RNA–Protein interactions for RNA: ENST00000408541.1

RNU6ATAC11P-201, Transcript of RNA, U6atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU6ATAC11P, Length 125 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC11P-201ENST00000408541 CCDC194A0A1B0GVG4 234 aa0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 HSPA1AP0DMV8 641 aaKnown RBP0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 HSPA1BP0DMV9 641 aaKnown RBP0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 VASPP50552 380 aaPredicted RBP0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 FXR1P51114 621 aaKnown RBP eCLIP0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 APLP1P51693 650 aa0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 FOXK2Q01167 660 aa0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 TSPOAP1O95153 1857 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 SYNGAP1Q96PV0 1343 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 PSDA5PKW4 1024 aaPredicted RBP0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 HOXB3P14651 431 aaPredicted RBP0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 RBMXP38159 391 aaKnown RBP0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 LBX1P52954 281 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 JMYQ8N9B5 988 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 SGPP1Q9BX95 441 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 KRTAP9-9Q9BYP9 154 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 KRTAP9-4Q9BYQ2 154 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 GAR1Q9NY12 217 aaKnown RBP0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 RAPGEF6Q8TEU7 1601 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 SZT2Q5T011 3432 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 ANKRD17O75179 2603 aaKnown RBP0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 PCF11O94913 1555 aaKnown RBP0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 EIF4G1Q04637 1599 aaKnown RBP0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 MEGF6O75095 1541 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 EYSQ5T1H1 3165 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 MED14O60244 1454 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 SNAPC4Q5SXM2 1469 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 ABCA13Q86UQ4 5058 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 VCANP13611 3396 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 UNC80Q8N2C7 3258 aa0.72□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 KMT2CQ8NEZ4 4911 aaKnown RBP0.72□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 CUL9Q8IWT3 2517 aa0.72□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 CELSR3Q9NYQ7 3312 aa0.72□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 HRCP23327 699 aa0.72□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 MAP3K12Q12852 859 aa0.72□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 TMEFF1Q8IYR6 380 aa0.72□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 KLRG1Q96E93 195 aa0.72□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 CFAP47Q6ZTR5 3102 aa0.72□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 ZNF292O60281 2723 aa0.72□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 ASH1LQ9NR48 2969 aaKnown RBP0.72□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 NESP48681 1621 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 CC2D2AQ9P2K1 1620 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 USP9XQ93008 2570 aaPredicted RBP0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 A0A1B0GTL3 188 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 POTEMA6NI47 508 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 NUTM2BA6NNL0 878 aaPredicted RBP0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 NUTM2EB1AL46 878 aaPredicted RBP0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 KCNQ2O43526 872 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 HTRA3P83110 453 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 NUTM2DQ5VT03 806 aaPredicted RBP0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 LHX8Q68G74 356 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 NUTM2AQ8IVF1 878 aaPredicted RBP0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 HCN4Q9Y3Q4 1203 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 TEP1Q99973 2627 aaKnown RBP0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 IQSEC2Q5JU85 1478 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 GPR98Q8WXG9 6306 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 UTRNP46939 3433 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 ATRNO75882 1429 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 ATRXP46100 2492 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 ANKRD11Q6UB99 2663 aaPredicted RBP0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 SPTBN5Q9NRC6 3674 aaKnown RBP0.7□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 MRE11P49959 708 aa0.7□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 RIPPLY3P57055 190 aa0.7□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 CCDC24Q8N4L8 307 aa0.7□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 TOP2BQ02880 1626 aa0.7□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 NHSL1Q5SYE7 1610 aa0.7□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 RYR2Q92736 4967 aa0.7□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 RANBP2P49792 3224 aaKnown RBP0.69□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 KALRNO60229 2985 aa0.69□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 DCAF8L2P0C7V8 631 aa0.69□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 RARAP10276 462 aa0.69□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.69□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 PPP1R1BQ9UD71 204 aaPredicted RBP0.69□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 DMRT2Q9Y5R5 561 aa0.69□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 CAMTA1Q9Y6Y1 1673 aa0.69□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 FAM83GA6ND36 823 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 LUC7L3O95232 432 aaKnown RBP0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 C8BP07358 591 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 RXRBP28702 533 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 ADRA1BP35368 520 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 PTPN5P54829 565 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 PHF6Q8IWS0 365 aaKnown RBP eCLIP0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 RUNDC1Q96C34 613 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 CNTNAP3BQ96NU0 1288 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 CNTNAP3Q9BZ76 1288 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 FZD8Q9H461 694 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 GPBP1L1Q9HC44 474 aaPredicted RBP0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 PRDM10Q9NQV6 1147 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 SH2B1Q9NRF2 756 aaPredicted RBP0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 KCNK4Q9NYG8 393 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 EPG5Q9HCE0 2579 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 HERC1Q15751 4861 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 COL6A5A8TX70 2615 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 FLNBO75369 2602 aaKnown RBP0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 AHDC1Q5TGY3 1603 aaPredicted RBP0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 SHROOM4Q9ULL8 1493 aa0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 KIF7Q2M1P5 1343 aa0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 GCN1Q92616 2671 aaKnown RBP0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 DNAH12Q6ZR08 3092 aa0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 FHOD3Q2V2M9 1422 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms