RNA–Protein interactions for RNA: ENST00000406477.7

PARVB-204, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-204ENST00000406477 ZNF316A6NFI3 1004 aaPredicted RBP23.63■■□□□ 1.37
PARVB-204ENST00000406477 TIMELESSQ9UNS1 1208 aa23.62■■□□□ 1.37
PARVB-204ENST00000406477 CHIC2Q9UKJ5 165 aa23.61■■□□□ 1.37
PARVB-204ENST00000406477 DNAJC5Q9H3Z4 198 aa23.6■■□□□ 1.37
PARVB-204ENST00000406477 RRP7BPQ9NSQ0 103 aa23.6■■□□□ 1.37
PARVB-204ENST00000406477 CDC42BPAQ5VT25 1732 aa23.58■■□□□ 1.37
PARVB-204ENST00000406477 ZNF644Q9H582 1327 aaPredicted RBP23.58■■□□□ 1.37
PARVB-204ENST00000406477 OSCARQ8IYS5 282 aa23.54■■□□□ 1.36
PARVB-204ENST00000406477 KDM5BQ9UGL1 1544 aa23.54■■□□□ 1.36
PARVB-204ENST00000406477 ZNF777Q9ULD5 760 aaPredicted RBP23.53■■□□□ 1.36
PARVB-204ENST00000406477 ADGRL2O95490 1459 aa23.52■■□□□ 1.36
PARVB-204ENST00000406477 ADGBQ8N7X0 1667 aa23.5■■□□□ 1.35
PARVB-204ENST00000406477 RSPH4AQ5TD94 716 aa23.5■■□□□ 1.35
PARVB-204ENST00000406477 SHANK2Q9UPX8 1470 aa23.5■■□□□ 1.35
PARVB-204ENST00000406477 CROCC2H7BZ55 1655 aa23.49■■□□□ 1.35
PARVB-204ENST00000406477 PREX2Q70Z35 1606 aa23.49■■□□□ 1.35
PARVB-204ENST00000406477 ZCCHC11Q5TAX3 1644 aaKnown RBP23.48■■□□□ 1.35
PARVB-204ENST00000406477 ANKRD30AQ9BXX3 1397 aa23.48■■□□□ 1.35
PARVB-204ENST00000406477 ARHGEF5Q12774 1597 aa23.46■■□□□ 1.35
PARVB-204ENST00000406477 NCOA1Q15788 1441 aa23.46■■□□□ 1.35
PARVB-204ENST00000406477 TRIM52Q96A61 297 aa23.46■■□□□ 1.35
PARVB-204ENST00000406477 DIEXFQ68CQ4 756 aaKnown RBP23.45■■□□□ 1.34
PARVB-204ENST00000406477 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.44■■□□□ 1.341e-6■■■■■ 30.2
PARVB-204ENST00000406477 TSPY4P0CV99 314 aa23.44■■□□□ 1.34
PARVB-204ENST00000406477 TSPY10P0CW01 314 aa23.44■■□□□ 1.34
PARVB-204ENST00000406477 SIN3AQ96ST3 1273 aa23.43■■□□□ 1.34
PARVB-204ENST00000406477 PLEKHH2Q8IVE3 1493 aa23.42■■□□□ 1.34
PARVB-204ENST00000406477 NEUROD1Q13562 356 aa23.42■■□□□ 1.34
PARVB-204ENST00000406477 CDC42BPBQ9Y5S2 1711 aa23.41■■□□□ 1.34
PARVB-204ENST00000406477 KDM6BO15054 1643 aa23.41■■□□□ 1.34
PARVB-204ENST00000406477 C9orf84Q5VXU9 1444 aa23.4■■□□□ 1.34
PARVB-204ENST00000406477 MYO5CQ9NQX4 1742 aa23.39■■□□□ 1.33
PARVB-204ENST00000406477 TTC37Q6PGP7 1564 aa23.39■■□□□ 1.33
PARVB-204ENST00000406477 ARHGAP5Q13017 1502 aa23.38■■□□□ 1.33
PARVB-204ENST00000406477 MPHOSPH9Q99550 1183 aa23.38■■□□□ 1.33
PARVB-204ENST00000406477 CCDC141Q6ZP82 1450 aa23.38■■□□□ 1.33
PARVB-204ENST00000406477 MBD5Q9P267 1494 aa23.38■■□□□ 1.33
PARVB-204ENST00000406477 SAMD9LQ8IVG5 1584 aa23.38■■□□□ 1.33
PARVB-204ENST00000406477 KIAA1107Q9UPP5 1409 aa23.37■■□□□ 1.33
PARVB-204ENST00000406477 TONSLQ96HA7 1378 aa23.36■■□□□ 1.33
PARVB-204ENST00000406477 PLCH2O75038 1416 aa23.35■■□□□ 1.33
PARVB-204ENST00000406477 KCNH8Q96L42 1107 aa23.35■■□□□ 1.33
PARVB-204ENST00000406477 HNRNPMP52272 730 aaKnown RBP eCLIP23.33■■□□□ 1.33
PARVB-204ENST00000406477 ANKRD50Q9ULJ7 1429 aa23.32■■□□□ 1.32
PARVB-204ENST00000406477 ARAP3Q8WWN8 1544 aa23.32■■□□□ 1.32
PARVB-204ENST00000406477 PPP1R15AO75807 674 aaPredicted RBP23.31■■□□□ 1.32
PARVB-204ENST00000406477 EFCAB2Q5VUJ9 269 aa23.31■■□□□ 1.32
PARVB-204ENST00000406477 WDR7Q9Y4E6 1490 aa23.31■■□□□ 1.32
PARVB-204ENST00000406477 MAST1Q9Y2H9 1570 aa23.3■■□□□ 1.32
PARVB-204ENST00000406477 DENND4BO75064 1496 aaPredicted RBP23.29■■□□□ 1.32
PARVB-204ENST00000406477 SYCP2Q9BX26 1530 aa23.27■■□□□ 1.32
PARVB-204ENST00000406477 NPM1P06748 294 aaKnown RBP eCLIP23.27■■□□□ 1.32
PARVB-204ENST00000406477 SLC4A1APQ9BWU0 796 aaKnown RBP23.27■■□□□ 1.32
PARVB-204ENST00000406477 KIF15Q9NS87 1388 aa23.26■■□□□ 1.31
PARVB-204ENST00000406477 PZPP20742 1482 aa23.22■■□□□ 1.31
PARVB-204ENST00000406477 ANKRD30BQ9BXX2 1392 aa23.22■■□□□ 1.31
PARVB-204ENST00000406477 KDM5DQ9BY66 1539 aa23.2■■□□□ 1.3
PARVB-204ENST00000406477 ASXL2Q76L83 1435 aa23.19■■□□□ 1.3
PARVB-204ENST00000406477 ABCA9Q8IUA7 1624 aa23.19■■□□□ 1.3
PARVB-204ENST00000406477 ABCC1P33527 1531 aa23.19■■□□□ 1.3
PARVB-204ENST00000406477 PLXNC1O60486 1568 aa23.18■■□□□ 1.3
PARVB-204ENST00000406477 RPRD2Q5VT52 1461 aaKnown RBP23.16■■□□□ 1.3
PARVB-204ENST00000406477 NUP155O75694 1391 aa23.15■■□□□ 1.3
PARVB-204ENST00000406477 ARHGEF12Q9NZN5 1544 aa23.13■■□□□ 1.29
PARVB-204ENST00000406477 DUOX2Q9NRD8 1548 aa23.11■■□□□ 1.29
PARVB-204ENST00000406477 RTEL1-TNFRSF6BF6WH68 1400 aa23.11■■□□□ 1.29
PARVB-204ENST00000406477 FOXD1Q16676 465 aa23.1■■□□□ 1.29
PARVB-204ENST00000406477 PKD2Q13563 968 aa23.1■■□□□ 1.29
PARVB-204ENST00000406477 FANCAO15360 1455 aa23.09■■□□□ 1.29
PARVB-204ENST00000406477 ERBINQ96RT1 1412 aa23.08■■□□□ 1.29
PARVB-204ENST00000406477 TRAPPC8Q9Y2L5 1435 aa23.06■■□□□ 1.28
PARVB-204ENST00000406477 SPAG9O60271 1321 aaKnown RBP23.05■■□□□ 1.28
PARVB-204ENST00000406477 UNC13BO14795 1591 aa23.05■■□□□ 1.28
PARVB-204ENST00000406477 L3MBTL2Q969R5 705 aa23.03■■□□□ 1.28
PARVB-204ENST00000406477 CFAP74Q9C0B2 1584 aa23.01■■□□□ 1.27
PARVB-204ENST00000406477 ADGRL1O94910 1474 aa23.01■■□□□ 1.27
PARVB-204ENST00000406477 TEX14Q8IWB6 1497 aa23.01■■□□□ 1.27
PARVB-204ENST00000406477 FAM135AQ9P2D6 1515 aa23■■□□□ 1.27
PARVB-204ENST00000406477 SCAPERQ9BY12 1400 aa22.98■■□□□ 1.27
PARVB-204ENST00000406477 MIER1Q8N108 512 aa22.97■■□□□ 1.27
PARVB-204ENST00000406477 ZFYVE16Q7Z3T8 1539 aa22.97■■□□□ 1.27
PARVB-204ENST00000406477 CD109Q6YHK3 1445 aa22.97■■□□□ 1.27
PARVB-204ENST00000406477 MAGI2Q86UL8 1455 aa22.97■■□□□ 1.27
PARVB-204ENST00000406477 IQGAP3Q86VI3 1631 aa22.95■■□□□ 1.27
PARVB-204ENST00000406477 AFAP1Q8N556 730 aa22.95■■□□□ 1.26
PARVB-204ENST00000406477 ATP7AQ04656 1500 aa22.93■■□□□ 1.26
PARVB-204ENST00000406477 INO80Q9ULG1 1556 aaPredicted RBP22.93■■□□□ 1.26
PARVB-204ENST00000406477 ZNF518AQ6AHZ1 1483 aa22.9■■□□□ 1.26
PARVB-204ENST00000406477 EIF4G2P78344 907 aaKnown RBP eCLIP22.89■■□□□ 1.261e-6■■■■■ 32.5
PARVB-204ENST00000406477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.89■■□□□ 1.25
PARVB-204ENST00000406477 RIMBP3CA6NJZ7 1639 aa22.89■■□□□ 1.25
PARVB-204ENST00000406477 RIMBP3BA6NNM3 1639 aa22.89■■□□□ 1.25
PARVB-204ENST00000406477 RIMBP3Q9UFD9 1639 aa22.89■■□□□ 1.25
PARVB-204ENST00000406477 NEO1Q92859 1461 aa22.88■■□□□ 1.25
PARVB-204ENST00000406477 CYB5RLQ6IPT4 315 aa22.85■■□□□ 1.25
PARVB-204ENST00000406477 MYT1LQ9UL68 1186 aa22.85■■□□□ 1.25
PARVB-204ENST00000406477 DHX29Q7Z478 1369 aaKnown RBP22.85■■□□□ 1.25
PARVB-204ENST00000406477 EIF2AK4Q9P2K8 1649 aaKnown RBP22.85■■□□□ 1.25
PARVB-204ENST00000406477 CCDC144AA2RUR9 1427 aa22.84■■□□□ 1.25
PARVB-204ENST00000406477 ATP10AO60312 1499 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms