RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 MLECQ14165 292 aa14.31□□□□□ -0.12
SCFD1-202ENST00000396629 STRCQ7RTU9 1775 aa14.31□□□□□ -0.12
SCFD1-202ENST00000396629 PLCH2O75038 1416 aa14.3□□□□□ -0.12
SCFD1-202ENST00000396629 SCAPERQ9BY12 1400 aa14.3□□□□□ -0.12
SCFD1-202ENST00000396629 ATP10AO60312 1499 aa14.3□□□□□ -0.12
SCFD1-202ENST00000396629 C9orf84Q5VXU9 1444 aa14.29□□□□□ -0.12
SCFD1-202ENST00000396629 RANGAP1P46060 587 aaPredicted RBP14.29□□□□□ -0.12
SCFD1-202ENST00000396629 CDK13Q14004 1512 aaKnown RBP14.28□□□□□ -0.12
SCFD1-202ENST00000396629 EEA1Q15075 1411 aa14.28□□□□□ -0.12
SCFD1-202ENST00000396629 SETD1BQ9UPS6 1966 aaKnown RBP14.28□□□□□ -0.12
SCFD1-202ENST00000396629 MYO5CQ9NQX4 1742 aa14.27□□□□□ -0.13
SCFD1-202ENST00000396629 ILDR2Q71H61 639 aa14.25□□□□□ -0.13
SCFD1-202ENST00000396629 DMRT2Q9Y5R5 561 aa14.25□□□□□ -0.13
SCFD1-202ENST00000396629 DISP3Q9P2K9 1392 aa14.25□□□□□ -0.13
SCFD1-202ENST00000396629 CEBPAP49715 358 aaPredicted RBP14.24□□□□□ -0.13
SCFD1-202ENST00000396629 SOCS7O14512 581 aa14.24□□□□□ -0.13
SCFD1-202ENST00000396629 EFCAB2Q5VUJ9 269 aa14.23□□□□□ -0.13
SCFD1-202ENST00000396629 UHRF1BP1Q6BDS2 1440 aa14.22□□□□□ -0.13
SCFD1-202ENST00000396629 KDM5CP41229 1560 aa14.22□□□□□ -0.13
SCFD1-202ENST00000396629 REREQ9P2R6 1566 aa14.21□□□□□ -0.14
SCFD1-202ENST00000396629 ZNF518AQ6AHZ1 1483 aa14.21□□□□□ -0.14
SCFD1-202ENST00000396629 PTPRTO14522 1441 aa14.2□□□□□ -0.14
SCFD1-202ENST00000396629 C3P01024 1663 aa14.2□□□□□ -0.14
SCFD1-202ENST00000396629 KIF14Q15058 1648 aa14.19□□□□□ -0.14
SCFD1-202ENST00000396629 DIP2CQ9Y2E4 1556 aa14.19□□□□□ -0.14
SCFD1-202ENST00000396629 SPATA31D1Q6ZQQ2 1576 aa14.17□□□□□ -0.14
SCFD1-202ENST00000396629 AFAP1Q8N556 730 aa14.16□□□□□ -0.14
SCFD1-202ENST00000396629 LTBP4Q8N2S1 1624 aa14.16□□□□□ -0.14
SCFD1-202ENST00000396629 FMN1Q68DA7 1419 aa14.16□□□□□ -0.14
SCFD1-202ENST00000396629 ARHGAP5Q13017 1502 aa14.16□□□□□ -0.14
SCFD1-202ENST00000396629 CDK11AQ9UQ88 783 aaPredicted RBP14.15□□□□□ -0.14
SCFD1-202ENST00000396629 ABCA6Q8N139 1617 aa14.15□□□□□ -0.14
SCFD1-202ENST00000396629 IQSEC2Q5JU85 1478 aa14.15□□□□□ -0.14
SCFD1-202ENST00000396629 AGLP35573 1532 aa14.15□□□□□ -0.14
SCFD1-202ENST00000396629 CDC42BPBQ9Y5S2 1711 aa14.15□□□□□ -0.14
SCFD1-202ENST00000396629 TROQ12816 1431 aaPredicted RBP14.15□□□□□ -0.14
SCFD1-202ENST00000396629 MLH3Q9UHC1 1453 aa14.15□□□□□ -0.15
SCFD1-202ENST00000396629 LRRIQ1Q96JM4 1722 aa14.13□□□□□ -0.15
SCFD1-202ENST00000396629 TRAPPC8Q9Y2L5 1435 aa14.12□□□□□ -0.15
SCFD1-202ENST00000396629 ATP1B4Q9UN42 357 aaPredicted RBP14.12□□□□□ -0.15
SCFD1-202ENST00000396629 ARHGAP35Q9NRY4 1499 aa14.11□□□□□ -0.15
SCFD1-202ENST00000396629 CLIP1P30622 1438 aa14.11□□□□□ -0.15
SCFD1-202ENST00000396629 NCOA1Q15788 1441 aa14.11□□□□□ -0.15
SCFD1-202ENST00000396629 MYT1LQ9UL68 1186 aa14.1□□□□□ -0.15
SCFD1-202ENST00000396629 ITSN2Q9NZM3 1697 aa14.1□□□□□ -0.15
SCFD1-202ENST00000396629 PREX2Q70Z35 1606 aa14.09□□□□□ -0.15
SCFD1-202ENST00000396629 KIDINS220Q9ULH0 1771 aa14.09□□□□□ -0.15
SCFD1-202ENST00000396629 ABCC1P33527 1531 aa14.09□□□□□ -0.15
SCFD1-202ENST00000396629 CNTLNQ9NXG0 1405 aa14.08□□□□□ -0.15
SCFD1-202ENST00000396629 MROH2AA6NES4 1674 aa14.08□□□□□ -0.16
SCFD1-202ENST00000396629 ESF1Q9H501 851 aaKnown RBP14.08□□□□□ -0.16
SCFD1-202ENST00000396629 NPATQ14207 1427 aa14.06□□□□□ -0.16
SCFD1-202ENST00000396629 CAMSAP1Q5T5Y3 1602 aa14.05□□□□□ -0.16
SCFD1-202ENST00000396629 CDC42BPAQ5VT25 1732 aa14.05□□□□□ -0.16
SCFD1-202ENST00000396629 UBTFP17480 764 aaKnown RBP14.04□□□□□ -0.16
SCFD1-202ENST00000396629 PHF23Q9BUL5 403 aaPredicted RBP14.04□□□□□ -0.16
SCFD1-202ENST00000396629 ZNF142P52746 1687 aaPredicted RBP14.01□□□□□ -0.17
SCFD1-202ENST00000396629 SAMD9LQ8IVG5 1584 aa14.01□□□□□ -0.17
SCFD1-202ENST00000396629 ZMYM3Q14202 1370 aa14.01□□□□□ -0.17
SCFD1-202ENST00000396629 CCDC18Q5T9S5 1454 aa14□□□□□ -0.17
SCFD1-202ENST00000396629 SUPT6HQ7KZ85 1726 aaKnown RBP13.99□□□□□ -0.17
SCFD1-202ENST00000396629 NCKAP5LQ9HCH0 1330 aa13.99□□□□□ -0.17
SCFD1-202ENST00000396629 PLA2R1Q13018 1463 aa13.99□□□□□ -0.17
SCFD1-202ENST00000396629 CLTCQ00610 1675 aaKnown RBP13.99□□□□□ -0.17
SCFD1-202ENST00000396629 EHMT2Q96KQ7 1210 aa13.98□□□□□ -0.17
SCFD1-202ENST00000396629 ZNF335Q9H4Z2 1342 aaPredicted RBP13.98□□□□□ -0.17
SCFD1-202ENST00000396629 CASKIN1Q8WXD9 1431 aa13.98□□□□□ -0.17
SCFD1-202ENST00000396629 MYO3AQ8NEV4 1616 aa13.98□□□□□ -0.17
SCFD1-202ENST00000396629 PKD2Q13563 968 aa13.97□□□□□ -0.17
SCFD1-202ENST00000396629 TCOF1Q13428 1488 aaKnown RBP13.97□□□□□ -0.17
SCFD1-202ENST00000396629 UBAP1LF5GYI3 381 aa13.97□□□□□ -0.17
SCFD1-202ENST00000396629 PLXNC1O60486 1568 aa13.96□□□□□ -0.18
SCFD1-202ENST00000396629 CEP170BQ9Y4F5 1589 aaPredicted RBP13.96□□□□□ -0.18
SCFD1-202ENST00000396629 SYCP2Q9BX26 1530 aa13.95□□□□□ -0.18
SCFD1-202ENST00000396629 PTPRKQ15262 1439 aa13.95□□□□□ -0.18
SCFD1-202ENST00000396629 SPAG9O60271 1321 aaKnown RBP13.94□□□□□ -0.18
SCFD1-202ENST00000396629 ATP7AQ04656 1500 aa13.94□□□□□ -0.18
SCFD1-202ENST00000396629 INO80Q9ULG1 1556 aaPredicted RBP13.94□□□□□ -0.18
SCFD1-202ENST00000396629 GPATCH8Q9UKJ3 1502 aaKnown RBP13.93□□□□□ -0.18
SCFD1-202ENST00000396629 A2MP01023 1474 aa13.92□□□□□ -0.18
SCFD1-202ENST00000396629 HNRNPMP52272 730 aaKnown RBP eCLIP13.91□□□□□ -0.182e-6■■■■□ 19.7
SCFD1-202ENST00000396629 ZNF777Q9ULD5 760 aaPredicted RBP13.91□□□□□ -0.18
SCFD1-202ENST00000396629 KIAA1107Q9UPP5 1409 aa13.91□□□□□ -0.18
SCFD1-202ENST00000396629 SENP3Q9H4L4 574 aaPredicted RBP13.9□□□□□ -0.18
SCFD1-202ENST00000396629 PLEKHH2Q8IVE3 1493 aa13.9□□□□□ -0.18
SCFD1-202ENST00000396629 FYCO1Q9BQS8 1478 aa13.9□□□□□ -0.18
SCFD1-202ENST00000396629 ADGBQ8N7X0 1667 aa13.9□□□□□ -0.18
SCFD1-202ENST00000396629 PPP6R1Q9UPN7 881 aa13.9□□□□□ -0.18
SCFD1-202ENST00000396629 DNMT1P26358 1616 aaKnown RBP13.89□□□□□ -0.19
SCFD1-202ENST00000396629 A2ML1A8K2U0 1454 aa13.88□□□□□ -0.19
SCFD1-202ENST00000396629 MED1Q15648 1581 aaPredicted RBP13.88□□□□□ -0.19
SCFD1-202ENST00000396629 POLR1AO95602 1720 aaPredicted RBP13.88□□□□□ -0.19
SCFD1-202ENST00000396629 GGT6Q6P531 493 aa13.87□□□□□ -0.19
SCFD1-202ENST00000396629 CPS1P31327 1500 aa13.86□□□□□ -0.19
SCFD1-202ENST00000396629 HSPA1LP34931 641 aa13.85□□□□□ -0.19
SCFD1-202ENST00000396629 NEURL4Q96JN8 1562 aa13.85□□□□□ -0.19
SCFD1-202ENST00000396629 CFDP1Q9UEE9 299 aaPredicted RBP13.85□□□□□ -0.19
SCFD1-202ENST00000396629 SHANK2Q9UPX8 1470 aa13.83□□□□□ -0.2
SCFD1-202ENST00000396629 CCNB3Q8WWL7 1395 aa13.83□□□□□ -0.2
SCFD1-202ENST00000396629 TOM1O60784 492 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms