RNA–Protein interactions for RNA: ENST00000416078.1

NCLP2-201, Transcript of nucleolin pseudogene 2, humanhuman

BASIC

Gene NCLP2, Length 1,462 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP2-201ENST00000416078 CHGAP10645 457 aaKnown RBP11.56□□□□□ -0.56
NCLP2-201ENST00000416078 L3MBTL3Q96JM7 780 aaPredicted RBP11.56□□□□□ -0.56
NCLP2-201ENST00000416078 FBXO22Q8NEZ5 403 aa11.54□□□□□ -0.56
NCLP2-201ENST00000416078 MFRPQ9BY79 579 aa11.54□□□□□ -0.56
NCLP2-201ENST00000416078 PHF8Q9UPP1 1060 aa11.54□□□□□ -0.56
NCLP2-201ENST00000416078 MS4A4AQ96JQ5 239 aa11.53□□□□□ -0.56
NCLP2-201ENST00000416078 NLRP6P59044 892 aa11.52□□□□□ -0.56
NCLP2-201ENST00000416078 ERBB3P21860 1342 aa11.5□□□□□ -0.57
NCLP2-201ENST00000416078 HOXB1P14653 301 aaPredicted RBP11.49□□□□□ -0.57
NCLP2-201ENST00000416078 DPY19L2Q6NUT2 758 aa11.49□□□□□ -0.57
NCLP2-201ENST00000416078 DCAF8L2P0C7V8 631 aa11.47□□□□□ -0.57
NCLP2-201ENST00000416078 NKX1-1Q15270 411 aaPredicted RBP11.46□□□□□ -0.57
NCLP2-201ENST00000416078 BOLA1Q9Y3E2 137 aa11.44□□□□□ -0.58
NCLP2-201ENST00000416078 PLA2G2EQ9NZK7 142 aa11.44□□□□□ -0.58
NCLP2-201ENST00000416078 ZNF710Q8N1W2 664 aa11.41□□□□□ -0.58
NCLP2-201ENST00000416078 MICALL2Q8IY33 904 aa11.39□□□□□ -0.59
NCLP2-201ENST00000416078 RYDENQ9NUL5 291 aaKnown RBP11.39□□□□□ -0.59
NCLP2-201ENST00000416078 G3V3G9 751 aa11.37□□□□□ -0.59
NCLP2-201ENST00000416078 ZNF687Q8N1G0 1237 aa11.37□□□□□ -0.59
NCLP2-201ENST00000416078 HOXB3P14651 431 aaPredicted RBP11.36□□□□□ -0.59
NCLP2-201ENST00000416078 BBXQ8WY36 941 aaPredicted RBP11.36□□□□□ -0.59
NCLP2-201ENST00000416078 DOK7Q18PE1 504 aa11.35□□□□□ -0.59
NCLP2-201ENST00000416078 GTPBP6O43824 516 aaPredicted RBP11.33□□□□□ -0.6
NCLP2-201ENST00000416078 PPP1R37O75864 691 aa11.33□□□□□ -0.6
NCLP2-201ENST00000416078 VARS2Q5ST30 1063 aaKnown RBP11.32□□□□□ -0.6
NCLP2-201ENST00000416078 RIMBP2O15034 1052 aa11.29□□□□□ -0.6
NCLP2-201ENST00000416078 TMEM92Q6UXU6 159 aa11.27□□□□□ -0.6
NCLP2-201ENST00000416078 HCSTQ9UBK5 93 aa11.25□□□□□ -0.61
NCLP2-201ENST00000416078 RGS20O76081 388 aa11.24□□□□□ -0.61
NCLP2-201ENST00000416078 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.23□□□□□ -0.61
NCLP2-201ENST00000416078 KIF3CO14782 793 aa11.22□□□□□ -0.61
NCLP2-201ENST00000416078 ANKRD13DQ6ZTN6 518 aa11.2□□□□□ -0.62
NCLP2-201ENST00000416078 ZSWIM6Q9HCJ5 1215 aa11.2□□□□□ -0.62
NCLP2-201ENST00000416078 IRX2Q9BZI1 471 aaPredicted RBP11.18□□□□□ -0.62
NCLP2-201ENST00000416078 SPRYD3Q8NCJ5 442 aa11.17□□□□□ -0.62
NCLP2-201ENST00000416078 C2orf72A6NCS6 295 aa11.15□□□□□ -0.62
NCLP2-201ENST00000416078 TMC2Q8TDI7 906 aa11.12□□□□□ -0.63
NCLP2-201ENST00000416078 CRISPLD2Q9H0B8 497 aa11.12□□□□□ -0.63
NCLP2-201ENST00000416078 GPHNQ9NQX3 736 aaPredicted RBP11.12□□□□□ -0.63
NCLP2-201ENST00000416078 PAXIP1Q6ZW49 1069 aaPredicted RBP11.11□□□□□ -0.63
NCLP2-201ENST00000416078 LSM11P83369 360 aaKnown RBP eCLIP11.09□□□□□ -0.63
NCLP2-201ENST00000416078 NCKAP5LQ9HCH0 1330 aa11.09□□□□□ -0.63
NCLP2-201ENST00000416078 FOXK1P85037 733 aa11.08□□□□□ -0.64
NCLP2-201ENST00000416078 CFAP44Q96MT7 982 aa11.07□□□□□ -0.64
NCLP2-201ENST00000416078 CADPS2Q86UW7 1296 aa11.06□□□□□ -0.64
NCLP2-201ENST00000416078 MFSD10Q14728 455 aa11.05□□□□□ -0.64
NCLP2-201ENST00000416078 SLC34A2O95436 690 aa11.04□□□□□ -0.64
NCLP2-201ENST00000416078 PDE4AP27815 886 aa11.04□□□□□ -0.64
NCLP2-201ENST00000416078 DSG2Q14126 1118 aa11.03□□□□□ -0.64
NCLP2-201ENST00000416078 PLPP6Q8IY26 295 aa11□□□□□ -0.65
NCLP2-201ENST00000416078 PPP1R15BQ5SWA1 713 aa11□□□□□ -0.65
NCLP2-201ENST00000416078 GPR153Q6NV75 609 aa11□□□□□ -0.65
NCLP2-201ENST00000416078 PBX2P40425 430 aa10.98□□□□□ -0.65
NCLP2-201ENST00000416078 PLCB2Q00722 1185 aa10.98□□□□□ -0.65
NCLP2-201ENST00000416078 DDX27Q96GQ7 796 aaKnown RBP10.97□□□□□ -0.65
NCLP2-201ENST00000416078 PTCD2Q8WV60 388 aaKnown RBP10.96□□□□□ -0.65
NCLP2-201ENST00000416078 LARP6Q9BRS8 491 aaKnown RBP10.96□□□□□ -0.65
NCLP2-201ENST00000416078 IFFO2Q5TF58 517 aa10.92□□□□□ -0.66
NCLP2-201ENST00000416078 PCDHGA4Q9Y5G9 962 aa10.92□□□□□ -0.66
NCLP2-201ENST00000416078 OXER1Q8TDS5 423 aa10.91□□□□□ -0.66
NCLP2-201ENST00000416078 ZNF316A6NFI3 1004 aaPredicted RBP10.9□□□□□ -0.66
NCLP2-201ENST00000416078 CAMK2BQ13554 666 aa10.9□□□□□ -0.66
NCLP2-201ENST00000416078 ARSIQ5FYB1 569 aa10.89□□□□□ -0.67
NCLP2-201ENST00000416078 TSHZ2Q9NRE2 1034 aa10.89□□□□□ -0.67
NCLP2-201ENST00000416078 KDM4FA0A1W2PPD8 638 aa10.88□□□□□ -0.67
NCLP2-201ENST00000416078 KHSRPQ92945 711 aaKnown RBP eCLIP10.86□□□□□ -0.67
NCLP2-201ENST00000416078 TBC1D12O60347 775 aa10.84□□□□□ -0.67
NCLP2-201ENST00000416078 EMILIN3Q9NT22 766 aa10.84□□□□□ -0.67
NCLP2-201ENST00000416078 NUDT7P0C024 238 aa10.82□□□□□ -0.68
NCLP2-201ENST00000416078 Q6ZNB5 142 aa10.81□□□□□ -0.68
NCLP2-201ENST00000416078 UPF1Q92900 1129 aaKnown RBP eCLIP10.81□□□□□ -0.68
NCLP2-201ENST00000416078 ARIH1Q9Y4X5 557 aaPredicted RBP10.78□□□□□ -0.68
NCLP2-201ENST00000416078 E2F4Q16254 413 aa10.77□□□□□ -0.69
NCLP2-201ENST00000416078 WDR70Q9NW82 654 aa10.77□□□□□ -0.69
NCLP2-201ENST00000416078 ANO8Q9HCE9 1232 aaPredicted RBP10.76□□□□□ -0.69
NCLP2-201ENST00000416078 LHX6Q9UPM6 363 aa10.76□□□□□ -0.69
NCLP2-201ENST00000416078 A0A0G2JS52 829 aa10.75□□□□□ -0.69
NCLP2-201ENST00000416078 PSDA5PKW4 1024 aaPredicted RBP10.74□□□□□ -0.69
NCLP2-201ENST00000416078 ADGRD1Q6QNK2 874 aa10.74□□□□□ -0.69
NCLP2-201ENST00000416078 MAP3K9P80192 1104 aa10.74□□□□□ -0.69
NCLP2-201ENST00000416078 EVI5O60447 810 aa10.73□□□□□ -0.69
NCLP2-201ENST00000416078 HAP1P54257 671 aaPredicted RBP10.73□□□□□ -0.69
NCLP2-201ENST00000416078 DPYSL4O14531 572 aa10.71□□□□□ -0.69
NCLP2-201ENST00000416078 TK2O00142 265 aa10.7□□□□□ -0.7
NCLP2-201ENST00000416078 PDIA6Q15084 440 aa10.7□□□□□ -0.7
NCLP2-201ENST00000416078 JPH4Q96JJ6 628 aa10.68□□□□□ -0.7
NCLP2-201ENST00000416078 SPDYE16A6NNV3 312 aaPredicted RBP10.67□□□□□ -0.7
NCLP2-201ENST00000416078 FOSBP53539 338 aa10.67□□□□□ -0.7
NCLP2-201ENST00000416078 LAPTM4AQ15012 233 aa10.66□□□□□ -0.7
NCLP2-201ENST00000416078 POTEEQ6S8J3 1075 aa10.66□□□□□ -0.7
NCLP2-201ENST00000416078 KCNV2Q8TDN2 545 aa10.66□□□□□ -0.7
NCLP2-201ENST00000416078 PPP4R3BQ5MIZ7 849 aa10.65□□□□□ -0.7
NCLP2-201ENST00000416078 AXIN2Q9Y2T1 843 aa10.65□□□□□ -0.7
NCLP2-201ENST00000416078 P3H3Q8IVL6 736 aa10.64□□□□□ -0.71
NCLP2-201ENST00000416078 VSIG10Q8N0Z9 540 aa10.64□□□□□ -0.71
NCLP2-201ENST00000416078 ARHGEF1Q92888 912 aaKnown RBP10.64□□□□□ -0.71
NCLP2-201ENST00000416078 KCTD12Q96CX2 325 aaKnown RBP10.64□□□□□ -0.71
NCLP2-201ENST00000416078 ARHGAP33O14559 1287 aa10.63□□□□□ -0.71
NCLP2-201ENST00000416078 KDM2AQ9Y2K7 1162 aa10.63□□□□□ -0.71
NCLP2-201ENST00000416078 HRO43593 1189 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms