RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 ROCK1Q13464 1354 aa35.54■■■■□ 3.28
VRK2-202ENST00000412104 PLEKHD1A6NEE1 506 aa35.49■■■■□ 3.27
VRK2-202ENST00000412104 CFDP1Q9UEE9 299 aaPredicted RBP35.48■■■■□ 3.27
VRK2-202ENST00000412104 CDC42BPAQ5VT25 1732 aa35.47■■■■□ 3.27
VRK2-202ENST00000412104 ABCC10Q5T3U5 1492 aa35.46■■■■□ 3.27
VRK2-202ENST00000412104 CROCC2H7BZ55 1655 aa35.42■■■■□ 3.26
VRK2-202ENST00000412104 MIER1Q8N108 512 aa35.41■■■■□ 3.26
VRK2-202ENST00000412104 DENND4BO75064 1496 aaPredicted RBP35.41■■■■□ 3.26
VRK2-202ENST00000412104 ERCC6L2Q5T890 1561 aa35.4■■■■□ 3.26
VRK2-202ENST00000412104 ADGBQ8N7X0 1667 aa35.4■■■■□ 3.26
VRK2-202ENST00000412104 CLASP1Q7Z460 1538 aa35.38■■■■□ 3.25
VRK2-202ENST00000412104 TONSLQ96HA7 1378 aa35.36■■■■□ 3.25
VRK2-202ENST00000412104 TRIM52Q96A61 297 aa35.36■■■■□ 3.25
VRK2-202ENST00000412104 PPP1R15AO75807 674 aaPredicted RBP35.35■■■■□ 3.25
VRK2-202ENST00000412104 ZNF777Q9ULD5 760 aaPredicted RBP35.33■■■■□ 3.25
VRK2-202ENST00000412104 ACIN1Q9UKV3 1341 aaKnown RBP35.3■■■■□ 3.24
VRK2-202ENST00000412104 ADGRL2O95490 1459 aa35.3■■■■□ 3.24
VRK2-202ENST00000412104 ABCC2Q92887 1545 aa35.29■■■■□ 3.24
VRK2-202ENST00000412104 NCOA1Q15788 1441 aa35.26■■■■□ 3.24
VRK2-202ENST00000412104 MPHOSPH9Q99550 1183 aa35.26■■■■□ 3.23
VRK2-202ENST00000412104 KDM5BQ9UGL1 1544 aa35.21■■■■□ 3.23
VRK2-202ENST00000412104 PREX2Q70Z35 1606 aa35.21■■■■□ 3.23
VRK2-202ENST00000412104 SHANK2Q9UPX8 1470 aa35.2■■■■□ 3.23
VRK2-202ENST00000412104 CDC42BPBQ9Y5S2 1711 aa35.18■■■■□ 3.22
VRK2-202ENST00000412104 ANKRD30AQ9BXX3 1397 aa35.16■■■■□ 3.22
VRK2-202ENST00000412104 CENPBP07199 599 aaPredicted RBP35.16■■■■□ 3.22
VRK2-202ENST00000412104 ARHGEF5Q12774 1597 aa35.14■■■■□ 3.22
VRK2-202ENST00000412104 TTC37Q6PGP7 1564 aa35.12■■■■□ 3.21
VRK2-202ENST00000412104 SAMD9LQ8IVG5 1584 aa35.12■■■■□ 3.21
VRK2-202ENST00000412104 C9orf84Q5VXU9 1444 aa35.11■■■■□ 3.21
VRK2-202ENST00000412104 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.09■■■■□ 3.21
VRK2-202ENST00000412104 PZPP20742 1482 aa35.08■■■■□ 3.21
VRK2-202ENST00000412104 UHRF1BP1LA0JNW5 1464 aa35.07■■■■□ 3.21
VRK2-202ENST00000412104 FOXD1Q16676 465 aa35.07■■■■□ 3.2
VRK2-202ENST00000412104 ZCCHC11Q5TAX3 1644 aaKnown RBP35.06■■■■□ 3.2
VRK2-202ENST00000412104 ANKRD30BQ9BXX2 1392 aa35.06■■■■□ 3.2
VRK2-202ENST00000412104 MBD5Q9P267 1494 aa35.06■■■■□ 3.2
VRK2-202ENST00000412104 SLC4A1APQ9BWU0 796 aaKnown RBP35.04■■■■□ 3.2
VRK2-202ENST00000412104 ANKRD50Q9ULJ7 1429 aa35.04■■■■□ 3.2
VRK2-202ENST00000412104 MYO5CQ9NQX4 1742 aa35.01■■■■□ 3.2
VRK2-202ENST00000412104 YTHDC1Q96MU7 727 aaKnown RBP35.01■■■■□ 3.2
VRK2-202ENST00000412104 SCAF1Q9H7N4 1312 aaKnown RBP35■■■■□ 3.19
VRK2-202ENST00000412104 CCDC141Q6ZP82 1450 aa35■■■■□ 3.19
VRK2-202ENST00000412104 RPRD2Q5VT52 1461 aaKnown RBP34.99■■■■□ 3.19
VRK2-202ENST00000412104 HNRNPMP52272 730 aaKnown RBP eCLIP34.99■■■■□ 3.19
VRK2-202ENST00000412104 ARHGAP5Q13017 1502 aa34.99■■■■□ 3.19
VRK2-202ENST00000412104 TSPY4P0CV99 314 aa34.98■■■■□ 3.19
VRK2-202ENST00000412104 TSPY10P0CW01 314 aa34.98■■■■□ 3.19
VRK2-202ENST00000412104 SYCP2Q9BX26 1530 aa34.94■■■■□ 3.18
VRK2-202ENST00000412104 HIRIP3Q9BW71 556 aaPredicted RBP34.92■■■■□ 3.18
VRK2-202ENST00000412104 KIF15Q9NS87 1388 aa34.91■■■■□ 3.18
VRK2-202ENST00000412104 TEX14Q8IWB6 1497 aa34.9■■■■□ 3.18
VRK2-202ENST00000412104 RSPH4AQ5TD94 716 aa34.89■■■■□ 3.18
VRK2-202ENST00000412104 KIAA1107Q9UPP5 1409 aa34.89■■■■□ 3.18
VRK2-202ENST00000412104 L3MBTL2Q969R5 705 aa34.89■■■■□ 3.18
VRK2-202ENST00000412104 KDM5DQ9BY66 1539 aa34.88■■■■□ 3.17
VRK2-202ENST00000412104 MAST1Q9Y2H9 1570 aa34.87■■■■□ 3.17
VRK2-202ENST00000412104 DDX10Q13206 875 aaKnown RBP34.85■■■■□ 3.17
VRK2-202ENST00000412104 KCNH8Q96L42 1107 aa34.85■■■■□ 3.17
VRK2-202ENST00000412104 PLEKHH2Q8IVE3 1493 aa34.84■■■■□ 3.17
VRK2-202ENST00000412104 PLCH2O75038 1416 aa34.8■■■■□ 3.16
VRK2-202ENST00000412104 NUP155O75694 1391 aa34.79■■■■□ 3.16
VRK2-202ENST00000412104 PKD2Q13563 968 aa34.79■■■■□ 3.16
VRK2-202ENST00000412104 PLXNC1O60486 1568 aa34.75■■■■□ 3.15
VRK2-202ENST00000412104 ARHGEF12Q9NZN5 1544 aa34.73■■■■□ 3.15
VRK2-202ENST00000412104 ABCC1P33527 1531 aa34.7■■■■□ 3.15
VRK2-202ENST00000412104 HSPA5P11021 654 aaKnown RBP34.67■■■■□ 3.14
VRK2-202ENST00000412104 WDR7Q9Y4E6 1490 aa34.67■■■■□ 3.14
VRK2-202ENST00000412104 ARAP3Q8WWN8 1544 aa34.66■■■■□ 3.14
VRK2-202ENST00000412104 NBPF8Q3BBV2 869 aa34.65■■■■□ 3.14
VRK2-202ENST00000412104 EFCAB2Q5VUJ9 269 aa34.65■■■■□ 3.14
VRK2-202ENST00000412104 UNC13BO14795 1591 aa34.65■■■■□ 3.14
VRK2-202ENST00000412104 FAM135AQ9P2D6 1515 aa34.64■■■■□ 3.14
VRK2-202ENST00000412104 EIF4G2P78344 907 aaKnown RBP eCLIP34.63■■■■□ 3.13
VRK2-202ENST00000412104 GTF3C3Q9Y5Q9 886 aa34.6■■■■□ 3.13
VRK2-202ENST00000412104 DUOX2Q9NRD8 1548 aa34.58■■■■□ 3.13
VRK2-202ENST00000412104 OSCARQ8IYS5 282 aa34.56■■■■□ 3.12
VRK2-202ENST00000412104 ABCA9Q8IUA7 1624 aa34.55■■■■□ 3.12
VRK2-202ENST00000412104 TRAPPC8Q9Y2L5 1435 aa34.54■■■■□ 3.12
VRK2-202ENST00000412104 ERBINQ96RT1 1412 aa34.51■■■■□ 3.12
VRK2-202ENST00000412104 IQGAP3Q86VI3 1631 aa34.51■■■■□ 3.12
VRK2-202ENST00000412104 WASHC2AQ641Q2 1341 aa34.51■■■■□ 3.11
VRK2-202ENST00000412104 ANP32CO43423 234 aa34.48■■■■□ 3.11
VRK2-202ENST00000412104 ASXL2Q76L83 1435 aa34.47■■■■□ 3.11
VRK2-202ENST00000412104 MAGI2Q86UL8 1455 aa34.47■■■■□ 3.11
VRK2-202ENST00000412104 SPATA31E1Q6ZUB1 1445 aa34.46■■■■□ 3.11
VRK2-202ENST00000412104 ZFYVE16Q7Z3T8 1539 aa34.43■■■■□ 3.1
VRK2-202ENST00000412104 FANCAO15360 1455 aa34.43■■■■□ 3.1
VRK2-202ENST00000412104 UHRF1BP1Q6BDS2 1440 aa34.43■■■■□ 3.1
VRK2-202ENST00000412104 POLR1AO95602 1720 aaPredicted RBP34.42■■■■□ 3.1
VRK2-202ENST00000412104 RTEL1-TNFRSF6BF6WH68 1400 aa34.41■■■■□ 3.1
VRK2-202ENST00000412104 CCER2I3L3R5 266 aa34.4■■■■□ 3.1
VRK2-202ENST00000412104 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.39■■■■□ 3.19e-6■□□□□ 10.7
VRK2-202ENST00000412104 SPAG9O60271 1321 aaKnown RBP34.38■■■■□ 3.09
VRK2-202ENST00000412104 CCDC7Q96M83 1385 aa34.36■■■■□ 3.09
VRK2-202ENST00000412104 ZNF326Q5BKZ1 582 aaKnown RBP34.36■■■■□ 3.09
VRK2-202ENST00000412104 RALGAPBQ86X10 1494 aa34.35■■■■□ 3.09
VRK2-202ENST00000412104 CCDC144AA2RUR9 1427 aa34.34■■■■□ 3.09
VRK2-202ENST00000412104 AFAP1Q8N556 730 aa34.34■■■■□ 3.09
VRK2-202ENST00000412104 INO80Q9ULG1 1556 aaPredicted RBP34.34■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms