RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 B4GALNT3Q6L9W6 998 aa15.63■□□□□ 0.09
SMU1-201ENST00000397149 CCAR2Q8N163 923 aaKnown RBP15.63■□□□□ 0.09
SMU1-201ENST00000397149 NOL8Q76FK4 1167 aaKnown RBP15.62■□□□□ 0.09
SMU1-201ENST00000397149 GORABQ5T7V8 394 aa15.61■□□□□ 0.09
SMU1-201ENST00000397149 DEKP35659 375 aaKnown RBP15.6■□□□□ 0.09
SMU1-201ENST00000397149 TPM3P06753 285 aa15.6■□□□□ 0.09
SMU1-201ENST00000397149 TOMM22Q9NS69 142 aa15.6■□□□□ 0.09
SMU1-201ENST00000397149 FOXD4L1Q9NU39 408 aa15.58■□□□□ 0.08
SMU1-201ENST00000397149 CHMP4BQ9H444 224 aaKnown RBP15.57■□□□□ 0.08
SMU1-201ENST00000397149 SAFB2Q14151 953 aaKnown RBP eCLIP15.57■□□□□ 0.08
SMU1-201ENST00000397149 RAD21O60216 631 aa15.56■□□□□ 0.08
SMU1-201ENST00000397149 SLKQ9H2G2 1235 aaPredicted RBP15.56■□□□□ 0.08
SMU1-201ENST00000397149 FOXD4L5Q5VV16 416 aaPredicted RBP15.56■□□□□ 0.08
SMU1-201ENST00000397149 FOXD4L4Q8WXT5 416 aaPredicted RBP15.56■□□□□ 0.08
SMU1-201ENST00000397149 RRP12Q5JTH9 1297 aaKnown RBP15.56■□□□□ 0.08
SMU1-201ENST00000397149 CSB-PGBD3P0DP91 1061 aa15.55■□□□□ 0.08
SMU1-201ENST00000397149 CSRNP3Q8WYN3 585 aa15.55■□□□□ 0.08
SMU1-201ENST00000397149 RTF1Q92541 710 aaKnown RBP15.55■□□□□ 0.08
SMU1-201ENST00000397149 PAK3O75914 559 aaPredicted RBP15.55■□□□□ 0.08
SMU1-201ENST00000397149 FRAT2O75474 233 aaPredicted RBP15.54■□□□□ 0.08
SMU1-201ENST00000397149 MLECQ14165 292 aa15.54■□□□□ 0.08
SMU1-201ENST00000397149 TPD52L1Q16890 204 aaPredicted RBP15.53■□□□□ 0.08
SMU1-201ENST00000397149 CARD11Q9BXL7 1154 aa15.53■□□□□ 0.08
SMU1-201ENST00000397149 HTATSF1O43719 755 aaKnown RBP15.52■□□□□ 0.07
SMU1-201ENST00000397149 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.51■□□□□ 0.07
SMU1-201ENST00000397149 TRHP20396 242 aaPredicted RBP15.51■□□□□ 0.07
SMU1-201ENST00000397149 CDCA8Q53HL2 280 aa15.51■□□□□ 0.07
SMU1-201ENST00000397149 MS4A1P11836 297 aa15.5■□□□□ 0.07
SMU1-201ENST00000397149 TRIM6-TRIM34B2RNG4 842 aa15.5■□□□□ 0.07
SMU1-201ENST00000397149 GBP4Q96PP9 640 aa15.49■□□□□ 0.07
SMU1-201ENST00000397149 CCDC34Q96HJ3 373 aa15.49■□□□□ 0.07
SMU1-201ENST00000397149 TCEAL9Q9UHQ7 104 aa15.48■□□□□ 0.07
SMU1-201ENST00000397149 SRPK2P78362 688 aaKnown RBP15.47■□□□□ 0.07
SMU1-201ENST00000397149 PPP4R2Q9NY27 417 aa15.47■□□□□ 0.07
SMU1-201ENST00000397149 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.47■□□□□ 0.07
SMU1-201ENST00000397149 ABCC9O60706 1549 aa15.46■□□□□ 0.07
SMU1-201ENST00000397149 SF3A1Q15459 793 aaKnown RBP15.46■□□□□ 0.07
SMU1-201ENST00000397149 SYAP1Q96A49 352 aaPredicted RBP15.46■□□□□ 0.07
SMU1-201ENST00000397149 MTUS2Q5JR59 1369 aa15.46■□□□□ 0.07
SMU1-201ENST00000397149 FOXD4L6Q3SYB3 417 aaPredicted RBP15.46■□□□□ 0.07
SMU1-201ENST00000397149 FOXD4L3Q6VB84 417 aaPredicted RBP15.46■□□□□ 0.07
SMU1-201ENST00000397149 USP35Q9P2H5 1018 aa15.46■□□□□ 0.07
SMU1-201ENST00000397149 CHMP7Q8WUX9 453 aaPredicted RBP15.46■□□□□ 0.06
SMU1-201ENST00000397149 TSR1Q2NL82 804 aaKnown RBP15.45■□□□□ 0.06
SMU1-201ENST00000397149 PCMTD1Q96MG8 357 aaPredicted RBP15.45■□□□□ 0.06
SMU1-201ENST00000397149 GTF2E1P29083 439 aaPredicted RBP15.44■□□□□ 0.06
SMU1-201ENST00000397149 SAMD1Q6SPF0 538 aaPredicted RBP15.44■□□□□ 0.06
SMU1-201ENST00000397149 MSH5O43196 834 aa15.44■□□□□ 0.06
SMU1-201ENST00000397149 BCL11BQ9C0K0 894 aaPredicted RBP15.43■□□□□ 0.06
SMU1-201ENST00000397149 MFAP1P55081 439 aaKnown RBP15.43■□□□□ 0.06
SMU1-201ENST00000397149 ZNF592Q92610 1267 aa15.43■□□□□ 0.06
SMU1-201ENST00000397149 ITPRIPQ8IWB1 547 aa15.42■□□□□ 0.06
SMU1-201ENST00000397149 CTDP1Q9Y5B0 961 aaPredicted RBP15.42■□□□□ 0.06
SMU1-201ENST00000397149 ZNF771Q7L3S4 317 aaPredicted RBP15.41■□□□□ 0.06
SMU1-201ENST00000397149 STK26Q9P289 416 aa15.41■□□□□ 0.06
SMU1-201ENST00000397149 CWC22Q9HCG8 908 aaKnown RBP15.4■□□□□ 0.06
SMU1-201ENST00000397149 CALD1Q05682 793 aaKnown RBP15.38■□□□□ 0.05
SMU1-201ENST00000397149 SLC4A10Q6U841 1118 aa15.38■□□□□ 0.05
SMU1-201ENST00000397149 KLHL34Q8N239 644 aa15.38■□□□□ 0.05
SMU1-201ENST00000397149 VSIG10Q8N0Z9 540 aa15.38■□□□□ 0.05
SMU1-201ENST00000397149 GOLGA6L3A6NEY3 463 aa15.38■□□□□ 0.05
SMU1-201ENST00000397149 PAF1Q8N7H5 531 aa15.38■□□□□ 0.05
SMU1-201ENST00000397149 PLCD4Q9BRC7 762 aa15.37■□□□□ 0.05
SMU1-201ENST00000397149 MORC1Q86VD1 984 aa15.37■□□□□ 0.05
SMU1-201ENST00000397149 GPATCH3Q96I76 525 aa15.37■□□□□ 0.05
SMU1-201ENST00000397149 APPP05067 770 aa15.36■□□□□ 0.05
SMU1-201ENST00000397149 TPM2P07951 284 aa15.36■□□□□ 0.05
SMU1-201ENST00000397149 CCDC70Q6NSX1 233 aa15.36■□□□□ 0.05
SMU1-201ENST00000397149 FBXW7Q969H0 707 aa15.36■□□□□ 0.05
SMU1-201ENST00000397149 H3BQV1 296 aa15.35■□□□□ 0.05
SMU1-201ENST00000397149 SKIDA1Q1XH10 827 aa15.35■□□□□ 0.05
SMU1-201ENST00000397149 IFFO2Q5TF58 517 aa15.35■□□□□ 0.05
SMU1-201ENST00000397149 TRIM34Q9BYJ4 488 aa15.34■□□□□ 0.05
SMU1-201ENST00000397149 ZFYVE27Q5T4F4 411 aa15.34■□□□□ 0.05
SMU1-201ENST00000397149 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.34■□□□□ 0.05
SMU1-201ENST00000397149 DHX37Q8IY37 1157 aaKnown RBP15.33■□□□□ 0.04
SMU1-201ENST00000397149 CFAP44Q96MT7 982 aa15.33■□□□□ 0.04
SMU1-201ENST00000397149 HSP90AA2PQ14568 343 aaPredicted RBP15.32■□□□□ 0.04
SMU1-201ENST00000397149 NAP1L1P55209 391 aaKnown RBP15.32■□□□□ 0.04
SMU1-201ENST00000397149 AKAP17AQ02040 695 aaKnown RBP15.32■□□□□ 0.04
SMU1-201ENST00000397149 CSPP1Q1MSJ5 1256 aa15.32■□□□□ 0.04
SMU1-201ENST00000397149 DHX16O60231 1041 aaKnown RBP15.32■□□□□ 0.04
SMU1-201ENST00000397149 TPM1P09493 284 aa15.31■□□□□ 0.04
SMU1-201ENST00000397149 ODF2Q5BJF6 829 aa15.31■□□□□ 0.04
SMU1-201ENST00000397149 MCTP1Q6DN14 999 aa15.31■□□□□ 0.04
SMU1-201ENST00000397149 MAP7D2Q96T17 732 aa15.31■□□□□ 0.04
SMU1-201ENST00000397149 KIF16BQ96L93 1317 aa15.31■□□□□ 0.04
SMU1-201ENST00000397149 GOLGA6L19H0YKK7 550 aa15.31■□□□□ 0.04
SMU1-201ENST00000397149 CT47A1Q5JQC4 288 aaPredicted RBP15.31■□□□□ 0.04
SMU1-201ENST00000397149 GPS2Q13227 327 aa15.31■□□□□ 0.04
SMU1-201ENST00000397149 PLEKHD1A6NEE1 506 aa15.3■□□□□ 0.04
SMU1-201ENST00000397149 BECN2A8MW95 431 aa15.29■□□□□ 0.04
SMU1-201ENST00000397149 IPO8O15397 1037 aaKnown RBP15.29■□□□□ 0.04
SMU1-201ENST00000397149 LTV1Q96GA3 475 aaPredicted RBP15.29■□□□□ 0.04
SMU1-201ENST00000397149 FAM184AQ8NB25 1140 aa15.29■□□□□ 0.04
SMU1-201ENST00000397149 CCDC43Q96MW1 224 aaKnown RBP15.28■□□□□ 0.04
SMU1-201ENST00000397149 STK31Q9BXU1 1019 aa15.27■□□□□ 0.04
SMU1-201ENST00000397149 U2AF1L5P0DN76 240 aaPredicted RBP15.26■□□□□ 0.03
SMU1-201ENST00000397149 U2AF1Q01081 240 aaKnown RBP eCLIP15.26■□□□□ 0.03
SMU1-201ENST00000397149 IPO7O95373 1038 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms