RNA–Protein interactions for RNA: ENST00000407246.6

SCP2-204, Transcript of sterol carrier protein 2, humanhuman

TSL 2 BASIC

Gene SCP2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-204ENST00000407246 PLEKHD1A6NEE1 506 aa23.72■■□□□ 1.39
SCP2-204ENST00000407246 GPATCH8Q9UKJ3 1502 aaKnown RBP23.72■■□□□ 1.39
SCP2-204ENST00000407246 CLASP1Q7Z460 1538 aa23.7■■□□□ 1.38
SCP2-204ENST00000407246 DAPK1P53355 1430 aa23.69■■□□□ 1.38
SCP2-204ENST00000407246 KDM6BO15054 1643 aa23.69■■□□□ 1.38
SCP2-204ENST00000407246 CFDP1Q9UEE9 299 aaPredicted RBP23.69■■□□□ 1.38
SCP2-204ENST00000407246 ABCC5O15440 1437 aa23.68■■□□□ 1.38
SCP2-204ENST00000407246 UACAQ9BZF9 1416 aa23.68■■□□□ 1.38
SCP2-204ENST00000407246 GCC2Q8IWJ2 1684 aa23.68■■□□□ 1.38
SCP2-204ENST00000407246 DNMT1P26358 1616 aaKnown RBP23.67■■□□□ 1.38
SCP2-204ENST00000407246 ITSN2Q9NZM3 1697 aa23.67■■□□□ 1.38
SCP2-204ENST00000407246 ZNF777Q9ULD5 760 aaPredicted RBP23.67■■□□□ 1.38
SCP2-204ENST00000407246 CAMSAP2Q08AD1 1489 aa23.66■■□□□ 1.38
SCP2-204ENST00000407246 ABCC10Q5T3U5 1492 aa23.64■■□□□ 1.37
SCP2-204ENST00000407246 AKNAQ7Z591 1439 aa23.63■■□□□ 1.37
SCP2-204ENST00000407246 CDC42BPAQ5VT25 1732 aa23.62■■□□□ 1.37
SCP2-204ENST00000407246 TSHZ2Q9NRE2 1034 aa23.6■■□□□ 1.37
SCP2-204ENST00000407246 DDX10Q13206 875 aaKnown RBP23.59■■□□□ 1.37
SCP2-204ENST00000407246 ABCC2Q92887 1545 aa23.57■■□□□ 1.36
SCP2-204ENST00000407246 TRIM52Q96A61 297 aa23.56■■□□□ 1.36
SCP2-204ENST00000407246 ROCK1Q13464 1354 aa23.56■■□□□ 1.36
SCP2-204ENST00000407246 DENND4BO75064 1496 aaPredicted RBP23.54■■□□□ 1.36
SCP2-204ENST00000407246 PPP1R15AO75807 674 aaPredicted RBP23.51■■□□□ 1.35
SCP2-204ENST00000407246 CROCC2H7BZ55 1655 aa23.5■■□□□ 1.35
SCP2-204ENST00000407246 HIRIP3Q9BW71 556 aaPredicted RBP23.49■■□□□ 1.35
SCP2-204ENST00000407246 BCANQ96GW7 911 aa23.48■■□□□ 1.35
SCP2-204ENST00000407246 NCOA1Q15788 1441 aa23.47■■□□□ 1.35
SCP2-204ENST00000407246 CDC42BPBQ9Y5S2 1711 aa23.46■■□□□ 1.35
SCP2-204ENST00000407246 TTC37Q6PGP7 1564 aa23.46■■□□□ 1.35
SCP2-204ENST00000407246 ADGBQ8N7X0 1667 aa23.46■■□□□ 1.35
SCP2-204ENST00000407246 MPHOSPH9Q99550 1183 aa23.45■■□□□ 1.35
SCP2-204ENST00000407246 ZCCHC11Q5TAX3 1644 aaKnown RBP23.45■■□□□ 1.34
SCP2-204ENST00000407246 HNRNPMP52272 730 aaKnown RBP eCLIP23.44■■□□□ 1.34
SCP2-204ENST00000407246 FOXD1Q16676 465 aa23.44■■□□□ 1.34
SCP2-204ENST00000407246 TIMELESSQ9UNS1 1208 aa23.44■■□□□ 1.34
SCP2-204ENST00000407246 PREX2Q70Z35 1606 aa23.43■■□□□ 1.34
SCP2-204ENST00000407246 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.43■■□□□ 1.34
SCP2-204ENST00000407246 ADGRL2O95490 1459 aa23.42■■□□□ 1.34
SCP2-204ENST00000407246 UHRF1BP1LA0JNW5 1464 aa23.41■■□□□ 1.34
SCP2-204ENST00000407246 FKBP8Q14318 412 aa23.41■■□□□ 1.34
SCP2-204ENST00000407246 SAMD9LQ8IVG5 1584 aa23.41■■□□□ 1.34
SCP2-204ENST00000407246 TONSLQ96HA7 1378 aa23.41■■□□□ 1.34
SCP2-204ENST00000407246 KDM5BQ9UGL1 1544 aa23.39■■□□□ 1.33
SCP2-204ENST00000407246 C9orf84Q5VXU9 1444 aa23.38■■□□□ 1.33
SCP2-204ENST00000407246 ANKRD30AQ9BXX3 1397 aa23.38■■□□□ 1.33
SCP2-204ENST00000407246 MBD5Q9P267 1494 aa23.38■■□□□ 1.33
SCP2-204ENST00000407246 ARHGAP5Q13017 1502 aa23.36■■□□□ 1.33
SCP2-204ENST00000407246 SHANK2Q9UPX8 1470 aa23.35■■□□□ 1.33
SCP2-204ENST00000407246 TSPY4P0CV99 314 aa23.33■■□□□ 1.33
SCP2-204ENST00000407246 TSPY10P0CW01 314 aa23.33■■□□□ 1.33
SCP2-204ENST00000407246 ARHGEF5Q12774 1597 aa23.33■■□□□ 1.33
SCP2-204ENST00000407246 CCER2I3L3R5 266 aa23.33■■□□□ 1.33
SCP2-204ENST00000407246 SLC4A1APQ9BWU0 796 aaKnown RBP23.33■■□□□ 1.33
SCP2-204ENST00000407246 MYO5CQ9NQX4 1742 aa23.32■■□□□ 1.32
SCP2-204ENST00000407246 OSCARQ8IYS5 282 aa23.32■■□□□ 1.32
SCP2-204ENST00000407246 PZPP20742 1482 aa23.32■■□□□ 1.32
SCP2-204ENST00000407246 ANKRD50Q9ULJ7 1429 aa23.31■■□□□ 1.32
SCP2-204ENST00000407246 SYCP2Q9BX26 1530 aa23.31■■□□□ 1.32
SCP2-204ENST00000407246 ANP32CO43423 234 aa23.31■■□□□ 1.32
SCP2-204ENST00000407246 CCDC141Q6ZP82 1450 aa23.3■■□□□ 1.32
SCP2-204ENST00000407246 ANKRD30BQ9BXX2 1392 aa23.28■■□□□ 1.32
SCP2-204ENST00000407246 KIF15Q9NS87 1388 aa23.26■■□□□ 1.31
SCP2-204ENST00000407246 ANP32EQ9BTT0 268 aa23.25■■□□□ 1.31
SCP2-204ENST00000407246 PLCH2O75038 1416 aa23.24■■□□□ 1.31
SCP2-204ENST00000407246 ARHGEF12Q9NZN5 1544 aa23.23■■□□□ 1.31
SCP2-204ENST00000407246 NEFLP07196 543 aa23.22■■□□□ 1.31
SCP2-204ENST00000407246 RSPH4AQ5TD94 716 aa23.2■■□□□ 1.3
SCP2-204ENST00000407246 L3MBTL2Q969R5 705 aa23.2■■□□□ 1.3
SCP2-204ENST00000407246 RPRD2Q5VT52 1461 aaKnown RBP23.19■■□□□ 1.3
SCP2-204ENST00000407246 WDR7Q9Y4E6 1490 aa23.19■■□□□ 1.3
SCP2-204ENST00000407246 PKD2Q13563 968 aa23.18■■□□□ 1.3
SCP2-204ENST00000407246 NUP155O75694 1391 aa23.18■■□□□ 1.3
SCP2-204ENST00000407246 KIAA1107Q9UPP5 1409 aa23.17■■□□□ 1.3
SCP2-204ENST00000407246 EFCAB2Q5VUJ9 269 aa23.17■■□□□ 1.3
SCP2-204ENST00000407246 PLEKHH2Q8IVE3 1493 aa23.16■■□□□ 1.3
SCP2-204ENST00000407246 MAST1Q9Y2H9 1570 aa23.15■■□□□ 1.3
SCP2-204ENST00000407246 ABCC1P33527 1531 aa23.13■■□□□ 1.29
SCP2-204ENST00000407246 ASXL2Q76L83 1435 aa23.12■■□□□ 1.29
SCP2-204ENST00000407246 TRAPPC8Q9Y2L5 1435 aa23.12■■□□□ 1.29
SCP2-204ENST00000407246 TEX14Q8IWB6 1497 aa23.12■■□□□ 1.29
SCP2-204ENST00000407246 KDM5DQ9BY66 1539 aa23.11■■□□□ 1.29
SCP2-204ENST00000407246 RBM19Q9Y4C8 960 aaKnown RBP23.1■■□□□ 1.29
SCP2-204ENST00000407246 PLXNC1O60486 1568 aa23.07■■□□□ 1.28
SCP2-204ENST00000407246 NBPF8Q3BBV2 869 aa23.06■■□□□ 1.28
SCP2-204ENST00000407246 ABCA9Q8IUA7 1624 aa23.06■■□□□ 1.28
SCP2-204ENST00000407246 AFAP1Q8N556 730 aa23.05■■□□□ 1.28
SCP2-204ENST00000407246 ARAP3Q8WWN8 1544 aa23.04■■□□□ 1.28
SCP2-204ENST00000407246 FAM135AQ9P2D6 1515 aa23.03■■□□□ 1.28
SCP2-204ENST00000407246 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.03■■□□□ 1.282e-6■■■□□ 14.9
SCP2-204ENST00000407246 FANCAO15360 1455 aa23.02■■□□□ 1.28
SCP2-204ENST00000407246 WASHC2AQ641Q2 1341 aa23.02■■□□□ 1.28
SCP2-204ENST00000407246 HNRNPUQ00839 825 aaKnown RBP eCLIP23.02■■□□□ 1.28
SCP2-204ENST00000407246 NPM1P06748 294 aaKnown RBP eCLIP23.01■■□□□ 1.27
SCP2-204ENST00000407246 HSPA5P11021 654 aaKnown RBP23■■□□□ 1.27
SCP2-204ENST00000407246 DUOX2Q9NRD8 1548 aa23■■□□□ 1.27
SCP2-204ENST00000407246 UNC13BO14795 1591 aa23■■□□□ 1.27
SCP2-204ENST00000407246 SPAG9O60271 1321 aaKnown RBP22.98■■□□□ 1.27
SCP2-204ENST00000407246 IRX6P78412 446 aaPredicted RBP22.96■■□□□ 1.27
SCP2-204ENST00000407246 ZFYVE16Q7Z3T8 1539 aa22.95■■□□□ 1.27
SCP2-204ENST00000407246 ERBINQ96RT1 1412 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms