RNA–Protein interactions for RNA: ENST00000401000.8

RPRD2-203, Transcript of regulation of nuclear pre-mRNA domain containing 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RPRD2, Length 7,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2-203ENST00000401000 KIAA1211Q6ZU35 1233 aa12.64□□□□□ -0.39
RPRD2-203ENST00000401000 DCAF11Q8TEB1 546 aa12.64□□□□□ -0.39
RPRD2-203ENST00000401000 GOLGA6L3A6NEY3 463 aa12.63□□□□□ -0.39
RPRD2-203ENST00000401000 MORC1Q86VD1 984 aa12.63□□□□□ -0.39
RPRD2-203ENST00000401000 EEA1Q15075 1411 aa12.61□□□□□ -0.39
RPRD2-203ENST00000401000 CCER2I3L3R5 266 aa12.61□□□□□ -0.39
RPRD2-203ENST00000401000 ITPRIPQ8IWB1 547 aa12.61□□□□□ -0.39
RPRD2-203ENST00000401000 SYAP1Q96A49 352 aaPredicted RBP12.61□□□□□ -0.39
RPRD2-203ENST00000401000 SRPK2P78362 688 aaKnown RBP12.6□□□□□ -0.39
RPRD2-203ENST00000401000 HSP90B1P14625 803 aaKnown RBP12.6□□□□□ -0.39
RPRD2-203ENST00000401000 MFAP1P55081 439 aaKnown RBP12.6□□□□□ -0.39
RPRD2-203ENST00000401000 RTF1Q92541 710 aaKnown RBP12.6□□□□□ -0.39
RPRD2-203ENST00000401000 RCAN3Q9UKA8 241 aa12.59□□□□□ -0.39
RPRD2-203ENST00000401000 TPM4P67936 248 aa12.59□□□□□ -0.39
RPRD2-203ENST00000401000 FOXD4L1Q9NU39 408 aa12.59□□□□□ -0.39
RPRD2-203ENST00000401000 SAFB2Q14151 953 aaKnown RBP eCLIP12.59□□□□□ -0.39
RPRD2-203ENST00000401000 CEP164Q9UPV0 1460 aa12.59□□□□□ -0.39
RPRD2-203ENST00000401000 GOLGA6L1Q8N7Z2 621 aa12.58□□□□□ -0.39
RPRD2-203ENST00000401000 HSPA5P11021 654 aaKnown RBP12.58□□□□□ -0.4
RPRD2-203ENST00000401000 KTN1Q86UP2 1357 aaKnown RBP12.58□□□□□ -0.4
RPRD2-203ENST00000401000 IPO8O15397 1037 aaKnown RBP12.57□□□□□ -0.4
RPRD2-203ENST00000401000 TCERG1O14776 1098 aaKnown RBP12.57□□□□□ -0.4
RPRD2-203ENST00000401000 A0A0U1RQG5 324 aaPredicted RBP12.57□□□□□ -0.4
RPRD2-203ENST00000401000 RWDD1Q9H446 243 aaPredicted RBP12.57□□□□□ -0.4
RPRD2-203ENST00000401000 HTATSF1O43719 755 aaKnown RBP12.56□□□□□ -0.4
RPRD2-203ENST00000401000 PDE4CQ08493 712 aa12.56□□□□□ -0.4
RPRD2-203ENST00000401000 TNIKQ9UKE5 1360 aa12.56□□□□□ -0.4
RPRD2-203ENST00000401000 IPO9Q96P70 1041 aaKnown RBP12.56□□□□□ -0.4
RPRD2-203ENST00000401000 TSHZ2Q9NRE2 1034 aa12.55□□□□□ -0.4
RPRD2-203ENST00000401000 CCNB3Q8WWL7 1395 aa12.55□□□□□ -0.4
RPRD2-203ENST00000401000 NOL8Q76FK4 1167 aaKnown RBP12.54□□□□□ -0.4
RPRD2-203ENST00000401000 CREBRFQ8IUR6 639 aa12.54□□□□□ -0.4
RPRD2-203ENST00000401000 TRIM6-TRIM34B2RNG4 842 aa12.54□□□□□ -0.4
RPRD2-203ENST00000401000 PMFBP1Q8TBY8 1022 aa12.54□□□□□ -0.4
RPRD2-203ENST00000401000 EIF4G1Q04637 1599 aaKnown RBP12.54□□□□□ -0.4
RPRD2-203ENST00000401000 CALD1Q05682 793 aaKnown RBP12.53□□□□□ -0.4
RPRD2-203ENST00000401000 KIF27Q86VH2 1401 aa12.53□□□□□ -0.4
RPRD2-203ENST00000401000 KANK1Q14678 1352 aa12.53□□□□□ -0.4
RPRD2-203ENST00000401000 WRNQ14191 1432 aaPredicted RBP eCLIP12.53□□□□□ -0.4
RPRD2-203ENST00000401000 FOXD4L5Q5VV16 416 aaPredicted RBP12.52□□□□□ -0.41
RPRD2-203ENST00000401000 FOXD4L4Q8WXT5 416 aaPredicted RBP12.52□□□□□ -0.41
RPRD2-203ENST00000401000 HSP90AA2PQ14568 343 aaPredicted RBP12.51□□□□□ -0.41
RPRD2-203ENST00000401000 PRM3Q9NNZ6 103 aa12.51□□□□□ -0.41
RPRD2-203ENST00000401000 STK26Q9P289 416 aa12.51□□□□□ -0.41
RPRD2-203ENST00000401000 CSPP1Q1MSJ5 1256 aa12.51□□□□□ -0.41
RPRD2-203ENST00000401000 FOXD1Q16676 465 aa12.5□□□□□ -0.41
RPRD2-203ENST00000401000 SETD5Q9C0A6 1442 aa12.5□□□□□ -0.41
RPRD2-203ENST00000401000 ROCK2O75116 1388 aaKnown RBP12.49□□□□□ -0.41
RPRD2-203ENST00000401000 U2AF1L5P0DN76 240 aaPredicted RBP12.49□□□□□ -0.41
RPRD2-203ENST00000401000 U2AF1Q01081 240 aaKnown RBP eCLIP12.49□□□□□ -0.41
RPRD2-203ENST00000401000 GPATCH3Q96I76 525 aa12.49□□□□□ -0.41
RPRD2-203ENST00000401000 ZNF330Q9Y3S2 320 aaPredicted RBP12.49□□□□□ -0.41
RPRD2-203ENST00000401000 PHF14O94880 888 aa12.48□□□□□ -0.41
RPRD2-203ENST00000401000 CHMP3Q9Y3E7 222 aa12.48□□□□□ -0.41
RPRD2-203ENST00000401000 HDGFL2Q7Z4V5 671 aaPredicted RBP12.48□□□□□ -0.41
RPRD2-203ENST00000401000 SMC4Q9NTJ3 1288 aa12.48□□□□□ -0.41
RPRD2-203ENST00000401000 GORABQ5T7V8 394 aa12.47□□□□□ -0.41
RPRD2-203ENST00000401000 CCDC146Q8IYE0 955 aa12.47□□□□□ -0.41
RPRD2-203ENST00000401000 PAK3O75914 559 aaPredicted RBP12.46□□□□□ -0.41
RPRD2-203ENST00000401000 RASSF8Q8NHQ8 419 aa12.46□□□□□ -0.41
RPRD2-203ENST00000401000 RALBP1Q15311 655 aa12.46□□□□□ -0.41
RPRD2-203ENST00000401000 ARHGAP35Q9NRY4 1499 aa12.46□□□□□ -0.42
RPRD2-203ENST00000401000 SETQ01105 290 aaPredicted RBP12.46□□□□□ -0.42
RPRD2-203ENST00000401000 ANO8Q9HCE9 1232 aaPredicted RBP12.46□□□□□ -0.42
RPRD2-203ENST00000401000 MLECQ14165 292 aa12.45□□□□□ -0.42
RPRD2-203ENST00000401000 FHAD1B1AJZ9 1412 aa12.45□□□□□ -0.42
RPRD2-203ENST00000401000 RSPH6AQ9H0K4 717 aa12.44□□□□□ -0.42
RPRD2-203ENST00000401000 BAZ1BQ9UIG0 1483 aaKnown RBP12.44□□□□□ -0.42
RPRD2-203ENST00000401000 SLC4A10Q6U841 1118 aa12.44□□□□□ -0.42
RPRD2-203ENST00000401000 CCDC34Q96HJ3 373 aa12.44□□□□□ -0.42
RPRD2-203ENST00000401000 DDX11L8A8MPP1 907 aa12.44□□□□□ -0.42
RPRD2-203ENST00000401000 TPM3P06753 285 aa12.44□□□□□ -0.42
RPRD2-203ENST00000401000 CLUAP1Q96AJ1 413 aa12.43□□□□□ -0.42
RPRD2-203ENST00000401000 ST18O60284 1047 aa12.43□□□□□ -0.42
RPRD2-203ENST00000401000 TAF7LQ5H9L4 462 aa12.43□□□□□ -0.42
RPRD2-203ENST00000401000 USP35Q9P2H5 1018 aa12.43□□□□□ -0.42
RPRD2-203ENST00000401000 KIF16BQ96L93 1317 aa12.42□□□□□ -0.42
RPRD2-203ENST00000401000 HDGFP51858 240 aaKnown RBP12.42□□□□□ -0.42
RPRD2-203ENST00000401000 PES1O00541 588 aaKnown RBP12.42□□□□□ -0.42
RPRD2-203ENST00000401000 PKD2Q13563 968 aa12.42□□□□□ -0.42
RPRD2-203ENST00000401000 STK31Q9BXU1 1019 aa12.42□□□□□ -0.42
RPRD2-203ENST00000401000 TIMELESSQ9UNS1 1208 aa12.42□□□□□ -0.42
RPRD2-203ENST00000401000 CCAR2Q8N163 923 aaKnown RBP12.42□□□□□ -0.42
RPRD2-203ENST00000401000 SLC4A3P48751 1232 aa12.41□□□□□ -0.42
RPRD2-203ENST00000401000 VSIG10Q8N0Z9 540 aa12.41□□□□□ -0.42
RPRD2-203ENST00000401000 SPAG9O60271 1321 aaKnown RBP12.41□□□□□ -0.42
RPRD2-203ENST00000401000 FOXD4L6Q3SYB3 417 aaPredicted RBP12.41□□□□□ -0.42
RPRD2-203ENST00000401000 FOXD4L3Q6VB84 417 aaPredicted RBP12.41□□□□□ -0.42
RPRD2-203ENST00000401000 HMMRO75330 724 aa12.41□□□□□ -0.42
RPRD2-203ENST00000401000 RB1CC1Q8TDY2 1594 aa12.4□□□□□ -0.42
RPRD2-203ENST00000401000 SF3A1Q15459 793 aaKnown RBP12.4□□□□□ -0.42
RPRD2-203ENST00000401000 ZNF771Q7L3S4 317 aaPredicted RBP12.4□□□□□ -0.42
RPRD2-203ENST00000401000 CENPJQ9HC77 1338 aaPredicted RBP12.4□□□□□ -0.42
RPRD2-203ENST00000401000 TPD52L1Q16890 204 aaPredicted RBP12.4□□□□□ -0.42
RPRD2-203ENST00000401000 CSB-PGBD3P0DP91 1061 aa12.4□□□□□ -0.43
RPRD2-203ENST00000401000 PATL2C9JE40 543 aaKnown RBP12.39□□□□□ -0.43
RPRD2-203ENST00000401000 H3BQV1 296 aa12.39□□□□□ -0.43
RPRD2-203ENST00000401000 IFFO2Q5TF58 517 aa12.39□□□□□ -0.43
RPRD2-203ENST00000401000 CEP89Q96ST8 783 aa12.39□□□□□ -0.43
RPRD2-203ENST00000401000 GSE1Q14687 1217 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms