RNA–Protein interactions for RNA: ENST00000416118.1

CHEK2P3-201, Transcript of checkpoint kinase 2 pseudogene 3, humanhuman

BASIC

Gene CHEK2P3, Length 248 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2P3-201ENST00000416118 MAMSTRQ6ZN01 415 aa9.19□□□□□ -0.94
CHEK2P3-201ENST00000416118 CEP164Q9UPV0 1460 aa9.19□□□□□ -0.94
CHEK2P3-201ENST00000416118 KIF21AQ7Z4S6 1674 aa9.19□□□□□ -0.94
CHEK2P3-201ENST00000416118 EFCAB3Q8N7B9 438 aa9.18□□□□□ -0.94
CHEK2P3-201ENST00000416118 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.18□□□□□ -0.94
CHEK2P3-201ENST00000416118 CCDC88BA6NC98 1476 aa9.17□□□□□ -0.94
CHEK2P3-201ENST00000416118 BCL11BQ9C0K0 894 aaPredicted RBP9.16□□□□□ -0.94
CHEK2P3-201ENST00000416118 WDR62O43379 1518 aa9.15□□□□□ -0.94
CHEK2P3-201ENST00000416118 SOX12O15370 315 aa9.15□□□□□ -0.94
CHEK2P3-201ENST00000416118 SCUBE2Q9NQ36 999 aa9.14□□□□□ -0.95
CHEK2P3-201ENST00000416118 STK25O00506 426 aa9.13□□□□□ -0.95
CHEK2P3-201ENST00000416118 STK24Q9Y6E0 443 aa9.13□□□□□ -0.95
CHEK2P3-201ENST00000416118 L3MBTL3Q96JM7 780 aaPredicted RBP9.11□□□□□ -0.95
CHEK2P3-201ENST00000416118 URB2Q14146 1524 aaKnown RBP9.1□□□□□ -0.95
CHEK2P3-201ENST00000416118 DPY19L2Q6NUT2 758 aa9.09□□□□□ -0.95
CHEK2P3-201ENST00000416118 HS6ST3Q8IZP7 471 aa9.08□□□□□ -0.96
CHEK2P3-201ENST00000416118 PHF8Q9UPP1 1060 aa9.08□□□□□ -0.96
CHEK2P3-201ENST00000416118 FBXO22Q8NEZ5 403 aa9.07□□□□□ -0.96
CHEK2P3-201ENST00000416118 MS4A4AQ96JQ5 239 aa9.07□□□□□ -0.96
CHEK2P3-201ENST00000416118 AMER1Q5JTC6 1135 aaPredicted RBP9.06□□□□□ -0.96
CHEK2P3-201ENST00000416118 MFRPQ9BY79 579 aa9.06□□□□□ -0.96
CHEK2P3-201ENST00000416118 SUPT5HO00267 1087 aaKnown RBP9.05□□□□□ -0.96
CHEK2P3-201ENST00000416118 NLRP6P59044 892 aa9.05□□□□□ -0.96
CHEK2P3-201ENST00000416118 TMEM121BQ9BXQ6 578 aaPredicted RBP9.05□□□□□ -0.96
CHEK2P3-201ENST00000416118 BOLA1Q9Y3E2 137 aa9.04□□□□□ -0.96
CHEK2P3-201ENST00000416118 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.03□□□□□ -0.96
CHEK2P3-201ENST00000416118 TOPBP1Q92547 1522 aa9.02□□□□□ -0.97
CHEK2P3-201ENST00000416118 CHGAP10645 457 aaKnown RBP9.01□□□□□ -0.97
CHEK2P3-201ENST00000416118 SLAIN1Q8ND83 568 aa9.01□□□□□ -0.97
CHEK2P3-201ENST00000416118 IFT140Q96RY7 1462 aa9.01□□□□□ -0.97
CHEK2P3-201ENST00000416118 C3orf67Q6ZVT6 689 aa9□□□□□ -0.97
CHEK2P3-201ENST00000416118 ZNF608Q9ULD9 1512 aaPredicted RBP9□□□□□ -0.97
CHEK2P3-201ENST00000416118 ABCC8Q09428 1581 aa8.99□□□□□ -0.97
CHEK2P3-201ENST00000416118 G3V3G9 751 aa8.99□□□□□ -0.97
CHEK2P3-201ENST00000416118 RTN4Q9NQC3 1192 aaKnown RBP8.99□□□□□ -0.97
CHEK2P3-201ENST00000416118 MICALL2Q8IY33 904 aa8.98□□□□□ -0.97
CHEK2P3-201ENST00000416118 DNMBPQ6XZF7 1577 aa8.97□□□□□ -0.97
CHEK2P3-201ENST00000416118 PRDM2Q13029 1718 aa8.96□□□□□ -0.98
CHEK2P3-201ENST00000416118 NKX1-1Q15270 411 aaPredicted RBP8.95□□□□□ -0.98
CHEK2P3-201ENST00000416118 AQRO60306 1485 aaKnown RBP eCLIP8.94□□□□□ -0.98
CHEK2P3-201ENST00000416118 POLA1P09884 1462 aaPredicted RBP8.94□□□□□ -0.98
CHEK2P3-201ENST00000416118 LCE2DQ5TA82 110 aaPredicted RBP8.93□□□□□ -0.98
CHEK2P3-201ENST00000416118 SOGA1O94964 1423 aa8.93□□□□□ -0.98
CHEK2P3-201ENST00000416118 RAD54L2Q9Y4B4 1467 aa8.93□□□□□ -0.98
CHEK2P3-201ENST00000416118 TDRD9Q8NDG6 1382 aaKnown RBP8.91□□□□□ -0.98
CHEK2P3-201ENST00000416118 PPP1R37O75864 691 aa8.91□□□□□ -0.98
CHEK2P3-201ENST00000416118 TMEM92Q6UXU6 159 aa8.91□□□□□ -0.98
CHEK2P3-201ENST00000416118 FGD5Q6ZNL6 1462 aa8.9□□□□□ -0.98
CHEK2P3-201ENST00000416118 SNPHO15079 494 aa8.9□□□□□ -0.98
CHEK2P3-201ENST00000416118 CUX1P39880 1505 aa8.9□□□□□ -0.99
CHEK2P3-201ENST00000416118 TARBP1Q13395 1621 aaKnown RBP8.89□□□□□ -0.99
CHEK2P3-201ENST00000416118 EIF4G3O43432 1585 aaKnown RBP8.89□□□□□ -0.99
CHEK2P3-201ENST00000416118 FAM163AQ96GL9 167 aaPredicted RBP8.88□□□□□ -0.99
CHEK2P3-201ENST00000416118 RYDENQ9NUL5 291 aaKnown RBP8.88□□□□□ -0.99
CHEK2P3-201ENST00000416118 GTPBP6O43824 516 aaPredicted RBP8.85□□□□□ -0.99
CHEK2P3-201ENST00000416118 ST18O60284 1047 aa8.85□□□□□ -0.99
CHEK2P3-201ENST00000416118 KIF3CO14782 793 aa8.84□□□□□ -0.99
CHEK2P3-201ENST00000416118 SNAPC4Q5SXM2 1469 aa8.83□□□□□ -1
CHEK2P3-201ENST00000416118 HOXB3P14651 431 aaPredicted RBP8.83□□□□□ -1
CHEK2P3-201ENST00000416118 CHMP7Q8WUX9 453 aaPredicted RBP8.83□□□□□ -1
CHEK2P3-201ENST00000416118 POTEMA6NI47 508 aa8.82□□□□□ -1
CHEK2P3-201ENST00000416118 GRIN2BQ13224 1484 aa8.82□□□□□ -1
CHEK2P3-201ENST00000416118 BBXQ8WY36 941 aaPredicted RBP8.81□□□□□ -1
CHEK2P3-201ENST00000416118 WRNQ14191 1432 aaPredicted RBP eCLIP8.8□□□□□ -1
CHEK2P3-201ENST00000416118 ARHGEF11O15085 1522 aa8.8□□□□□ -1
CHEK2P3-201ENST00000416118 POTEGQ6S5H5 508 aa8.8□□□□□ -1
CHEK2P3-201ENST00000416118 GAPVD1Q14C86 1478 aa8.8□□□□□ -1
CHEK2P3-201ENST00000416118 ABCA10Q8WWZ4 1543 aa8.8□□□□□ -1
CHEK2P3-201ENST00000416118 MAGI1Q96QZ7 1491 aaPredicted RBP8.79□□□□□ -1
CHEK2P3-201ENST00000416118 C2orf72A6NCS6 295 aa8.79□□□□□ -1
CHEK2P3-201ENST00000416118 CYB5RLQ6IPT4 315 aa8.79□□□□□ -1
CHEK2P3-201ENST00000416118 WDR97A6NE52 1622 aa8.79□□□□□ -1
CHEK2P3-201ENST00000416118 RIMBP3CA6NJZ7 1639 aa8.79□□□□□ -1
CHEK2P3-201ENST00000416118 RIMBP3BA6NNM3 1639 aa8.79□□□□□ -1
CHEK2P3-201ENST00000416118 RIMBP3Q9UFD9 1639 aa8.79□□□□□ -1
CHEK2P3-201ENST00000416118 DOK7Q18PE1 504 aa8.78□□□□□ -1
CHEK2P3-201ENST00000416118 SYNJ2O15056 1496 aa8.77□□□□□ -1.01
CHEK2P3-201ENST00000416118 CHD1O14646 1710 aa8.76□□□□□ -1.01
CHEK2P3-201ENST00000416118 SYNJ1O43426 1573 aa8.75□□□□□ -1.01
CHEK2P3-201ENST00000416118 TMC2Q8TDI7 906 aa8.75□□□□□ -1.01
CHEK2P3-201ENST00000416118 ZSWIM6Q9HCJ5 1215 aa8.75□□□□□ -1.01
CHEK2P3-201ENST00000416118 TOP2BQ02880 1626 aa8.74□□□□□ -1.01
CHEK2P3-201ENST00000416118 GPHNQ9NQX3 736 aaPredicted RBP8.74□□□□□ -1.01
CHEK2P3-201ENST00000416118 ARAP1Q96P48 1450 aa8.74□□□□□ -1.01
CHEK2P3-201ENST00000416118 ABCA5Q8WWZ7 1642 aa8.73□□□□□ -1.01
CHEK2P3-201ENST00000416118 HOXB1P14653 301 aaPredicted RBP8.73□□□□□ -1.01
CHEK2P3-201ENST00000416118 CLASP1Q7Z460 1538 aa8.73□□□□□ -1.01
CHEK2P3-201ENST00000416118 RIMBP2O15034 1052 aa8.72□□□□□ -1.01
CHEK2P3-201ENST00000416118 FOXK1P85037 733 aa8.72□□□□□ -1.01
CHEK2P3-201ENST00000416118 ZNF710Q8N1W2 664 aa8.72□□□□□ -1.01
CHEK2P3-201ENST00000416118 CRISPLD2Q9H0B8 497 aa8.72□□□□□ -1.01
CHEK2P3-201ENST00000416118 BIVM-ERCC5R4GMW8 1640 aa8.72□□□□□ -1.01
CHEK2P3-201ENST00000416118 SLC34A2O95436 690 aa8.71□□□□□ -1.02
CHEK2P3-201ENST00000416118 GPR153Q6NV75 609 aa8.71□□□□□ -1.02
CHEK2P3-201ENST00000416118 PCDH10Q9P2E7 1040 aa8.71□□□□□ -1.02
CHEK2P3-201ENST00000416118 FHAD1B1AJZ9 1412 aa8.71□□□□□ -1.02
CHEK2P3-201ENST00000416118 GRIN2AQ12879 1464 aa8.7□□□□□ -1.02
CHEK2P3-201ENST00000416118 PBRM1Q86U86 1689 aa8.69□□□□□ -1.02
CHEK2P3-201ENST00000416118 MARVELD3Q96A59 401 aa8.69□□□□□ -1.02
CHEK2P3-201ENST00000416118 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms