LINC01349-201ENST00000416343 IRX2Q9BZI1 471 aaPredicted RBP7.06□□□□□ -1.28
LINC01349-201ENST00000416343 RIMBP2O15034 1052 aa7.05□□□□□ -1.28
LINC01349-201ENST00000416343 TAOK2Q9UL54 1235 aa7.05□□□□□ -1.28
LINC01349-201ENST00000416343 PKD2Q13563 968 aa7.04□□□□□ -1.28
LINC01349-201ENST00000416343 PLA2G2EQ9NZK7 142 aa7.04□□□□□ -1.28
LINC01349-201ENST00000416343 ERBB3P21860 1342 aa7.03□□□□□ -1.28
LINC01349-201ENST00000416343 KIF3CO14782 793 aa7.03□□□□□ -1.28
LINC01349-201ENST00000416343 VARS2Q5ST30 1063 aaKnown RBP7.02□□□□□ -1.29
LINC01349-201ENST00000416343 STK24Q9Y6E0 443 aa7.01□□□□□ -1.29
LINC01349-201ENST00000416343 RGL2O15211 777 aa7□□□□□ -1.29
LINC01349-201ENST00000416343 ECM2O94769 699 aaPredicted RBP7□□□□□ -1.29
LINC01349-201ENST00000416343 ZNF687Q8N1G0 1237 aa7□□□□□ -1.29
LINC01349-201ENST00000416343 STK25O00506 426 aa6.99□□□□□ -1.29
LINC01349-201ENST00000416343 ARSIQ5FYB1 569 aa6.98□□□□□ -1.29
LINC01349-201ENST00000416343 C2orf72A6NCS6 295 aa6.96□□□□□ -1.3
LINC01349-201ENST00000416343 SLC34A2O95436 690 aa6.95□□□□□ -1.3
LINC01349-201ENST00000416343 KHSRPQ92945 711 aaKnown RBP eCLIP6.95□□□□□ -1.3
LINC01349-201ENST00000416343 ZNF316A6NFI3 1004 aaPredicted RBP6.94□□□□□ -1.3
LINC01349-201ENST00000416343 PPP1R37O75864 691 aa6.92□□□□□ -1.3
LINC01349-201ENST00000416343 KDM4FA0A1W2PPD8 638 aa6.91□□□□□ -1.3
LINC01349-201ENST00000416343 PTGER2P43116 358 aa6.89□□□□□ -1.31
LINC01349-201ENST00000416343 POTEEQ6S8J3 1075 aa6.89□□□□□ -1.31
LINC01349-201ENST00000416343 PCDHGA4Q9Y5G9 962 aa6.89□□□□□ -1.31
LINC01349-201ENST00000416343 NUDT7P0C024 238 aa6.88□□□□□ -1.31
LINC01349-201ENST00000416343 LSM11P83369 360 aaKnown RBP eCLIP6.88□□□□□ -1.31
LINC01349-201ENST00000416343 HS6ST3Q8IZP7 471 aa6.87□□□□□ -1.31
LINC01349-201ENST00000416343 TMC2Q8TDI7 906 aa6.87□□□□□ -1.31
LINC01349-201ENST00000416343 PBX2P40425 430 aa6.86□□□□□ -1.31
LINC01349-201ENST00000416343 LHX6Q9UPM6 363 aa6.86□□□□□ -1.31
LINC01349-201ENST00000416343 PTCD2Q8WV60 388 aaKnown RBP6.85□□□□□ -1.31
LINC01349-201ENST00000416343 DNAJC5Q9H3Z4 198 aa6.85□□□□□ -1.31
LINC01349-201ENST00000416343 FOXK1P85037 733 aa6.84□□□□□ -1.31
LINC01349-201ENST00000416343 ANKRD13DQ6ZTN6 518 aa6.84□□□□□ -1.31
LINC01349-201ENST00000416343 GPHNQ9NQX3 736 aaPredicted RBP6.83□□□□□ -1.32
LINC01349-201ENST00000416343 RGS20O76081 388 aa6.81□□□□□ -1.32
LINC01349-201ENST00000416343 NKX1-1Q15270 411 aaPredicted RBP6.8□□□□□ -1.32
LINC01349-201ENST00000416343 Q6ZNB5 142 aa6.8□□□□□ -1.32
LINC01349-201ENST00000416343 AXIN2Q9Y2T1 843 aa6.8□□□□□ -1.32
LINC01349-201ENST00000416343 PSDA5PKW4 1024 aaPredicted RBP6.79□□□□□ -1.32
LINC01349-201ENST00000416343 DSG2Q14126 1118 aa6.79□□□□□ -1.32
LINC01349-201ENST00000416343 PLPP6Q8IY26 295 aa6.79□□□□□ -1.32
LINC01349-201ENST00000416343 ARHGAP33O14559 1287 aa6.78□□□□□ -1.32
LINC01349-201ENST00000416343 CHGAP10645 457 aaKnown RBP6.76□□□□□ -1.33
LINC01349-201ENST00000416343 ADGRD1Q6QNK2 874 aa6.76□□□□□ -1.33
LINC01349-201ENST00000416343 TK2O00142 265 aa6.75□□□□□ -1.33
LINC01349-201ENST00000416343 HRO43593 1189 aa6.75□□□□□ -1.33
LINC01349-201ENST00000416343 CRISPLD2Q9H0B8 497 aa6.75□□□□□ -1.33
LINC01349-201ENST00000416343 OXER1Q8TDS5 423 aa6.74□□□□□ -1.33
LINC01349-201ENST00000416343 DMRTA1Q5VZB9 504 aa6.73□□□□□ -1.33
LINC01349-201ENST00000416343 PSEN2P49810 448 aa6.72□□□□□ -1.33
LINC01349-201ENST00000416343 TBC1D12O60347 775 aa6.71□□□□□ -1.34
LINC01349-201ENST00000416343 PPP4R3BQ5MIZ7 849 aa6.71□□□□□ -1.34
LINC01349-201ENST00000416343 RYDENQ9NUL5 291 aaKnown RBP6.71□□□□□ -1.34
LINC01349-201ENST00000416343 HCSTQ9UBK5 93 aa6.7□□□□□ -1.34
LINC01349-201ENST00000416343 NCKAP5LQ9HCH0 1330 aa6.7□□□□□ -1.34
LINC01349-201ENST00000416343 ANO8Q9HCE9 1232 aaPredicted RBP6.69□□□□□ -1.34
LINC01349-201ENST00000416343 GTPBP6O43824 516 aaPredicted RBP6.68□□□□□ -1.34
LINC01349-201ENST00000416343 PPP1R15BQ5SWA1 713 aa6.67□□□□□ -1.34
LINC01349-201ENST00000416343 SLC4A5Q9BY07 1137 aa6.67□□□□□ -1.34
LINC01349-201ENST00000416343 FOSBP53539 338 aa6.66□□□□□ -1.34
LINC01349-201ENST00000416343 BCL2L12Q9HB09 334 aa6.66□□□□□ -1.34
LINC01349-201ENST00000416343 VPS9D1Q9Y2B5 631 aa6.66□□□□□ -1.34
LINC01349-201ENST00000416343 PDE4AP27815 886 aa6.65□□□□□ -1.34
LINC01349-201ENST00000416343 KCNK17Q96T54 332 aa6.65□□□□□ -1.34
LINC01349-201ENST00000416343 MFSD10Q14728 455 aa6.64□□□□□ -1.35
LINC01349-201ENST00000416343 UPF1Q92900 1129 aaKnown RBP eCLIP6.64□□□□□ -1.35
LINC01349-201ENST00000416343 BHMG1C9JSJ3 638 aaPredicted RBP6.63□□□□□ -1.35
LINC01349-201ENST00000416343 ZNF454Q8N9F8 522 aa6.63□□□□□ -1.35
LINC01349-201ENST00000416343 JPH4Q96JJ6 628 aa6.62□□□□□ -1.35
LINC01349-201ENST00000416343 EVI5O60447 810 aa6.6□□□□□ -1.35
LINC01349-201ENST00000416343 KCTD12Q96CX2 325 aaKnown RBP6.6□□□□□ -1.35
LINC01349-201ENST00000416343 KCNH8Q96L42 1107 aa6.6□□□□□ -1.35
LINC01349-201ENST00000416343 LARP6Q9BRS8 491 aaKnown RBP6.6□□□□□ -1.35
LINC01349-201ENST00000416343 ZBED2Q9BTP6 218 aa6.6□□□□□ -1.35
LINC01349-201ENST00000416343 DDX27Q96GQ7 796 aaKnown RBP6.59□□□□□ -1.35
LINC01349-201ENST00000416343 EMILIN3Q9NT22 766 aa6.59□□□□□ -1.35
LINC01349-201ENST00000416343 PTPREP23469 700 aa6.58□□□□□ -1.36
LINC01349-201ENST00000416343 ZDHHC16Q969W1 377 aa6.58□□□□□ -1.36
LINC01349-201ENST00000416343 ADAM33Q9BZ11 813 aa6.58□□□□□ -1.36
LINC01349-201ENST00000416343 IFFO2Q5TF58 517 aa6.57□□□□□ -1.36
LINC01349-201ENST00000416343 CADPS2Q86UW7 1296 aa6.56□□□□□ -1.36
LINC01349-201ENST00000416343 THSD4Q6ZMP0 1018 aa6.55□□□□□ -1.36
LINC01349-201ENST00000416343 STAC3Q96MF2 364 aa6.55□□□□□ -1.36
LINC01349-201ENST00000416343 PCDHGA10Q9Y5H3 936 aa6.55□□□□□ -1.36
LINC01349-201ENST00000416343 CAMK2BQ13554 666 aa6.54□□□□□ -1.36
LINC01349-201ENST00000416343 MAP3K9P80192 1104 aa6.53□□□□□ -1.36
LINC01349-201ENST00000416343 SUZ12Q15022 739 aaKnown RBP6.53□□□□□ -1.36
LINC01349-201ENST00000416343 PPP1R3GB7ZBB8 358 aa6.52□□□□□ -1.37
LINC01349-201ENST00000416343 ZNF775Q96BV0 537 aaPredicted RBP6.52□□□□□ -1.37
LINC01349-201ENST00000416343 COL9A1P20849 921 aa6.51□□□□□ -1.37
LINC01349-201ENST00000416343 PTPN5P54829 565 aa6.51□□□□□ -1.37
LINC01349-201ENST00000416343 MRPL50Q8N5N7 158 aaKnown RBP6.51□□□□□ -1.37
LINC01349-201ENST00000416343 PHF14O94880 888 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms