RNA–Protein interactions for RNA: ENST00000412922.6

COPS7B-209, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 5

Gene COPS7B, Length 1,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-209ENST00000412922 CLIP1P30622 1438 aa20.07■□□□□ 0.8
COPS7B-209ENST00000412922 SCAPERQ9BY12 1400 aa20.07■□□□□ 0.8
COPS7B-209ENST00000412922 FER1L4A9Z1Z3 1794 aa20.06■□□□□ 0.8
COPS7B-209ENST00000412922 YEATS2Q9ULM3 1422 aa20.06■□□□□ 0.8
COPS7B-209ENST00000412922 TROQ12816 1431 aaPredicted RBP20.05■□□□□ 0.8
COPS7B-209ENST00000412922 SIGLEC1Q9BZZ2 1709 aa20.04■□□□□ 0.8
COPS7B-209ENST00000412922 ZNF518AQ6AHZ1 1483 aa20.03■□□□□ 0.8
COPS7B-209ENST00000412922 ATP1B4Q9UN42 357 aaPredicted RBP20.02■□□□□ 0.8
COPS7B-209ENST00000412922 C9orf84Q5VXU9 1444 aa20.02■□□□□ 0.8
COPS7B-209ENST00000412922 EFCAB2Q5VUJ9 269 aa20.02■□□□□ 0.79
COPS7B-209ENST00000412922 LRRIQ1Q96JM4 1722 aa20.01■□□□□ 0.79
COPS7B-209ENST00000412922 ARHGAP5Q13017 1502 aa20.01■□□□□ 0.79
COPS7B-209ENST00000412922 CHIC1Q5VXU3 224 aa20.01■□□□□ 0.79
COPS7B-209ENST00000412922 CCDC18Q5T9S5 1454 aa20■□□□□ 0.79
COPS7B-209ENST00000412922 KDM5CP41229 1560 aa20■□□□□ 0.79
COPS7B-209ENST00000412922 ATP10AO60312 1499 aa20■□□□□ 0.79
COPS7B-209ENST00000412922 ARHGEF12Q9NZN5 1544 aa19.98■□□□□ 0.79
COPS7B-209ENST00000412922 EHMT2Q96KQ7 1210 aa19.98■□□□□ 0.79
COPS7B-209ENST00000412922 PREX2Q70Z35 1606 aa19.97■□□□□ 0.79
COPS7B-209ENST00000412922 FBXO41Q8TF61 875 aa19.95■□□□□ 0.78
COPS7B-209ENST00000412922 REREQ9P2R6 1566 aa19.95■□□□□ 0.78
COPS7B-209ENST00000412922 CDC42BPBQ9Y5S2 1711 aa19.94■□□□□ 0.78
COPS7B-209ENST00000412922 CASKIN1Q8WXD9 1431 aa19.94■□□□□ 0.78
COPS7B-209ENST00000412922 PREX1Q8TCU6 1659 aa19.93■□□□□ 0.78
COPS7B-209ENST00000412922 DIP2CQ9Y2E4 1556 aa19.91■□□□□ 0.78
COPS7B-209ENST00000412922 ABCC1P33527 1531 aa19.91■□□□□ 0.78
COPS7B-209ENST00000412922 FYCO1Q9BQS8 1478 aa19.91■□□□□ 0.78
COPS7B-209ENST00000412922 ITSN2Q9NZM3 1697 aa19.9■□□□□ 0.78
COPS7B-209ENST00000412922 MLECQ14165 292 aa19.9■□□□□ 0.78
COPS7B-209ENST00000412922 MLH3Q9UHC1 1453 aa19.88■□□□□ 0.77
COPS7B-209ENST00000412922 ABCA6Q8N139 1617 aa19.88■□□□□ 0.77
COPS7B-209ENST00000412922 CDC42BPAQ5VT25 1732 aa19.86■□□□□ 0.77
COPS7B-209ENST00000412922 PLPPR3Q6T4P5 718 aa19.85■□□□□ 0.77
COPS7B-209ENST00000412922 AGLP35573 1532 aa19.85■□□□□ 0.77
COPS7B-209ENST00000412922 HSPA2P54652 639 aa19.83■□□□□ 0.77
COPS7B-209ENST00000412922 AFAP1Q8N556 730 aa19.83■□□□□ 0.77
COPS7B-209ENST00000412922 MYT1LQ9UL68 1186 aa19.82■□□□□ 0.76
COPS7B-209ENST00000412922 KIDINS220Q9ULH0 1771 aa19.8■□□□□ 0.76
COPS7B-209ENST00000412922 UHRF1BP1Q6BDS2 1440 aa19.79■□□□□ 0.76
COPS7B-209ENST00000412922 TRAPPC8Q9Y2L5 1435 aa19.79■□□□□ 0.76
COPS7B-209ENST00000412922 SETD1BQ9UPS6 1966 aaKnown RBP19.78■□□□□ 0.76
COPS7B-209ENST00000412922 C3P01024 1663 aa19.78■□□□□ 0.76
COPS7B-209ENST00000412922 SAMD9LQ8IVG5 1584 aa19.76■□□□□ 0.75
COPS7B-209ENST00000412922 CNTLNQ9NXG0 1405 aa19.76■□□□□ 0.75
COPS7B-209ENST00000412922 SYCP2Q9BX26 1530 aa19.75■□□□□ 0.75
COPS7B-209ENST00000412922 PLEKHH2Q8IVE3 1493 aa19.74■□□□□ 0.75
COPS7B-209ENST00000412922 ESF1Q9H501 851 aaKnown RBP19.73■□□□□ 0.75
COPS7B-209ENST00000412922 MROH2AA6NES4 1674 aa19.73■□□□□ 0.75
COPS7B-209ENST00000412922 GPATCH8Q9UKJ3 1502 aaKnown RBP19.71■□□□□ 0.75
COPS7B-209ENST00000412922 CEBPAP49715 358 aaPredicted RBP19.71■□□□□ 0.75
COPS7B-209ENST00000412922 STRCQ7RTU9 1775 aa19.71■□□□□ 0.75
COPS7B-209ENST00000412922 DMRT2Q9Y5R5 561 aa19.7■□□□□ 0.74
COPS7B-209ENST00000412922 INO80Q9ULG1 1556 aaPredicted RBP19.7■□□□□ 0.74
COPS7B-209ENST00000412922 ATP7AQ04656 1500 aa19.7■□□□□ 0.74
COPS7B-209ENST00000412922 KIAA1107Q9UPP5 1409 aa19.69■□□□□ 0.74
COPS7B-209ENST00000412922 CERKQ8TCT0 537 aa19.68■□□□□ 0.74
COPS7B-209ENST00000412922 EHBP1L1Q8N3D4 1523 aa19.67■□□□□ 0.74
COPS7B-209ENST00000412922 PLXNC1O60486 1568 aa19.67■□□□□ 0.74
COPS7B-209ENST00000412922 CCNB3Q8WWL7 1395 aa19.67■□□□□ 0.74
COPS7B-209ENST00000412922 MTUS2Q5JR59 1369 aa19.66■□□□□ 0.74
COPS7B-209ENST00000412922 ZNF777Q9ULD5 760 aaPredicted RBP19.66■□□□□ 0.74
COPS7B-209ENST00000412922 SPAG9O60271 1321 aaKnown RBP19.66■□□□□ 0.74
COPS7B-209ENST00000412922 NPATQ14207 1427 aa19.65■□□□□ 0.74
COPS7B-209ENST00000412922 SUPT6HQ7KZ85 1726 aaKnown RBP19.65■□□□□ 0.74
COPS7B-209ENST00000412922 PTPRTO14522 1441 aa19.63■□□□□ 0.73
COPS7B-209ENST00000412922 ADGBQ8N7X0 1667 aa19.63■□□□□ 0.73
COPS7B-209ENST00000412922 CFDP1Q9UEE9 299 aaPredicted RBP19.63■□□□□ 0.73
COPS7B-209ENST00000412922 TIAM1Q13009 1591 aa19.62■□□□□ 0.73
COPS7B-209ENST00000412922 A2MP01023 1474 aa19.61■□□□□ 0.73
COPS7B-209ENST00000412922 ZNF142P52746 1687 aaPredicted RBP19.59■□□□□ 0.73
COPS7B-209ENST00000412922 CLTCQ00610 1675 aaKnown RBP19.59■□□□□ 0.73
COPS7B-209ENST00000412922 NCOA1Q15788 1441 aa19.59■□□□□ 0.73
COPS7B-209ENST00000412922 HNRNPMP52272 730 aaKnown RBP eCLIP19.58■□□□□ 0.724e-7■■■■□ 19.8
COPS7B-209ENST00000412922 CEP162Q5TB80 1403 aa19.57■□□□□ 0.72
COPS7B-209ENST00000412922 MYO3AQ8NEV4 1616 aa19.57■□□□□ 0.72
COPS7B-209ENST00000412922 ZMYM3Q14202 1370 aa19.55■□□□□ 0.72
COPS7B-209ENST00000412922 CAMSAP1Q5T5Y3 1602 aa19.55■□□□□ 0.72
COPS7B-209ENST00000412922 IQSEC2Q5JU85 1478 aa19.54■□□□□ 0.72
COPS7B-209ENST00000412922 RTEL1-TNFRSF6BF6WH68 1400 aa19.53■□□□□ 0.72
COPS7B-209ENST00000412922 FAM135AQ9P2D6 1515 aa19.52■□□□□ 0.72
COPS7B-209ENST00000412922 PPP6R1Q9UPN7 881 aa19.52■□□□□ 0.72
COPS7B-209ENST00000412922 MBD5Q9P267 1494 aa19.52■□□□□ 0.71
COPS7B-209ENST00000412922 PLA2R1Q13018 1463 aa19.51■□□□□ 0.71
COPS7B-209ENST00000412922 CEP170BQ9Y4F5 1589 aaPredicted RBP19.51■□□□□ 0.71
COPS7B-209ENST00000412922 LTBP4Q8N2S1 1624 aa19.5■□□□□ 0.71
COPS7B-209ENST00000412922 CCDC141Q6ZP82 1450 aa19.49■□□□□ 0.71
COPS7B-209ENST00000412922 PTPRKQ15262 1439 aa19.49■□□□□ 0.71
COPS7B-209ENST00000412922 CAMSAP2Q08AD1 1489 aa19.47■□□□□ 0.71
COPS7B-209ENST00000412922 NCOA2Q15596 1464 aa19.47■□□□□ 0.71
COPS7B-209ENST00000412922 GGT6Q6P531 493 aa19.45■□□□□ 0.7
COPS7B-209ENST00000412922 DHX29Q7Z478 1369 aaKnown RBP19.44■□□□□ 0.7
COPS7B-209ENST00000412922 ZNF644Q9H582 1327 aaPredicted RBP19.44■□□□□ 0.7
COPS7B-209ENST00000412922 KDM5DQ9BY66 1539 aa19.44■□□□□ 0.7
COPS7B-209ENST00000412922 ARHGEF5Q12774 1597 aa19.44■□□□□ 0.7
COPS7B-209ENST00000412922 TCOF1Q13428 1488 aaKnown RBP19.43■□□□□ 0.7
COPS7B-209ENST00000412922 PKD2Q13563 968 aa19.43■□□□□ 0.7
COPS7B-209ENST00000412922 RSPH4AQ5TD94 716 aa19.43■□□□□ 0.7
COPS7B-209ENST00000412922 A2ML1A8K2U0 1454 aa19.41■□□□□ 0.7
COPS7B-209ENST00000412922 POLR1AO95602 1720 aaPredicted RBP19.39■□□□□ 0.69
COPS7B-209ENST00000412922 PZPP20742 1482 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms