RNA–Protein interactions for RNA: ENST00000410604.1

RNU2-39P-201, Transcript of RNA, U2 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU2-39P, Length 198 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-39P-201ENST00000410604 RIOK3O14730 519 aaKnown RBP9.68□□□□□ -0.86
RNU2-39P-201ENST00000410604 ZFP91Q96JP5 570 aaPredicted RBP9.68□□□□□ -0.86
RNU2-39P-201ENST00000410604 PHF8Q9UPP1 1060 aa9.68□□□□□ -0.86
RNU2-39P-201ENST00000410604 MYT1LQ9UL68 1186 aa9.67□□□□□ -0.86
RNU2-39P-201ENST00000410604 VGFO15240 615 aaPredicted RBP9.63□□□□□ -0.87
RNU2-39P-201ENST00000410604 ARSIQ5FYB1 569 aa9.63□□□□□ -0.87
RNU2-39P-201ENST00000410604 KHSRPQ92945 711 aaKnown RBP eCLIP9.59□□□□□ -0.87
RNU2-39P-201ENST00000410604 PTGER2P43116 358 aa9.58□□□□□ -0.88
RNU2-39P-201ENST00000410604 ZNF316A6NFI3 1004 aaPredicted RBP9.57□□□□□ -0.88
RNU2-39P-201ENST00000410604 FBXO22Q8NEZ5 403 aa9.57□□□□□ -0.88
RNU2-39P-201ENST00000410604 NLRP6P59044 892 aa9.56□□□□□ -0.88
RNU2-39P-201ENST00000410604 ANKRD13DQ6ZTN6 518 aa9.56□□□□□ -0.88
RNU2-39P-201ENST00000410604 BCL11BQ9C0K0 894 aaPredicted RBP9.53□□□□□ -0.88
RNU2-39P-201ENST00000410604 LSM11P83369 360 aaKnown RBP eCLIP9.52□□□□□ -0.89
RNU2-39P-201ENST00000410604 KIF3CO14782 793 aa9.51□□□□□ -0.89
RNU2-39P-201ENST00000410604 MFRPQ9BY79 579 aa9.51□□□□□ -0.89
RNU2-39P-201ENST00000410604 C2orf72A6NCS6 295 aa9.49□□□□□ -0.89
RNU2-39P-201ENST00000410604 STK24Q9Y6E0 443 aa9.49□□□□□ -0.89
RNU2-39P-201ENST00000410604 NUDT7P0C024 238 aa9.48□□□□□ -0.89
RNU2-39P-201ENST00000410604 POTEEQ6S8J3 1075 aa9.47□□□□□ -0.89
RNU2-39P-201ENST00000410604 TAOK2Q9UL54 1235 aa9.46□□□□□ -0.9
RNU2-39P-201ENST00000410604 PBX2P40425 430 aa9.45□□□□□ -0.9
RNU2-39P-201ENST00000410604 LHX6Q9UPM6 363 aa9.45□□□□□ -0.9
RNU2-39P-201ENST00000410604 PCDHGA4Q9Y5G9 962 aa9.44□□□□□ -0.9
RNU2-39P-201ENST00000410604 SLC34A2O95436 690 aa9.43□□□□□ -0.9
RNU2-39P-201ENST00000410604 AXIN2Q9Y2T1 843 aa9.43□□□□□ -0.9
RNU2-39P-201ENST00000410604 STK25O00506 426 aa9.42□□□□□ -0.9
RNU2-39P-201ENST00000410604 TMC2Q8TDI7 906 aa9.37□□□□□ -0.91
RNU2-39P-201ENST00000410604 PLA2G2EQ9NZK7 142 aa9.36□□□□□ -0.91
RNU2-39P-201ENST00000410604 ADGRD1Q6QNK2 874 aa9.35□□□□□ -0.91
RNU2-39P-201ENST00000410604 HCSTQ9UBK5 93 aa9.35□□□□□ -0.91
RNU2-39P-201ENST00000410604 ARHGAP33O14559 1287 aa9.34□□□□□ -0.91
RNU2-39P-201ENST00000410604 ECM2O94769 699 aaPredicted RBP9.34□□□□□ -0.91
RNU2-39P-201ENST00000410604 KDM4FA0A1W2PPD8 638 aa9.33□□□□□ -0.92
RNU2-39P-201ENST00000410604 PPP1R37O75864 691 aa9.33□□□□□ -0.92
RNU2-39P-201ENST00000410604 PSDA5PKW4 1024 aaPredicted RBP9.31□□□□□ -0.92
RNU2-39P-201ENST00000410604 RGL2O15211 777 aa9.31□□□□□ -0.92
RNU2-39P-201ENST00000410604 DMRTA1Q5VZB9 504 aa9.29□□□□□ -0.92
RNU2-39P-201ENST00000410604 TK2O00142 265 aa9.28□□□□□ -0.92
RNU2-39P-201ENST00000410604 HRO43593 1189 aa9.28□□□□□ -0.92
RNU2-39P-201ENST00000410604 PTCD2Q8WV60 388 aaKnown RBP9.28□□□□□ -0.92
RNU2-39P-201ENST00000410604 PSEN2P49810 448 aa9.27□□□□□ -0.93
RNU2-39P-201ENST00000410604 PKD2Q13563 968 aa9.27□□□□□ -0.93
RNU2-39P-201ENST00000410604 FOXK1P85037 733 aa9.24□□□□□ -0.93
RNU2-39P-201ENST00000410604 PLPP6Q8IY26 295 aa9.23□□□□□ -0.93
RNU2-39P-201ENST00000410604 PPP4R3BQ5MIZ7 849 aa9.21□□□□□ -0.94
RNU2-39P-201ENST00000410604 KCTD12Q96CX2 325 aaKnown RBP9.21□□□□□ -0.94
RNU2-39P-201ENST00000410604 GPHNQ9NQX3 736 aaPredicted RBP9.2□□□□□ -0.94
RNU2-39P-201ENST00000410604 DSG2Q14126 1118 aa9.19□□□□□ -0.94
RNU2-39P-201ENST00000410604 TBC1D12O60347 775 aa9.16□□□□□ -0.94
RNU2-39P-201ENST00000410604 KCNK17Q96T54 332 aa9.16□□□□□ -0.94
RNU2-39P-201ENST00000410604 STAC3Q96MF2 364 aa9.15□□□□□ -0.94
RNU2-39P-201ENST00000410604 VPS9D1Q9Y2B5 631 aa9.13□□□□□ -0.95
RNU2-39P-201ENST00000410604 KCNH8Q96L42 1107 aa9.12□□□□□ -0.95
RNU2-39P-201ENST00000410604 HS6ST3Q8IZP7 471 aa9.11□□□□□ -0.95
RNU2-39P-201ENST00000410604 OXER1Q8TDS5 423 aa9.11□□□□□ -0.95
RNU2-39P-201ENST00000410604 PTPN5P54829 565 aa9.1□□□□□ -0.95
RNU2-39P-201ENST00000410604 AMER1Q5JTC6 1135 aaPredicted RBP9.1□□□□□ -0.95
RNU2-39P-201ENST00000410604 ZNF454Q8N9F8 522 aa9.08□□□□□ -0.96
RNU2-39P-201ENST00000410604 UPF1Q92900 1129 aaKnown RBP eCLIP9.08□□□□□ -0.96
RNU2-39P-201ENST00000410604 SLC4A5Q9BY07 1137 aa9.08□□□□□ -0.96
RNU2-39P-201ENST00000410604 RTN4Q9NQC3 1192 aaKnown RBP9.08□□□□□ -0.96
RNU2-39P-201ENST00000410604 BCL2L12Q9HB09 334 aa9.07□□□□□ -0.96
RNU2-39P-201ENST00000410604 BHMG1C9JSJ3 638 aaPredicted RBP9.06□□□□□ -0.96
RNU2-39P-201ENST00000410604 IFFO2Q5TF58 517 aa9.05□□□□□ -0.96
RNU2-39P-201ENST00000410604 THSD4Q6ZMP0 1018 aa9.05□□□□□ -0.96
RNU2-39P-201ENST00000410604 FOSBP53539 338 aa9.04□□□□□ -0.96
RNU2-39P-201ENST00000410604 CRISPLD2Q9H0B8 497 aa9.04□□□□□ -0.96
RNU2-39P-201ENST00000410604 RGS20O76081 388 aa9.03□□□□□ -0.96
RNU2-39P-201ENST00000410604 PTPREP23469 700 aa9.02□□□□□ -0.97
RNU2-39P-201ENST00000410604 NKX1-1Q15270 411 aaPredicted RBP9.02□□□□□ -0.97
RNU2-39P-201ENST00000410604 PPP1R15BQ5SWA1 713 aa9.02□□□□□ -0.97
RNU2-39P-201ENST00000410604 ZBED2Q9BTP6 218 aa9.02□□□□□ -0.97
RNU2-39P-201ENST00000410604 CHGAP10645 457 aaKnown RBP9□□□□□ -0.97
RNU2-39P-201ENST00000410604 WNT2BQ93097 391 aa9□□□□□ -0.97
RNU2-39P-201ENST00000410604 ANO8Q9HCE9 1232 aaPredicted RBP9□□□□□ -0.97
RNU2-39P-201ENST00000410604 A0A0G2JS52 829 aa8.99□□□□□ -0.97
RNU2-39P-201ENST00000410604 MRPL50Q8N5N7 158 aaKnown RBP8.99□□□□□ -0.97
RNU2-39P-201ENST00000410604 DNAJC5Q9H3Z4 198 aa8.99□□□□□ -0.97
RNU2-39P-201ENST00000410604 GOLGA8CPA6NN73 597 aa8.98□□□□□ -0.97
RNU2-39P-201ENST00000410604 JPH4Q96JJ6 628 aa8.98□□□□□ -0.97
RNU2-39P-201ENST00000410604 IRX2Q9BZI1 471 aaPredicted RBP8.98□□□□□ -0.97
RNU2-39P-201ENST00000410604 NCKAP5LQ9HCH0 1330 aa8.98□□□□□ -0.97
RNU2-39P-201ENST00000410604 ADAM33Q9BZ11 813 aa8.97□□□□□ -0.97
RNU2-39P-201ENST00000410604 ZDHHC16Q969W1 377 aa8.96□□□□□ -0.98
RNU2-39P-201ENST00000410604 EVI5O60447 810 aa8.95□□□□□ -0.98
RNU2-39P-201ENST00000410604 NBPF3Q9H094 633 aa8.94□□□□□ -0.98
RNU2-39P-201ENST00000410604 RYDENQ9NUL5 291 aaKnown RBP8.94□□□□□ -0.98
RNU2-39P-201ENST00000410604 PDE4AP27815 886 aa8.93□□□□□ -0.98
RNU2-39P-201ENST00000410604 PPP1R3GB7ZBB8 358 aa8.88□□□□□ -0.99
RNU2-39P-201ENST00000410604 ITGBL1O95965 494 aaPredicted RBP8.88□□□□□ -0.99
RNU2-39P-201ENST00000410604 PROX2Q3B8N5 592 aa8.88□□□□□ -0.99
RNU2-39P-201ENST00000410604 LARP6Q9BRS8 491 aaKnown RBP8.88□□□□□ -0.99
RNU2-39P-201ENST00000410604 RABGEF1Q9UJ41 708 aa8.88□□□□□ -0.99
RNU2-39P-201ENST00000410604 MAP3K9P80192 1104 aa8.87□□□□□ -0.99
RNU2-39P-201ENST00000410604 DDX27Q96GQ7 796 aaKnown RBP8.87□□□□□ -0.99
RNU2-39P-201ENST00000410604 PCDHGA10Q9Y5H3 936 aa8.87□□□□□ -0.99
RNU2-39P-201ENST00000410604 COL9A1P20849 921 aa8.86□□□□□ -0.99
RNU2-39P-201ENST00000410604 ANKK1Q8NFD2 765 aa8.86□□□□□ -0.99
RNU2-39P-201ENST00000410604 EMILIN3Q9NT22 766 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms