RNA–Protein interactions for RNA: ENST00000408541.1

RNU6ATAC11P-201, Transcript of RNA, U6atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU6ATAC11P, Length 125 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC11P-201ENST00000408541 CCDC194A0A1B0GVG4 234 aa0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 HSPA1AP0DMV8 641 aaKnown RBP0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 HSPA1BP0DMV9 641 aaKnown RBP0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 VASPP50552 380 aaPredicted RBP0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 FXR1P51114 621 aaKnown RBP eCLIP0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 APLP1P51693 650 aa0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 FOXK2Q01167 660 aa0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 TSPOAP1O95153 1857 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 SYNGAP1Q96PV0 1343 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 PSDA5PKW4 1024 aaPredicted RBP0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 HOXB3P14651 431 aaPredicted RBP0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 RBMXP38159 391 aaKnown RBP0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 LBX1P52954 281 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 JMYQ8N9B5 988 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 SGPP1Q9BX95 441 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 KRTAP9-9Q9BYP9 154 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 KRTAP9-4Q9BYQ2 154 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 GAR1Q9NY12 217 aaKnown RBP0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 RAPGEF6Q8TEU7 1601 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 SZT2Q5T011 3432 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 ANKRD17O75179 2603 aaKnown RBP0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 PCF11O94913 1555 aaKnown RBP0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 EIF4G1Q04637 1599 aaKnown RBP0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 MEGF6O75095 1541 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 EYSQ5T1H1 3165 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 MED14O60244 1454 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 SNAPC4Q5SXM2 1469 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 ABCA13Q86UQ4 5058 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 VCANP13611 3396 aa0.73□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 UNC80Q8N2C7 3258 aa0.72□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 KMT2CQ8NEZ4 4911 aaKnown RBP0.72□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 CUL9Q8IWT3 2517 aa0.72□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 CELSR3Q9NYQ7 3312 aa0.72□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 HRCP23327 699 aa0.72□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 MAP3K12Q12852 859 aa0.72□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 TMEFF1Q8IYR6 380 aa0.72□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 KLRG1Q96E93 195 aa0.72□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 CFAP47Q6ZTR5 3102 aa0.72□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 ZNF292O60281 2723 aa0.72□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 ASH1LQ9NR48 2969 aaKnown RBP0.72□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 NESP48681 1621 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 CC2D2AQ9P2K1 1620 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 USP9XQ93008 2570 aaPredicted RBP0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 A0A1B0GTL3 188 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 POTEMA6NI47 508 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 NUTM2BA6NNL0 878 aaPredicted RBP0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 NUTM2EB1AL46 878 aaPredicted RBP0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 KCNQ2O43526 872 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 HTRA3P83110 453 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 NUTM2DQ5VT03 806 aaPredicted RBP0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 LHX8Q68G74 356 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 NUTM2AQ8IVF1 878 aaPredicted RBP0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 HCN4Q9Y3Q4 1203 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 TEP1Q99973 2627 aaKnown RBP0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 IQSEC2Q5JU85 1478 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 GPR98Q8WXG9 6306 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 UTRNP46939 3433 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 ATRNO75882 1429 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 ATRXP46100 2492 aa0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 ANKRD11Q6UB99 2663 aaPredicted RBP0.71□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 SPTBN5Q9NRC6 3674 aaKnown RBP0.7□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 MRE11P49959 708 aa0.7□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 RIPPLY3P57055 190 aa0.7□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 CCDC24Q8N4L8 307 aa0.7□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 TOP2BQ02880 1626 aa0.7□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 NHSL1Q5SYE7 1610 aa0.7□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 RYR2Q92736 4967 aa0.7□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 RANBP2P49792 3224 aaKnown RBP0.69□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 KALRNO60229 2985 aa0.69□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 DCAF8L2P0C7V8 631 aa0.69□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 RARAP10276 462 aa0.69□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.69□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 PPP1R1BQ9UD71 204 aaPredicted RBP0.69□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 DMRT2Q9Y5R5 561 aa0.69□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 CAMTA1Q9Y6Y1 1673 aa0.69□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 FAM83GA6ND36 823 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 LUC7L3O95232 432 aaKnown RBP0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 C8BP07358 591 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 RXRBP28702 533 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 ADRA1BP35368 520 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 PTPN5P54829 565 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 PHF6Q8IWS0 365 aaKnown RBP eCLIP0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 RUNDC1Q96C34 613 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 CNTNAP3BQ96NU0 1288 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 CNTNAP3Q9BZ76 1288 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 FZD8Q9H461 694 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 GPBP1L1Q9HC44 474 aaPredicted RBP0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 PRDM10Q9NQV6 1147 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 SH2B1Q9NRF2 756 aaPredicted RBP0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 KCNK4Q9NYG8 393 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 EPG5Q9HCE0 2579 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 HERC1Q15751 4861 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 COL6A5A8TX70 2615 aa0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 FLNBO75369 2602 aaKnown RBP0.68□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 AHDC1Q5TGY3 1603 aaPredicted RBP0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 SHROOM4Q9ULL8 1493 aa0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 KIF7Q2M1P5 1343 aa0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 GCN1Q92616 2671 aaKnown RBP0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 DNAH12Q6ZR08 3092 aa0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 FHOD3Q2V2M9 1422 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms