RNA–Protein interactions for RNA: ENST00000398645.6

KDM2A-202, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-202ENST00000398645 FOXD1Q16676 465 aa24.8■■□□□ 1.56
KDM2A-202ENST00000398645 DCAF11Q8TEB1 546 aa24.79■■□□□ 1.56
KDM2A-202ENST00000398645 MLECQ14165 292 aa24.78■■□□□ 1.56
KDM2A-202ENST00000398645 A0A0U1RQG5 324 aaPredicted RBP24.77■■□□□ 1.56
KDM2A-202ENST00000398645 FOXD4L6Q3SYB3 417 aaPredicted RBP24.77■■□□□ 1.56
KDM2A-202ENST00000398645 FOXD4L3Q6VB84 417 aaPredicted RBP24.77■■□□□ 1.56
KDM2A-202ENST00000398645 STK26Q9P289 416 aa24.77■■□□□ 1.56
KDM2A-202ENST00000398645 SRPK2P78362 688 aaKnown RBP24.76■■□□□ 1.55
KDM2A-202ENST00000398645 CDCA8Q53HL2 280 aa24.76■■□□□ 1.55
KDM2A-202ENST00000398645 PATL2C9JE40 543 aaKnown RBP24.76■■□□□ 1.55
KDM2A-202ENST00000398645 SLC4A3P48751 1232 aa24.75■■□□□ 1.55
KDM2A-202ENST00000398645 KIAA2012Q0VF49 1180 aa24.75■■□□□ 1.55
KDM2A-202ENST00000398645 BCL11BQ9C0K0 894 aaPredicted RBP24.75■■□□□ 1.55
KDM2A-202ENST00000398645 CFDP1Q9UEE9 299 aaPredicted RBP24.74■■□□□ 1.55
KDM2A-202ENST00000398645 CEP162Q5TB80 1403 aa24.74■■□□□ 1.55
KDM2A-202ENST00000398645 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.73■■□□□ 1.55
KDM2A-202ENST00000398645 CCDC9Q9Y3X0 531 aaKnown RBP24.72■■□□□ 1.55
KDM2A-202ENST00000398645 MORC1Q86VD1 984 aa24.71■■□□□ 1.55
KDM2A-202ENST00000398645 PLEKHD1A6NEE1 506 aa24.7■■□□□ 1.55
KDM2A-202ENST00000398645 CHMP3Q9Y3E7 222 aa24.69■■□□□ 1.54
KDM2A-202ENST00000398645 GOLGA6L3A6NEY3 463 aa24.69■■□□□ 1.54
KDM2A-202ENST00000398645 KIAA1211Q6ZU35 1233 aa24.69■■□□□ 1.54
KDM2A-202ENST00000398645 CCDC146Q8IYE0 955 aa24.69■■□□□ 1.54
KDM2A-202ENST00000398645 TRIM6-TRIM34B2RNG4 842 aa24.68■■□□□ 1.54
KDM2A-202ENST00000398645 GBP4Q96PP9 640 aa24.68■■□□□ 1.54
KDM2A-202ENST00000398645 WWC1Q8IX03 1113 aa24.67■■□□□ 1.54
KDM2A-202ENST00000398645 TSHZ2Q9NRE2 1034 aa24.65■■□□□ 1.54
KDM2A-202ENST00000398645 PAK3O75914 559 aaPredicted RBP24.65■■□□□ 1.54
KDM2A-202ENST00000398645 TIMELESSQ9UNS1 1208 aa24.64■■□□□ 1.54
KDM2A-202ENST00000398645 HSPA5P11021 654 aaKnown RBP24.64■■□□□ 1.54
KDM2A-202ENST00000398645 CLUAP1Q96AJ1 413 aa24.64■■□□□ 1.53
KDM2A-202ENST00000398645 CCDC180Q9P1Z9 1646 aa24.63■■□□□ 1.53
KDM2A-202ENST00000398645 RTF1Q92541 710 aaKnown RBP24.63■■□□□ 1.53
KDM2A-202ENST00000398645 TMF1P82094 1093 aa24.62■■□□□ 1.53
KDM2A-202ENST00000398645 MS4A1P11836 297 aa24.61■■□□□ 1.53
KDM2A-202ENST00000398645 RCAN3Q9UKA8 241 aa24.59■■□□□ 1.53
KDM2A-202ENST00000398645 CHMP4BQ9H444 224 aaKnown RBP24.58■■□□□ 1.53
KDM2A-202ENST00000398645 VSIG10Q8N0Z9 540 aa24.58■■□□□ 1.52
KDM2A-202ENST00000398645 SLC4A10Q6U841 1118 aa24.57■■□□□ 1.52
KDM2A-202ENST00000398645 CCAR2Q8N163 923 aaKnown RBP24.57■■□□□ 1.52
KDM2A-202ENST00000398645 BAZ1BQ9UIG0 1483 aaKnown RBP24.57■■□□□ 1.52
KDM2A-202ENST00000398645 RASSF8Q8NHQ8 419 aa24.56■■□□□ 1.52
KDM2A-202ENST00000398645 PES1O00541 588 aaKnown RBP24.56■■□□□ 1.52
KDM2A-202ENST00000398645 GOLGA6L1Q8N7Z2 621 aa24.56■■□□□ 1.52
KDM2A-202ENST00000398645 RSF1Q96T23 1441 aaPredicted RBP24.54■■□□□ 1.52
KDM2A-202ENST00000398645 NUTM2DQ5VT03 806 aaPredicted RBP24.54■■□□□ 1.52
KDM2A-202ENST00000398645 U2AF1L5P0DN76 240 aaPredicted RBP24.52■■□□□ 1.52
KDM2A-202ENST00000398645 U2AF1Q01081 240 aaKnown RBP eCLIP24.52■■□□□ 1.52
KDM2A-202ENST00000398645 VPS53Q5VIR6 699 aa24.52■■□□□ 1.52
KDM2A-202ENST00000398645 HSP90AA2PQ14568 343 aaPredicted RBP24.52■■□□□ 1.52
KDM2A-202ENST00000398645 GOLGA3Q08378 1498 aa24.5■■□□□ 1.51
KDM2A-202ENST00000398645 ZNF592Q92610 1267 aa24.49■■□□□ 1.51
KDM2A-202ENST00000398645 GORABQ5T7V8 394 aa24.49■■□□□ 1.51
KDM2A-202ENST00000398645 TPM4P67936 248 aa24.49■■□□□ 1.51
KDM2A-202ENST00000398645 IPO9Q96P70 1041 aaKnown RBP24.49■■□□□ 1.51
KDM2A-202ENST00000398645 CALD1Q05682 793 aaKnown RBP24.48■■□□□ 1.51
KDM2A-202ENST00000398645 TOMM22Q9NS69 142 aa24.48■■□□□ 1.51
KDM2A-202ENST00000398645 PTMSP20962 102 aa24.47■■□□□ 1.51
KDM2A-202ENST00000398645 FBXW7Q969H0 707 aa24.46■■□□□ 1.51
KDM2A-202ENST00000398645 CSB-PGBD3P0DP91 1061 aa24.46■■□□□ 1.51
KDM2A-202ENST00000398645 SMC4Q9NTJ3 1288 aa24.46■■□□□ 1.51
KDM2A-202ENST00000398645 PLIN1O60240 522 aa24.45■■□□□ 1.5
KDM2A-202ENST00000398645 SYAP1Q96A49 352 aaPredicted RBP24.45■■□□□ 1.5
KDM2A-202ENST00000398645 RWDD1Q9H446 243 aaPredicted RBP24.45■■□□□ 1.5
KDM2A-202ENST00000398645 RRP7AQ9Y3A4 280 aaKnown RBP24.44■■□□□ 1.5
KDM2A-202ENST00000398645 KTN1Q86UP2 1357 aaKnown RBP24.42■■□□□ 1.5
KDM2A-202ENST00000398645 TAF7LQ5H9L4 462 aa24.41■■□□□ 1.5
KDM2A-202ENST00000398645 ZNF771Q7L3S4 317 aaPredicted RBP24.41■■□□□ 1.5
KDM2A-202ENST00000398645 BCL2L13Q9BXK5 485 aa24.4■■□□□ 1.5
KDM2A-202ENST00000398645 EIF4G1Q04637 1599 aaKnown RBP24.39■■□□□ 1.5
KDM2A-202ENST00000398645 LTV1Q96GA3 475 aaPredicted RBP24.39■■□□□ 1.49
KDM2A-202ENST00000398645 NUTM2FA1L443 756 aa24.38■■□□□ 1.49
KDM2A-202ENST00000398645 IPO8O15397 1037 aaKnown RBP24.37■■□□□ 1.49
KDM2A-202ENST00000398645 RILPL2Q969X0 211 aa24.37■■□□□ 1.49
KDM2A-202ENST00000398645 FOSBP53539 338 aa24.37■■□□□ 1.49
KDM2A-202ENST00000398645 TCERG1O14776 1098 aaKnown RBP24.35■■□□□ 1.49
KDM2A-202ENST00000398645 GGT6Q6P531 493 aa24.35■■□□□ 1.49
KDM2A-202ENST00000398645 HTATSF1O43719 755 aaKnown RBP24.33■■□□□ 1.49
KDM2A-202ENST00000398645 ROCK2O75116 1388 aaKnown RBP24.33■■□□□ 1.49
KDM2A-202ENST00000398645 TPD52L1Q16890 204 aaPredicted RBP24.32■■□□□ 1.48
KDM2A-202ENST00000398645 ELL2O00472 640 aaPredicted RBP24.32■■□□□ 1.48
KDM2A-202ENST00000398645 SF3A1Q15459 793 aaKnown RBP24.32■■□□□ 1.48
KDM2A-202ENST00000398645 TPM3P06753 285 aa24.31■■□□□ 1.48
KDM2A-202ENST00000398645 RAD21O60216 631 aa24.31■■□□□ 1.48
KDM2A-202ENST00000398645 PMFBP1Q8TBY8 1022 aa24.31■■□□□ 1.48
KDM2A-202ENST00000398645 MARCH6O60337 910 aa24.3■■□□□ 1.48
KDM2A-202ENST00000398645 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.3■■□□□ 1.48
KDM2A-202ENST00000398645 FAM13BQ9NYF5 915 aa24.29■■□□□ 1.48
KDM2A-202ENST00000398645 TRHP20396 242 aaPredicted RBP24.29■■□□□ 1.48
KDM2A-202ENST00000398645 HDGFL2Q7Z4V5 671 aaPredicted RBP24.29■■□□□ 1.48
KDM2A-202ENST00000398645 H3BQV1 296 aa24.29■■□□□ 1.48
KDM2A-202ENST00000398645 IFFO2Q5TF58 517 aa24.29■■□□□ 1.48
KDM2A-202ENST00000398645 CCER2I3L3R5 266 aa24.28■■□□□ 1.48
KDM2A-202ENST00000398645 SETQ01105 290 aaPredicted RBP24.27■■□□□ 1.48
KDM2A-202ENST00000398645 PKD2Q13563 968 aa24.27■■□□□ 1.48
KDM2A-202ENST00000398645 MCTP1Q6DN14 999 aa24.27■■□□□ 1.48
KDM2A-202ENST00000398645 GPATCH3Q96I76 525 aa24.27■■□□□ 1.48
KDM2A-202ENST00000398645 KIF16BQ96L93 1317 aa24.27■■□□□ 1.48
KDM2A-202ENST00000398645 G3V3G9 751 aa24.26■■□□□ 1.47
KDM2A-202ENST00000398645 DCAF8Q5TAQ9 597 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms