RNA–Protein interactions for RNA: ENST00000407439.7

MRE11-204, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 2 BASIC

Gene MRE11, Length 2,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-204ENST00000407439 PRG4Q92954 1404 aaPredicted RBP9.26□□□□□ -0.93
MRE11-204ENST00000407439 ITSN2Q9NZM3 1697 aa9.26□□□□□ -0.93
MRE11-204ENST00000407439 DNAJC5Q9H3Z4 198 aa9.26□□□□□ -0.93
MRE11-204ENST00000407439 SIN3AQ96ST3 1273 aa9.25□□□□□ -0.93
MRE11-204ENST00000407439 ABCC5O15440 1437 aa9.25□□□□□ -0.93
MRE11-204ENST00000407439 GPATCH8Q9UKJ3 1502 aaKnown RBP9.25□□□□□ -0.93
MRE11-204ENST00000407439 SHROOM2Q13796 1616 aa9.24□□□□□ -0.93
MRE11-204ENST00000407439 KIF14Q15058 1648 aa9.23□□□□□ -0.93
MRE11-204ENST00000407439 MIER1Q8N108 512 aa9.23□□□□□ -0.93
MRE11-204ENST00000407439 ATP10BO94823 1461 aa9.23□□□□□ -0.93
MRE11-204ENST00000407439 CAMSAP2Q08AD1 1489 aa9.23□□□□□ -0.93
MRE11-204ENST00000407439 CENPBP07199 599 aaPredicted RBP9.23□□□□□ -0.93
MRE11-204ENST00000407439 RRP7BPQ9NSQ0 103 aa9.23□□□□□ -0.93
MRE11-204ENST00000407439 CHD1O14646 1710 aa9.23□□□□□ -0.93
MRE11-204ENST00000407439 DENND4BO75064 1496 aaPredicted RBP9.22□□□□□ -0.93
MRE11-204ENST00000407439 ABCC10Q5T3U5 1492 aa9.22□□□□□ -0.93
MRE11-204ENST00000407439 PTPRGP23470 1445 aa9.22□□□□□ -0.93
MRE11-204ENST00000407439 NEUROD1Q13562 356 aa9.22□□□□□ -0.93
MRE11-204ENST00000407439 CHIC2Q9UKJ5 165 aa9.22□□□□□ -0.93
MRE11-204ENST00000407439 TONSLQ96HA7 1378 aa9.22□□□□□ -0.93
MRE11-204ENST00000407439 PPP1R15AO75807 674 aaPredicted RBP9.21□□□□□ -0.93
MRE11-204ENST00000407439 ADGRL2O95490 1459 aa9.21□□□□□ -0.93
MRE11-204ENST00000407439 KDM6BO15054 1643 aa9.21□□□□□ -0.93
MRE11-204ENST00000407439 CFDP1Q9UEE9 299 aaPredicted RBP9.21□□□□□ -0.94
MRE11-204ENST00000407439 ZNF644Q9H582 1327 aaPredicted RBP9.21□□□□□ -0.94
MRE11-204ENST00000407439 PLEKHD1A6NEE1 506 aa9.2□□□□□ -0.94
MRE11-204ENST00000407439 KDM5BQ9UGL1 1544 aa9.19□□□□□ -0.94
MRE11-204ENST00000407439 SHANK2Q9UPX8 1470 aa9.19□□□□□ -0.94
MRE11-204ENST00000407439 CROCC2H7BZ55 1655 aa9.19□□□□□ -0.94
MRE11-204ENST00000407439 NCOA1Q15788 1441 aa9.19□□□□□ -0.94
MRE11-204ENST00000407439 CDC42BPAQ5VT25 1732 aa9.18□□□□□ -0.94
MRE11-204ENST00000407439 ADGBQ8N7X0 1667 aa9.18□□□□□ -0.94
MRE11-204ENST00000407439 MPHOSPH9Q99550 1183 aa9.17□□□□□ -0.94
MRE11-204ENST00000407439 SCAF1Q9H7N4 1312 aaKnown RBP9.16□□□□□ -0.94
MRE11-204ENST00000407439 CLASP1Q7Z460 1538 aa9.16□□□□□ -0.94
MRE11-204ENST00000407439 ABCC2Q92887 1545 aa9.16□□□□□ -0.94
MRE11-204ENST00000407439 TRIM52Q96A61 297 aa9.16□□□□□ -0.94
MRE11-204ENST00000407439 ANKRD30AQ9BXX3 1397 aa9.15□□□□□ -0.94
MRE11-204ENST00000407439 ARHGEF5Q12774 1597 aa9.14□□□□□ -0.95
MRE11-204ENST00000407439 ANKRD30BQ9BXX2 1392 aa9.14□□□□□ -0.95
MRE11-204ENST00000407439 RPRD2Q5VT52 1461 aaKnown RBP9.14□□□□□ -0.95
MRE11-204ENST00000407439 PREX2Q70Z35 1606 aa9.14□□□□□ -0.95
MRE11-204ENST00000407439 C9orf84Q5VXU9 1444 aa9.13□□□□□ -0.95
MRE11-204ENST00000407439 PZPP20742 1482 aa9.13□□□□□ -0.95
MRE11-204ENST00000407439 MBD5Q9P267 1494 aa9.13□□□□□ -0.95
MRE11-204ENST00000407439 ERCC6L2Q5T890 1561 aa9.13□□□□□ -0.95
MRE11-204ENST00000407439 ANKRD50Q9ULJ7 1429 aa9.12□□□□□ -0.95
MRE11-204ENST00000407439 ZNF777Q9ULD5 760 aaPredicted RBP9.12□□□□□ -0.95
MRE11-204ENST00000407439 UHRF1BP1LA0JNW5 1464 aa9.12□□□□□ -0.95
MRE11-204ENST00000407439 TEX14Q8IWB6 1497 aa9.11□□□□□ -0.95
MRE11-204ENST00000407439 SLC24A1O60721 1099 aa9.11□□□□□ -0.95
MRE11-204ENST00000407439 CNKSR2Q8WXI2 1034 aa9.11□□□□□ -0.95
MRE11-204ENST00000407439 CCDC141Q6ZP82 1450 aa9.11□□□□□ -0.95
MRE11-204ENST00000407439 SAMD9LQ8IVG5 1584 aa9.1□□□□□ -0.95
MRE11-204ENST00000407439 KDM5DQ9BY66 1539 aa9.1□□□□□ -0.95
MRE11-204ENST00000407439 RSPH4AQ5TD94 716 aa9.1□□□□□ -0.95
MRE11-204ENST00000407439 CDC42BPBQ9Y5S2 1711 aa9.1□□□□□ -0.95
MRE11-204ENST00000407439 YTHDC1Q96MU7 727 aaKnown RBP9.09□□□□□ -0.95
MRE11-204ENST00000407439 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.09□□□□□ -0.95
MRE11-204ENST00000407439 KIAA1107Q9UPP5 1409 aa9.09□□□□□ -0.95
MRE11-204ENST00000407439 TTC37Q6PGP7 1564 aa9.09□□□□□ -0.95
MRE11-204ENST00000407439 TSPY4P0CV99 314 aa9.08□□□□□ -0.96
MRE11-204ENST00000407439 TSPY10P0CW01 314 aa9.08□□□□□ -0.96
MRE11-204ENST00000407439 KIF15Q9NS87 1388 aa9.08□□□□□ -0.96
MRE11-204ENST00000407439 PLEKHH2Q8IVE3 1493 aa9.08□□□□□ -0.96
MRE11-204ENST00000407439 MAST1Q9Y2H9 1570 aa9.07□□□□□ -0.96
MRE11-204ENST00000407439 L3MBTL2Q969R5 705 aa9.07□□□□□ -0.96
MRE11-204ENST00000407439 ARHGAP5Q13017 1502 aa9.06□□□□□ -0.96
MRE11-204ENST00000407439 DDX10Q13206 875 aaKnown RBP9.06□□□□□ -0.96
MRE11-204ENST00000407439 SYCP2Q9BX26 1530 aa9.06□□□□□ -0.96
MRE11-204ENST00000407439 ZCCHC11Q5TAX3 1644 aaKnown RBP9.06□□□□□ -0.96
MRE11-204ENST00000407439 MYO5CQ9NQX4 1742 aa9.06□□□□□ -0.96
MRE11-204ENST00000407439 HNRNPMP52272 730 aaKnown RBP eCLIP9.05□□□□□ -0.96
MRE11-204ENST00000407439 GTF3C3Q9Y5Q9 886 aa9.05□□□□□ -0.96
MRE11-204ENST00000407439 PLCH2O75038 1416 aa9.04□□□□□ -0.96
MRE11-204ENST00000407439 PLXNC1O60486 1568 aa9.04□□□□□ -0.96
MRE11-204ENST00000407439 NUP155O75694 1391 aa9.04□□□□□ -0.96
MRE11-204ENST00000407439 ARAP3Q8WWN8 1544 aa9.04□□□□□ -0.96
MRE11-204ENST00000407439 RTN4Q9NQC3 1192 aaKnown RBP9.04□□□□□ -0.96
MRE11-204ENST00000407439 EIF4G2P78344 907 aaKnown RBP eCLIP9.03□□□□□ -0.96
MRE11-204ENST00000407439 PKD2Q13563 968 aa9.03□□□□□ -0.96
MRE11-204ENST00000407439 HIRIP3Q9BW71 556 aaPredicted RBP9.03□□□□□ -0.96
MRE11-204ENST00000407439 ARHGEF12Q9NZN5 1544 aa9.02□□□□□ -0.97
MRE11-204ENST00000407439 FOXD4L1Q9NU39 408 aa9.02□□□□□ -0.97
MRE11-204ENST00000407439 SPATA31E1Q6ZUB1 1445 aa9.02□□□□□ -0.97
MRE11-204ENST00000407439 CCER2I3L3R5 266 aa9.01□□□□□ -0.97
MRE11-204ENST00000407439 HSPA5P11021 654 aaKnown RBP9.01□□□□□ -0.97
MRE11-204ENST00000407439 ABCC1P33527 1531 aa9.01□□□□□ -0.97
MRE11-204ENST00000407439 UNC13BO14795 1591 aa9.01□□□□□ -0.97
MRE11-204ENST00000407439 FAM135AQ9P2D6 1515 aa9.01□□□□□ -0.97
MRE11-204ENST00000407439 NBPF8Q3BBV2 869 aa9□□□□□ -0.97
MRE11-204ENST00000407439 WASHC2AQ641Q2 1341 aa9□□□□□ -0.97
MRE11-204ENST00000407439 ANP32CO43423 234 aa8.99□□□□□ -0.97
MRE11-204ENST00000407439 UHRF1BP1Q6BDS2 1440 aa8.99□□□□□ -0.97
MRE11-204ENST00000407439 MAGI2Q86UL8 1455 aa8.99□□□□□ -0.97
MRE11-204ENST00000407439 ERBINQ96RT1 1412 aa8.99□□□□□ -0.97
MRE11-204ENST00000407439 DUOX2Q9NRD8 1548 aa8.99□□□□□ -0.97
MRE11-204ENST00000407439 WDR7Q9Y4E6 1490 aa8.99□□□□□ -0.97
MRE11-204ENST00000407439 EFCAB2Q5VUJ9 269 aa8.99□□□□□ -0.97
MRE11-204ENST00000407439 KCNH8Q96L42 1107 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms