RNA–Protein interactions for RNA: ENST00000396193.5

PDE1C-206, Transcript of phosphodiesterase 1C, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PDE1C, Length 5,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-206ENST00000396193 PKD2Q13563 968 aa22.72■■□□□ 1.23
PDE1C-206ENST00000396193 CHAF1AQ13111 956 aaPredicted RBP22.71■■□□□ 1.23
PDE1C-206ENST00000396193 L3MBTL2Q969R5 705 aa22.7■■□□□ 1.23
PDE1C-206ENST00000396193 GZF1Q9H116 711 aaPredicted RBP22.7■■□□□ 1.22
PDE1C-206ENST00000396193 U2SURPO15042 1029 aaKnown RBP22.7■■□□□ 1.22
PDE1C-206ENST00000396193 ZRSR1Q15695 479 aaKnown RBP22.69■■□□□ 1.22
PDE1C-206ENST00000396193 GOLGA6L3A6NEY3 463 aa22.69■■□□□ 1.22
PDE1C-206ENST00000396193 FMN1Q68DA7 1419 aa22.66■■□□□ 1.22
PDE1C-206ENST00000396193 PDE3BQ13370 1112 aa22.65■■□□□ 1.22
PDE1C-206ENST00000396193 GBP4Q96PP9 640 aa22.65■■□□□ 1.22
PDE1C-206ENST00000396193 HSP90AA2PQ14568 343 aaPredicted RBP22.64■■□□□ 1.22
PDE1C-206ENST00000396193 GSE1Q14687 1217 aa22.64■■□□□ 1.21
PDE1C-206ENST00000396193 PLPPR3Q6T4P5 718 aa22.63■■□□□ 1.21
PDE1C-206ENST00000396193 PTMSP20962 102 aa22.62■■□□□ 1.21
PDE1C-206ENST00000396193 NLRP13Q86W25 1043 aa22.61■■□□□ 1.21
PDE1C-206ENST00000396193 MORC1Q86VD1 984 aa22.6■■□□□ 1.21
PDE1C-206ENST00000396193 RWDD1Q9H446 243 aaPredicted RBP22.6■■□□□ 1.21
PDE1C-206ENST00000396193 PDE4AP27815 886 aa22.6■■□□□ 1.21
PDE1C-206ENST00000396193 PRKRIP1Q9H875 184 aaPredicted RBP22.59■■□□□ 1.21
PDE1C-206ENST00000396193 ZBED9Q6R2W3 1325 aa22.59■■□□□ 1.21
PDE1C-206ENST00000396193 VSIG10Q8N0Z9 540 aa22.57■■□□□ 1.2
PDE1C-206ENST00000396193 RAPGEF2Q9Y4G8 1499 aa22.56■■□□□ 1.2
PDE1C-206ENST00000396193 ROCK2O75116 1388 aaKnown RBP22.56■■□□□ 1.2
PDE1C-206ENST00000396193 GOLGA2Q08379 1002 aa22.55■■□□□ 1.2
PDE1C-206ENST00000396193 POGKQ9P215 609 aa22.55■■□□□ 1.2
PDE1C-206ENST00000396193 CFAP44Q96MT7 982 aa22.54■■□□□ 1.2
PDE1C-206ENST00000396193 GOLGA6L6A8MZA4 724 aa22.54■■□□□ 1.2
PDE1C-206ENST00000396193 NRDCO43847 1150 aa22.54■■□□□ 1.2
PDE1C-206ENST00000396193 ARID3AQ99856 593 aa22.53■■□□□ 1.2
PDE1C-206ENST00000396193 PMFBP1Q8TBY8 1022 aa22.53■■□□□ 1.2
PDE1C-206ENST00000396193 KIAA2012Q0VF49 1180 aa22.52■■□□□ 1.2
PDE1C-206ENST00000396193 IPO8O15397 1037 aaKnown RBP22.52■■□□□ 1.2
PDE1C-206ENST00000396193 C14orf37Q86TY3 774 aa22.51■■□□□ 1.19
PDE1C-206ENST00000396193 EIF4G1Q04637 1599 aaKnown RBP22.5■■□□□ 1.19
PDE1C-206ENST00000396193 ZBTB7CA1YPR0 619 aa22.5■■□□□ 1.19
PDE1C-206ENST00000396193 EXOC6Q8TAG9 804 aa22.49■■□□□ 1.19
PDE1C-206ENST00000396193 NUP155O75694 1391 aa22.49■■□□□ 1.19
PDE1C-206ENST00000396193 AMER1Q5JTC6 1135 aaPredicted RBP22.49■■□□□ 1.19
PDE1C-206ENST00000396193 MFAP1P55081 439 aaKnown RBP22.48■■□□□ 1.19
PDE1C-206ENST00000396193 RUSC2Q8N2Y8 1516 aa22.48■■□□□ 1.19
PDE1C-206ENST00000396193 GOLGA6L4A6NEF3 574 aa22.48■■□□□ 1.19
PDE1C-206ENST00000396193 MCCP23508 829 aa22.48■■□□□ 1.19
PDE1C-206ENST00000396193 SLC4A3P48751 1232 aa22.47■■□□□ 1.19
PDE1C-206ENST00000396193 WIZO95785 1651 aa22.47■■□□□ 1.19
PDE1C-206ENST00000396193 RRP1P56182 461 aaKnown RBP22.47■■□□□ 1.19
PDE1C-206ENST00000396193 KCNJ4P48050 445 aa22.46■■□□□ 1.19
PDE1C-206ENST00000396193 ITPRIPQ8IWB1 547 aa22.46■■□□□ 1.19
PDE1C-206ENST00000396193 FAM161AQ3B820 660 aa22.45■■□□□ 1.19
PDE1C-206ENST00000396193 MYBBP1AQ9BQG0 1328 aaKnown RBP22.45■■□□□ 1.18
PDE1C-206ENST00000396193 TOP2AP11388 1531 aaKnown RBP22.45■■□□□ 1.18
PDE1C-206ENST00000396193 CENPQQ7L2Z9 268 aaPredicted RBP22.45■■□□□ 1.18
PDE1C-206ENST00000396193 KIF15Q9NS87 1388 aa22.45■■□□□ 1.18
PDE1C-206ENST00000396193 U2AF1L5P0DN76 240 aaPredicted RBP22.44■■□□□ 1.18
PDE1C-206ENST00000396193 U2AF1Q01081 240 aaKnown RBP eCLIP22.44■■□□□ 1.18
PDE1C-206ENST00000396193 OS9Q13438 667 aaPredicted RBP22.43■■□□□ 1.18
PDE1C-206ENST00000396193 FGD1P98174 961 aa22.42■■□□□ 1.18
PDE1C-206ENST00000396193 PHLDB1Q86UU1 1377 aa22.42■■□□□ 1.18
PDE1C-206ENST00000396193 PLEKHG5O94827 1062 aa22.42■■□□□ 1.18
PDE1C-206ENST00000396193 PLIN1O60240 522 aa22.41■■□□□ 1.18
PDE1C-206ENST00000396193 DRC7Q8IY82 874 aa22.41■■□□□ 1.18
PDE1C-206ENST00000396193 ANKRD30AQ9BXX3 1397 aa22.4■■□□□ 1.18
PDE1C-206ENST00000396193 CLUAP1Q96AJ1 413 aa22.4■■□□□ 1.18
PDE1C-206ENST00000396193 CENPJQ9HC77 1338 aaPredicted RBP22.4■■□□□ 1.18
PDE1C-206ENST00000396193 HAP1P54257 671 aaPredicted RBP22.4■■□□□ 1.18
PDE1C-206ENST00000396193 SRPK2P78362 688 aaKnown RBP22.39■■□□□ 1.18
PDE1C-206ENST00000396193 FHOD3Q2V2M9 1422 aa22.39■■□□□ 1.17
PDE1C-206ENST00000396193 CCDC146Q8IYE0 955 aa22.39■■□□□ 1.17
PDE1C-206ENST00000396193 APBB1O00213 710 aa22.38■■□□□ 1.17
PDE1C-206ENST00000396193 CALD1Q05682 793 aaKnown RBP22.37■■□□□ 1.17
PDE1C-206ENST00000396193 KANK1Q14678 1352 aa22.37■■□□□ 1.17
PDE1C-206ENST00000396193 ST20-MTHFSA0A0A6YYL1 179 aa22.37■■□□□ 1.17
PDE1C-206ENST00000396193 CRBNQ96SW2 442 aa22.37■■□□□ 1.17
PDE1C-206ENST00000396193 SYAP1Q96A49 352 aaPredicted RBP22.36■■□□□ 1.17
PDE1C-206ENST00000396193 SMC4Q9NTJ3 1288 aa22.35■■□□□ 1.17
PDE1C-206ENST00000396193 DDX11L8A8MPP1 907 aa22.35■■□□□ 1.17
PDE1C-206ENST00000396193 SAFB2Q14151 953 aaKnown RBP eCLIP22.33■■□□□ 1.16
PDE1C-206ENST00000396193 ANO8Q9HCE9 1232 aaPredicted RBP22.3■■□□□ 1.16
PDE1C-206ENST00000396193 NAP1L2Q9ULW6 460 aaPredicted RBP22.3■■□□□ 1.16
PDE1C-206ENST00000396193 FOXD4L1Q9NU39 408 aa22.29■■□□□ 1.16
PDE1C-206ENST00000396193 CCDC18Q5T9S5 1454 aa22.28■■□□□ 1.16
PDE1C-206ENST00000396193 PANK3Q9H999 370 aa22.28■■□□□ 1.16
PDE1C-206ENST00000396193 TNNT3P45378 269 aaPredicted RBP22.27■■□□□ 1.16
PDE1C-206ENST00000396193 TAOK2Q9UL54 1235 aa22.27■■□□□ 1.16
PDE1C-206ENST00000396193 KIAA1211Q6ZU35 1233 aa22.26■■□□□ 1.15
PDE1C-206ENST00000396193 USP47Q96K76 1375 aa22.26■■□□□ 1.15
PDE1C-206ENST00000396193 SMARCA2P51531 1590 aa22.26■■□□□ 1.15
PDE1C-206ENST00000396193 TDRD9Q8NDG6 1382 aaKnown RBP22.25■■□□□ 1.15
PDE1C-206ENST00000396193 CGNL1Q0VF96 1302 aa22.24■■□□□ 1.15
PDE1C-206ENST00000396193 HDGFL2Q7Z4V5 671 aaPredicted RBP22.23■■□□□ 1.15
PDE1C-206ENST00000396193 EIF3AQ14152 1382 aaKnown RBP22.23■■□□□ 1.15
PDE1C-206ENST00000396193 NFKBIBQ15653 356 aa22.23■■□□□ 1.15
PDE1C-206ENST00000396193 SKOR2Q2VWA4 1001 aaPredicted RBP22.22■■□□□ 1.15
PDE1C-206ENST00000396193 CCDC7Q96M83 1385 aa22.22■■□□□ 1.15
PDE1C-206ENST00000396193 E9PSI1 815 aa22.21■■□□□ 1.15
PDE1C-206ENST00000396193 A0A0G2JS52 829 aa22.21■■□□□ 1.15
PDE1C-206ENST00000396193 RTF1Q92541 710 aaKnown RBP22.2■■□□□ 1.14
PDE1C-206ENST00000396193 STK26Q9P289 416 aa22.2■■□□□ 1.14
PDE1C-206ENST00000396193 COG6Q9Y2V7 657 aa22.19■■□□□ 1.14
PDE1C-206ENST00000396193 DDX49Q9Y6V7 483 aaKnown RBP22.19■■□□□ 1.14
PDE1C-206ENST00000396193 SOX12O15370 315 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms