RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 SAMD9LQ8IVG5 1584 aa16.3■□□□□ 0.2
TSPAN9-202ENST00000407263 ADGRL1O94910 1474 aa16.3■□□□□ 0.2
TSPAN9-202ENST00000407263 ABCC1P33527 1531 aa16.29■□□□□ 0.2
TSPAN9-202ENST00000407263 AKNAQ7Z591 1439 aa16.29■□□□□ 0.2
TSPAN9-202ENST00000407263 MAP3K1Q13233 1512 aa16.29■□□□□ 0.2
TSPAN9-202ENST00000407263 LRRC9Q6ZRR7 1453 aa16.29■□□□□ 0.2
TSPAN9-202ENST00000407263 NCOA2Q15596 1464 aa16.27■□□□□ 0.19
TSPAN9-202ENST00000407263 ARHGEF40Q8TER5 1519 aa16.26■□□□□ 0.19
TSPAN9-202ENST00000407263 DENND4BO75064 1496 aaPredicted RBP16.25■□□□□ 0.19
TSPAN9-202ENST00000407263 PHLDB1Q86UU1 1377 aa16.25■□□□□ 0.19
TSPAN9-202ENST00000407263 ZMYM4Q5VZL5 1548 aa16.24■□□□□ 0.19
TSPAN9-202ENST00000407263 SYCP2Q9BX26 1530 aa16.24■□□□□ 0.19
TSPAN9-202ENST00000407263 GPATCH8Q9UKJ3 1502 aaKnown RBP16.24■□□□□ 0.19
TSPAN9-202ENST00000407263 POGZQ7Z3K3 1410 aa16.24■□□□□ 0.19
TSPAN9-202ENST00000407263 CCNB3Q8WWL7 1395 aa16.23■□□□□ 0.19
TSPAN9-202ENST00000407263 HECW2Q9P2P5 1572 aa16.22■□□□□ 0.19
TSPAN9-202ENST00000407263 SCAPERQ9BY12 1400 aa16.21■□□□□ 0.19
TSPAN9-202ENST00000407263 KDM5CP41229 1560 aa16.21■□□□□ 0.18
TSPAN9-202ENST00000407263 ZFYVE16Q7Z3T8 1539 aa16.2■□□□□ 0.18
TSPAN9-202ENST00000407263 RAPGEF3O95398 923 aa16.2■□□□□ 0.18
TSPAN9-202ENST00000407263 ARHGEF12Q9NZN5 1544 aa16.19■□□□□ 0.18
TSPAN9-202ENST00000407263 SIGLEC1Q9BZZ2 1709 aa16.19■□□□□ 0.18
TSPAN9-202ENST00000407263 EFCAB2Q5VUJ9 269 aa16.19■□□□□ 0.18
TSPAN9-202ENST00000407263 ABCA6Q8N139 1617 aa16.19■□□□□ 0.18
TSPAN9-202ENST00000407263 APLP2Q06481 763 aa16.18■□□□□ 0.18
TSPAN9-202ENST00000407263 KANK4Q5T7N3 995 aaPredicted RBP16.18■□□□□ 0.18
TSPAN9-202ENST00000407263 ZNF518AQ6AHZ1 1483 aa16.17■□□□□ 0.18
TSPAN9-202ENST00000407263 CAMSAP2Q08AD1 1489 aa16.16■□□□□ 0.18
TSPAN9-202ENST00000407263 ZNF777Q9ULD5 760 aaPredicted RBP16.16■□□□□ 0.18
TSPAN9-202ENST00000407263 KIDINS220Q9ULH0 1771 aa16.15■□□□□ 0.18
TSPAN9-202ENST00000407263 INO80Q9ULG1 1556 aaPredicted RBP16.14■□□□□ 0.17
TSPAN9-202ENST00000407263 DIP2CQ9Y2E4 1556 aa16.14■□□□□ 0.17
TSPAN9-202ENST00000407263 YEATS2Q9ULM3 1422 aa16.14■□□□□ 0.17
TSPAN9-202ENST00000407263 TRAPPC8Q9Y2L5 1435 aa16.14■□□□□ 0.17
TSPAN9-202ENST00000407263 CFDP1Q9UEE9 299 aaPredicted RBP16.13■□□□□ 0.17
TSPAN9-202ENST00000407263 PLEKHH2Q8IVE3 1493 aa16.13■□□□□ 0.17
TSPAN9-202ENST00000407263 PTPN23Q9H3S7 1636 aa16.12■□□□□ 0.17
TSPAN9-202ENST00000407263 CROCC2H7BZ55 1655 aa16.12■□□□□ 0.17
TSPAN9-202ENST00000407263 MYOM3Q5VTT5 1437 aa16.11■□□□□ 0.17
TSPAN9-202ENST00000407263 ADGBQ8N7X0 1667 aa16.11■□□□□ 0.17
TSPAN9-202ENST00000407263 BCORL1Q5H9F3 1711 aa16.11■□□□□ 0.17
TSPAN9-202ENST00000407263 ATP7AQ04656 1500 aa16.1■□□□□ 0.17
TSPAN9-202ENST00000407263 MAGI2Q86UL8 1455 aa16.1■□□□□ 0.17
TSPAN9-202ENST00000407263 ARHGEF5Q12774 1597 aa16.09■□□□□ 0.17
TSPAN9-202ENST00000407263 ZNF644Q9H582 1327 aaPredicted RBP16.08■□□□□ 0.16
TSPAN9-202ENST00000407263 FER1L4A9Z1Z3 1794 aa16.08■□□□□ 0.16
TSPAN9-202ENST00000407263 KIAA1107Q9UPP5 1409 aa16.07■□□□□ 0.16
TSPAN9-202ENST00000407263 MADDQ8WXG6 1647 aa16.06■□□□□ 0.16
TSPAN9-202ENST00000407263 CCDC141Q6ZP82 1450 aa16.06■□□□□ 0.16
TSPAN9-202ENST00000407263 AFAP1Q8N556 730 aa16.06■□□□□ 0.16
TSPAN9-202ENST00000407263 ADAMTSL3P82987 1691 aa16.05■□□□□ 0.16
TSPAN9-202ENST00000407263 RIMS1Q86UR5 1692 aaKnown RBP16.05■□□□□ 0.16
TSPAN9-202ENST00000407263 MBD5Q9P267 1494 aa16.05■□□□□ 0.16
TSPAN9-202ENST00000407263 MLH3Q9UHC1 1453 aa16.05■□□□□ 0.16
TSPAN9-202ENST00000407263 C9orf84Q5VXU9 1444 aa16.05■□□□□ 0.16
TSPAN9-202ENST00000407263 HNRNPMP52272 730 aaKnown RBP eCLIP16.05■□□□□ 0.16
TSPAN9-202ENST00000407263 MYT1LQ9UL68 1186 aa16.05■□□□□ 0.16
TSPAN9-202ENST00000407263 REREQ9P2R6 1566 aa16.04■□□□□ 0.16
TSPAN9-202ENST00000407263 FGD6Q6ZV73 1430 aa16.03■□□□□ 0.16
TSPAN9-202ENST00000407263 MIA2Q96PC5 1412 aa16.03■□□□□ 0.16
TSPAN9-202ENST00000407263 DNMT1P26358 1616 aaKnown RBP16.03■□□□□ 0.16
TSPAN9-202ENST00000407263 PPARGC1BQ86YN6 1023 aaKnown RBP16.02■□□□□ 0.16
TSPAN9-202ENST00000407263 ATP10AO60312 1499 aa16.02■□□□□ 0.15
TSPAN9-202ENST00000407263 PLXNC1O60486 1568 aa16■□□□□ 0.15
TSPAN9-202ENST00000407263 MAST1Q9Y2H9 1570 aa16■□□□□ 0.15
TSPAN9-202ENST00000407263 SPAG9O60271 1321 aaKnown RBP15.99■□□□□ 0.15
TSPAN9-202ENST00000407263 ARID4BQ4LE39 1312 aaPredicted RBP15.99■□□□□ 0.15
TSPAN9-202ENST00000407263 TCOF1Q13428 1488 aaKnown RBP15.99■□□□□ 0.15
TSPAN9-202ENST00000407263 KDM4FA0A1W2PPD8 638 aa15.97■□□□□ 0.15
TSPAN9-202ENST00000407263 A2MP01023 1474 aa15.94■□□□□ 0.14
TSPAN9-202ENST00000407263 AGLP35573 1532 aa15.94■□□□□ 0.14
TSPAN9-202ENST00000407263 DAPK1P53355 1430 aa15.94■□□□□ 0.14
TSPAN9-202ENST00000407263 SHANK2Q9UPX8 1470 aa15.93■□□□□ 0.14
TSPAN9-202ENST00000407263 MLECQ14165 292 aa15.92■□□□□ 0.14
TSPAN9-202ENST00000407263 AEBP2Q6ZN18 517 aaPredicted RBP15.92■□□□□ 0.14
TSPAN9-202ENST00000407263 RTEL1-TNFRSF6BF6WH68 1400 aa15.92■□□□□ 0.14
TSPAN9-202ENST00000407263 CLTCQ00610 1675 aaKnown RBP15.92■□□□□ 0.14
TSPAN9-202ENST00000407263 ABCC5O15440 1437 aa15.91■□□□□ 0.14
TSPAN9-202ENST00000407263 EIF2AK4Q9P2K8 1649 aaKnown RBP15.9■□□□□ 0.14
TSPAN9-202ENST00000407263 C3P01024 1663 aa15.89■□□□□ 0.13
TSPAN9-202ENST00000407263 FAM50AQ14320 339 aaKnown RBP15.89■□□□□ 0.13
TSPAN9-202ENST00000407263 PTPRMP28827 1452 aa15.88■□□□□ 0.13
TSPAN9-202ENST00000407263 MROH2AA6NES4 1674 aa15.88■□□□□ 0.13
TSPAN9-202ENST00000407263 CEP152O94986 1710 aa15.87■□□□□ 0.13
TSPAN9-202ENST00000407263 RNF17Q9BXT8 1623 aaKnown RBP15.86■□□□□ 0.13
TSPAN9-202ENST00000407263 TSPY4P0CV99 314 aa15.85■□□□□ 0.13
TSPAN9-202ENST00000407263 TSPY10P0CW01 314 aa15.85■□□□□ 0.13
TSPAN9-202ENST00000407263 RSPH4AQ5TD94 716 aa15.85■□□□□ 0.13
TSPAN9-202ENST00000407263 DUOX2Q9NRD8 1548 aa15.84■□□□□ 0.13
TSPAN9-202ENST00000407263 MROH1Q8NDA8 1641 aa15.83■□□□□ 0.13
TSPAN9-202ENST00000407263 ZC3H13Q5T200 1668 aaKnown RBP15.83■□□□□ 0.12
TSPAN9-202ENST00000407263 PLPPR3Q6T4P5 718 aa15.82■□□□□ 0.12
TSPAN9-202ENST00000407263 KIF15Q9NS87 1388 aa15.82■□□□□ 0.12
TSPAN9-202ENST00000407263 RRBP1Q9P2E9 1410 aaKnown RBP15.82■□□□□ 0.12
TSPAN9-202ENST00000407263 ADGRL2O95490 1459 aa15.82■□□□□ 0.12
TSPAN9-202ENST00000407263 DEPDC5O75140 1603 aa15.81■□□□□ 0.12
TSPAN9-202ENST00000407263 DHX29Q7Z478 1369 aaKnown RBP15.81■□□□□ 0.12
TSPAN9-202ENST00000407263 PREX1Q8TCU6 1659 aa15.8■□□□□ 0.12
TSPAN9-202ENST00000407263 CHIC2Q9UKJ5 165 aa15.8■□□□□ 0.12
TSPAN9-202ENST00000407263 GCC2Q8IWJ2 1684 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms