RNA–Protein interactions for RNA: ENST00000416330.1

XIST-201, X inactive specific transcript, humanhuman

TSL 2 BASIC

Gene XIST, Length 750 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-201ENST00000416330 RNF25Q96BH1 459 aaPredicted RBP11.61□□□□□ -0.55
XIST-201ENST00000416330 TAOK2Q9UL54 1235 aa11.6□□□□□ -0.55
XIST-201ENST00000416330 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.57□□□□□ -0.56
XIST-201ENST00000416330 RNF166Q96A37 237 aaPredicted RBP11.57□□□□□ -0.56
XIST-201ENST00000416330 ZFP91Q96JP5 570 aaPredicted RBP11.57□□□□□ -0.56
XIST-201ENST00000416330 PHF8Q9UPP1 1060 aa11.55□□□□□ -0.56
XIST-201ENST00000416330 MYT1LQ9UL68 1186 aa11.54□□□□□ -0.56
XIST-201ENST00000416330 ZNF687Q8N1G0 1237 aa11.53□□□□□ -0.56
XIST-201ENST00000416330 NLRP6P59044 892 aa11.52□□□□□ -0.57
XIST-201ENST00000416330 TMEM92Q6UXU6 159 aa11.52□□□□□ -0.57
XIST-201ENST00000416330 GPR153Q6NV75 609 aa11.5□□□□□ -0.57
XIST-201ENST00000416330 PTGER2P43116 358 aa11.49□□□□□ -0.57
XIST-201ENST00000416330 MS4A4AQ96JQ5 239 aa11.49□□□□□ -0.57
XIST-201ENST00000416330 ARSIQ5FYB1 569 aa11.48□□□□□ -0.57
XIST-201ENST00000416330 ANKRD13DQ6ZTN6 518 aa11.45□□□□□ -0.58
XIST-201ENST00000416330 BCL11BQ9C0K0 894 aaPredicted RBP11.44□□□□□ -0.58
XIST-201ENST00000416330 STK24Q9Y6E0 443 aa11.44□□□□□ -0.58
XIST-201ENST00000416330 ZNF316A6NFI3 1004 aaPredicted RBP11.41□□□□□ -0.58
XIST-201ENST00000416330 ECM2O94769 699 aaPredicted RBP11.38□□□□□ -0.59
XIST-201ENST00000416330 STK25O00506 426 aa11.37□□□□□ -0.59
XIST-201ENST00000416330 ARXQ96QS3 562 aa11.37□□□□□ -0.59
XIST-201ENST00000416330 FBXO22Q8NEZ5 403 aa11.35□□□□□ -0.59
XIST-201ENST00000416330 KHSRPQ92945 711 aaKnown RBP eCLIP11.35□□□□□ -0.59
XIST-201ENST00000416330 LSM11P83369 360 aaKnown RBP eCLIP11.34□□□□□ -0.59
XIST-201ENST00000416330 PKD2Q13563 968 aa11.34□□□□□ -0.59
XIST-201ENST00000416330 PBX2P40425 430 aa11.33□□□□□ -0.6
XIST-201ENST00000416330 TMC2Q8TDI7 906 aa11.33□□□□□ -0.6
XIST-201ENST00000416330 BCANQ96GW7 911 aa11.33□□□□□ -0.6
XIST-201ENST00000416330 C2orf72A6NCS6 295 aa11.32□□□□□ -0.6
XIST-201ENST00000416330 RGL2O15211 777 aa11.32□□□□□ -0.6
XIST-201ENST00000416330 MFRPQ9BY79 579 aa11.31□□□□□ -0.6
XIST-201ENST00000416330 NUDT7P0C024 238 aa11.3□□□□□ -0.6
XIST-201ENST00000416330 TIMELESSQ9UNS1 1208 aa11.3□□□□□ -0.6
XIST-201ENST00000416330 KIF3CO14782 793 aa11.26□□□□□ -0.61
XIST-201ENST00000416330 PCDHGA4Q9Y5G9 962 aa11.26□□□□□ -0.61
XIST-201ENST00000416330 LHX6Q9UPM6 363 aa11.25□□□□□ -0.61
XIST-201ENST00000416330 SLC34A2O95436 690 aa11.24□□□□□ -0.61
XIST-201ENST00000416330 PSDA5PKW4 1024 aaPredicted RBP11.23□□□□□ -0.61
XIST-201ENST00000416330 PLCB2Q00722 1185 aa11.22□□□□□ -0.61
XIST-201ENST00000416330 AXIN2Q9Y2T1 843 aa11.21□□□□□ -0.61
XIST-201ENST00000416330 HCSTQ9UBK5 93 aa11.2□□□□□ -0.62
XIST-201ENST00000416330 TPRNQ4KMQ1 711 aa11.19□□□□□ -0.62
XIST-201ENST00000416330 ARHGAP33O14559 1287 aa11.17□□□□□ -0.62
XIST-201ENST00000416330 STAC3Q96MF2 364 aa11.17□□□□□ -0.62
XIST-201ENST00000416330 TULP1O00294 542 aaPredicted RBP11.16□□□□□ -0.62
XIST-201ENST00000416330 PLA2G2EQ9NZK7 142 aa11.16□□□□□ -0.62
XIST-201ENST00000416330 ADGRD1Q6QNK2 874 aa11.14□□□□□ -0.63
XIST-201ENST00000416330 TBC1D12O60347 775 aa11.13□□□□□ -0.63
XIST-201ENST00000416330 KCNH8Q96L42 1107 aa11.13□□□□□ -0.63
XIST-201ENST00000416330 PPP1R37O75864 691 aa11.12□□□□□ -0.63
XIST-201ENST00000416330 HAP1P54257 671 aaPredicted RBP11.11□□□□□ -0.63
XIST-201ENST00000416330 POTEEQ6S8J3 1075 aa11.1□□□□□ -0.63
XIST-201ENST00000416330 PPP4R3BQ5MIZ7 849 aa11.09□□□□□ -0.63
XIST-201ENST00000416330 TK2O00142 265 aa11.08□□□□□ -0.64
XIST-201ENST00000416330 PTCD2Q8WV60 388 aaKnown RBP11.08□□□□□ -0.64
XIST-201ENST00000416330 HS6ST3Q8IZP7 471 aa11.07□□□□□ -0.64
XIST-201ENST00000416330 PLPP6Q8IY26 295 aa11.06□□□□□ -0.64
XIST-201ENST00000416330 FOXK1P85037 733 aa11.05□□□□□ -0.64
XIST-201ENST00000416330 HOMEZQ8IX15 550 aa11.04□□□□□ -0.64
XIST-201ENST00000416330 GPHNQ9NQX3 736 aaPredicted RBP11.03□□□□□ -0.64
XIST-201ENST00000416330 PSEN2P49810 448 aa11.02□□□□□ -0.65
XIST-201ENST00000416330 KCTD12Q96CX2 325 aaKnown RBP11.01□□□□□ -0.65
XIST-201ENST00000416330 CHGAP10645 457 aaKnown RBP11□□□□□ -0.65
XIST-201ENST00000416330 DMRTA1Q5VZB9 504 aa11□□□□□ -0.65
XIST-201ENST00000416330 KDM4FA0A1W2PPD8 638 aa10.98□□□□□ -0.65
XIST-201ENST00000416330 KCNK17Q96T54 332 aa10.98□□□□□ -0.65
XIST-201ENST00000416330 HRO43593 1189 aa10.97□□□□□ -0.65
XIST-201ENST00000416330 DSG2Q14126 1118 aa10.96□□□□□ -0.65
XIST-201ENST00000416330 RYDENQ9NUL5 291 aaKnown RBP10.94□□□□□ -0.66
XIST-201ENST00000416330 NKX1-1Q15270 411 aaPredicted RBP10.93□□□□□ -0.66
XIST-201ENST00000416330 GOLGA8CPA6NN73 597 aa10.91□□□□□ -0.66
XIST-201ENST00000416330 RANGAP1P46060 587 aaPredicted RBP10.91□□□□□ -0.66
XIST-201ENST00000416330 PTPN5P54829 565 aa10.91□□□□□ -0.66
XIST-201ENST00000416330 ZNF454Q8N9F8 522 aa10.91□□□□□ -0.66
XIST-201ENST00000416330 GTF3C3Q9Y5Q9 886 aa10.91□□□□□ -0.66
XIST-201ENST00000416330 UPF1Q92900 1129 aaKnown RBP eCLIP10.9□□□□□ -0.66
XIST-201ENST00000416330 VSIG10Q8N0Z9 540 aa10.89□□□□□ -0.67
XIST-201ENST00000416330 DNAJC5Q9H3Z4 198 aa10.89□□□□□ -0.67
XIST-201ENST00000416330 VPS9D1Q9Y2B5 631 aa10.88□□□□□ -0.67
XIST-201ENST00000416330 PTPREP23469 700 aa10.86□□□□□ -0.67
XIST-201ENST00000416330 OXER1Q8TDS5 423 aa10.86□□□□□ -0.67
XIST-201ENST00000416330 BCL2L12Q9HB09 334 aa10.84□□□□□ -0.67
XIST-201ENST00000416330 PPP1R15BQ5SWA1 713 aa10.83□□□□□ -0.68
XIST-201ENST00000416330 MRPL50Q8N5N7 158 aaKnown RBP10.83□□□□□ -0.68
XIST-201ENST00000416330 SLC4A5Q9BY07 1137 aa10.83□□□□□ -0.68
XIST-201ENST00000416330 PDE4AP27815 886 aa10.82□□□□□ -0.68
XIST-201ENST00000416330 ERICH6Q7L0X2 663 aa10.82□□□□□ -0.68
XIST-201ENST00000416330 RGS20O76081 388 aa10.81□□□□□ -0.68
XIST-201ENST00000416330 WNT2BQ93097 391 aa10.8□□□□□ -0.68
XIST-201ENST00000416330 NBPF3Q9H094 633 aa10.79□□□□□ -0.68
XIST-201ENST00000416330 FOSBP53539 338 aa10.78□□□□□ -0.68
XIST-201ENST00000416330 THSD4Q6ZMP0 1018 aa10.78□□□□□ -0.68
XIST-201ENST00000416330 CRISPLD2Q9H0B8 497 aa10.78□□□□□ -0.68
XIST-201ENST00000416330 IFFO2Q5TF58 517 aa10.76□□□□□ -0.69
XIST-201ENST00000416330 ZDHHC16Q969W1 377 aa10.76□□□□□ -0.69
XIST-201ENST00000416330 EVI5O60447 810 aa10.75□□□□□ -0.69
XIST-201ENST00000416330 JPH4Q96JJ6 628 aa10.75□□□□□ -0.69
XIST-201ENST00000416330 BHMG1C9JSJ3 638 aaPredicted RBP10.74□□□□□ -0.69
XIST-201ENST00000416330 GTPBP6O43824 516 aaPredicted RBP10.74□□□□□ -0.69
XIST-201ENST00000416330 DCAF8L2P0C7V8 631 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms