RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 RICTORQ6R327 1708 aa25.17■■□□□ 1.62
GDPD3-202ENST00000406256 SUPT6HQ7KZ85 1726 aaKnown RBP25.17■■□□□ 1.62
GDPD3-202ENST00000406256 GPATCH8Q9UKJ3 1502 aaKnown RBP25.16■■□□□ 1.62
GDPD3-202ENST00000406256 ARHGAP5Q13017 1502 aa25.15■■□□□ 1.62
GDPD3-202ENST00000406256 KANK4Q5T7N3 995 aaPredicted RBP25.14■■□□□ 1.61
GDPD3-202ENST00000406256 NCOA2Q15596 1464 aa25.13■■□□□ 1.61
GDPD3-202ENST00000406256 ADGRL1O94910 1474 aa25.1■■□□□ 1.61
GDPD3-202ENST00000406256 SAMD9LQ8IVG5 1584 aa25.09■■□□□ 1.61
GDPD3-202ENST00000406256 ITSN2Q9NZM3 1697 aa25.09■■□□□ 1.61
GDPD3-202ENST00000406256 ABCC1P33527 1531 aa25.08■■□□□ 1.61
GDPD3-202ENST00000406256 EFCAB2Q5VUJ9 269 aa25.06■■□□□ 1.6
GDPD3-202ENST00000406256 ARHGEF12Q9NZN5 1544 aa25.06■■□□□ 1.6
GDPD3-202ENST00000406256 DENND4BO75064 1496 aaPredicted RBP25.06■■□□□ 1.6
GDPD3-202ENST00000406256 CCNB3Q8WWL7 1395 aa25.05■■□□□ 1.6
GDPD3-202ENST00000406256 RAPGEF3O95398 923 aa25.05■■□□□ 1.6
GDPD3-202ENST00000406256 ZMYM4Q5VZL5 1548 aa25.04■■□□□ 1.6
GDPD3-202ENST00000406256 SCAPERQ9BY12 1400 aa25.04■■□□□ 1.6
GDPD3-202ENST00000406256 POGZQ7Z3K3 1410 aa25.03■■□□□ 1.6
GDPD3-202ENST00000406256 KDM5CP41229 1560 aa25■■□□□ 1.59
GDPD3-202ENST00000406256 SYCP2Q9BX26 1530 aa24.97■■□□□ 1.59
GDPD3-202ENST00000406256 TRAPPC8Q9Y2L5 1435 aa24.96■■□□□ 1.59
GDPD3-202ENST00000406256 ARHGEF40Q8TER5 1519 aa24.95■■□□□ 1.58
GDPD3-202ENST00000406256 ZNF518AQ6AHZ1 1483 aa24.94■■□□□ 1.58
GDPD3-202ENST00000406256 CFDP1Q9UEE9 299 aaPredicted RBP24.94■■□□□ 1.58
GDPD3-202ENST00000406256 APLP2Q06481 763 aa24.93■■□□□ 1.58
GDPD3-202ENST00000406256 KIAA1107Q9UPP5 1409 aa24.92■■□□□ 1.58
GDPD3-202ENST00000406256 MYOM3Q5VTT5 1437 aa24.91■■□□□ 1.58
GDPD3-202ENST00000406256 ZNF644Q9H582 1327 aaPredicted RBP24.91■■□□□ 1.58
GDPD3-202ENST00000406256 SIGLEC1Q9BZZ2 1709 aa24.91■■□□□ 1.58
GDPD3-202ENST00000406256 MBD5Q9P267 1494 aa24.9■■□□□ 1.58
GDPD3-202ENST00000406256 YEATS2Q9ULM3 1422 aa24.9■■□□□ 1.58
GDPD3-202ENST00000406256 CAMSAP2Q08AD1 1489 aa24.9■■□□□ 1.58
GDPD3-202ENST00000406256 PLEKHH2Q8IVE3 1493 aa24.9■■□□□ 1.58
GDPD3-202ENST00000406256 HECW2Q9P2P5 1572 aa24.89■■□□□ 1.58
GDPD3-202ENST00000406256 ZNF777Q9ULD5 760 aaPredicted RBP24.89■■□□□ 1.57
GDPD3-202ENST00000406256 MAGI2Q86UL8 1455 aa24.89■■□□□ 1.57
GDPD3-202ENST00000406256 ZFYVE16Q7Z3T8 1539 aa24.89■■□□□ 1.57
GDPD3-202ENST00000406256 AFAP1Q8N556 730 aa24.88■■□□□ 1.57
GDPD3-202ENST00000406256 KIDINS220Q9ULH0 1771 aa24.88■■□□□ 1.57
GDPD3-202ENST00000406256 MIA2Q96PC5 1412 aa24.86■■□□□ 1.57
GDPD3-202ENST00000406256 ABCA6Q8N139 1617 aa24.85■■□□□ 1.57
GDPD3-202ENST00000406256 MLH3Q9UHC1 1453 aa24.85■■□□□ 1.57
GDPD3-202ENST00000406256 INO80Q9ULG1 1556 aaPredicted RBP24.84■■□□□ 1.57
GDPD3-202ENST00000406256 HNRNPMP52272 730 aaKnown RBP eCLIP24.83■■□□□ 1.57
GDPD3-202ENST00000406256 DIP2CQ9Y2E4 1556 aa24.83■■□□□ 1.57
GDPD3-202ENST00000406256 ARHGEF5Q12774 1597 aa24.82■■□□□ 1.56
GDPD3-202ENST00000406256 PTPN23Q9H3S7 1636 aa24.81■■□□□ 1.56
GDPD3-202ENST00000406256 FGD6Q6ZV73 1430 aa24.8■■□□□ 1.56
GDPD3-202ENST00000406256 TCOF1Q13428 1488 aaKnown RBP24.78■■□□□ 1.56
GDPD3-202ENST00000406256 ATP7AQ04656 1500 aa24.77■■□□□ 1.56
GDPD3-202ENST00000406256 CCDC141Q6ZP82 1450 aa24.76■■□□□ 1.55
GDPD3-202ENST00000406256 REREQ9P2R6 1566 aa24.76■■□□□ 1.55
GDPD3-202ENST00000406256 ATP10AO60312 1499 aa24.74■■□□□ 1.55
GDPD3-202ENST00000406256 BCORL1Q5H9F3 1711 aa24.73■■□□□ 1.55
GDPD3-202ENST00000406256 CROCC2H7BZ55 1655 aa24.73■■□□□ 1.55
GDPD3-202ENST00000406256 KDM4FA0A1W2PPD8 638 aa24.72■■□□□ 1.55
GDPD3-202ENST00000406256 C9orf84Q5VXU9 1444 aa24.72■■□□□ 1.55
GDPD3-202ENST00000406256 PPARGC1BQ86YN6 1023 aaKnown RBP24.71■■□□□ 1.55
GDPD3-202ENST00000406256 ADAMTSL3P82987 1691 aa24.7■■□□□ 1.55
GDPD3-202ENST00000406256 ADGBQ8N7X0 1667 aa24.7■■□□□ 1.55
GDPD3-202ENST00000406256 MAST1Q9Y2H9 1570 aa24.7■■□□□ 1.55
GDPD3-202ENST00000406256 SPAG9O60271 1321 aaKnown RBP24.7■■□□□ 1.54
GDPD3-202ENST00000406256 DNMT1P26358 1616 aaKnown RBP24.69■■□□□ 1.54
GDPD3-202ENST00000406256 RTEL1-TNFRSF6BF6WH68 1400 aa24.68■■□□□ 1.54
GDPD3-202ENST00000406256 PLXNC1O60486 1568 aa24.67■■□□□ 1.54
GDPD3-202ENST00000406256 ABCC5O15440 1437 aa24.64■■□□□ 1.54
GDPD3-202ENST00000406256 AGLP35573 1532 aa24.64■■□□□ 1.53
GDPD3-202ENST00000406256 RSPH4AQ5TD94 716 aa24.64■■□□□ 1.53
GDPD3-202ENST00000406256 DAPK1P53355 1430 aa24.62■■□□□ 1.53
GDPD3-202ENST00000406256 SHANK2Q9UPX8 1470 aa24.62■■□□□ 1.53
GDPD3-202ENST00000406256 MADDQ8WXG6 1647 aa24.61■■□□□ 1.53
GDPD3-202ENST00000406256 A2MP01023 1474 aa24.58■■□□□ 1.53
GDPD3-202ENST00000406256 MYT1LQ9UL68 1186 aa24.58■■□□□ 1.53
GDPD3-202ENST00000406256 FER1L4A9Z1Z3 1794 aa24.55■■□□□ 1.52
GDPD3-202ENST00000406256 RRBP1Q9P2E9 1410 aaKnown RBP24.55■■□□□ 1.52
GDPD3-202ENST00000406256 ARID4BQ4LE39 1312 aaPredicted RBP24.55■■□□□ 1.52
GDPD3-202ENST00000406256 RIMS1Q86UR5 1692 aaKnown RBP24.53■■□□□ 1.52
GDPD3-202ENST00000406256 PTPRKQ15262 1439 aa24.52■■□□□ 1.52
GDPD3-202ENST00000406256 TSPY4P0CV99 314 aa24.52■■□□□ 1.52
GDPD3-202ENST00000406256 TSPY10P0CW01 314 aa24.52■■□□□ 1.52
GDPD3-202ENST00000406256 DHX29Q7Z478 1369 aaKnown RBP24.51■■□□□ 1.51
GDPD3-202ENST00000406256 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.51■■□□□ 1.51
GDPD3-202ENST00000406256 ADGRL2O95490 1459 aa24.5■■□□□ 1.51
GDPD3-202ENST00000406256 FAM50AQ14320 339 aaKnown RBP24.49■■□□□ 1.51
GDPD3-202ENST00000406256 PTPRMP28827 1452 aa24.46■■□□□ 1.51
GDPD3-202ENST00000406256 EIF2AK4Q9P2K8 1649 aaKnown RBP24.45■■□□□ 1.51
GDPD3-202ENST00000406256 MLECQ14165 292 aa24.45■■□□□ 1.5
GDPD3-202ENST00000406256 DUOX2Q9NRD8 1548 aa24.44■■□□□ 1.5
GDPD3-202ENST00000406256 NCOA1Q15788 1441 aa24.44■■□□□ 1.5
GDPD3-202ENST00000406256 AEBP2Q6ZN18 517 aaPredicted RBP24.43■■□□□ 1.5
GDPD3-202ENST00000406256 RNF17Q9BXT8 1623 aaKnown RBP24.43■■□□□ 1.5
GDPD3-202ENST00000406256 KIF15Q9NS87 1388 aa24.42■■□□□ 1.5
GDPD3-202ENST00000406256 MROH1Q8NDA8 1641 aa24.42■■□□□ 1.5
GDPD3-202ENST00000406256 CHIC2Q9UKJ5 165 aa24.4■■□□□ 1.5
GDPD3-202ENST00000406256 MROH2AA6NES4 1674 aa24.38■■□□□ 1.49
GDPD3-202ENST00000406256 CLTCQ00610 1675 aaKnown RBP24.38■■□□□ 1.49
GDPD3-202ENST00000406256 ANKRD30AQ9BXX3 1397 aa24.38■■□□□ 1.49
GDPD3-202ENST00000406256 C3P01024 1663 aa24.37■■□□□ 1.49
GDPD3-202ENST00000406256 ERBINQ96RT1 1412 aa24.37■■□□□ 1.49
GDPD3-202ENST00000406256 DEPDC5O75140 1603 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms