RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 FAM13BQ9NYF5 915 aa21.58■■□□□ 1.04
SREBF1-203ENST00000395751 NRDCO43847 1150 aa21.57■■□□□ 1.04
SREBF1-203ENST00000395751 EXOC6Q8TAG9 804 aa21.57■■□□□ 1.04
SREBF1-203ENST00000395751 CALD1Q05682 793 aaKnown RBP21.56■■□□□ 1.04
SREBF1-203ENST00000395751 GOLGA6L6A8MZA4 724 aa21.56■■□□□ 1.04
SREBF1-203ENST00000395751 RALBP1Q15311 655 aa21.56■■□□□ 1.04
SREBF1-203ENST00000395751 CENPQQ7L2Z9 268 aaPredicted RBP21.56■■□□□ 1.04
SREBF1-203ENST00000395751 CHMP4BQ9H444 224 aaKnown RBP21.56■■□□□ 1.04
SREBF1-203ENST00000395751 MAP7D2Q96T17 732 aa21.55■■□□□ 1.04
SREBF1-203ENST00000395751 CFAP53Q96M91 514 aa21.55■■□□□ 1.04
SREBF1-203ENST00000395751 PRKRIP1Q9H875 184 aaPredicted RBP21.55■■□□□ 1.04
SREBF1-203ENST00000395751 RRP1P56182 461 aaKnown RBP21.54■■□□□ 1.04
SREBF1-203ENST00000395751 RRP9O43818 475 aaKnown RBP21.52■■□□□ 1.04
SREBF1-203ENST00000395751 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.52■■□□□ 1.048e-9■■□□□ 11.8
SREBF1-203ENST00000395751 RWDD1Q9H446 243 aaPredicted RBP21.52■■□□□ 1.03
SREBF1-203ENST00000395751 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.51■■□□□ 1.03
SREBF1-203ENST00000395751 SKOR2Q2VWA4 1001 aaPredicted RBP21.51■■□□□ 1.03
SREBF1-203ENST00000395751 CFAP44Q96MT7 982 aa21.5■■□□□ 1.03
SREBF1-203ENST00000395751 SYAP1Q96A49 352 aaPredicted RBP21.49■■□□□ 1.03
SREBF1-203ENST00000395751 KTN1Q86UP2 1357 aaKnown RBP21.49■■□□□ 1.03
SREBF1-203ENST00000395751 RGL3Q3MIN7 710 aa21.49■■□□□ 1.03
SREBF1-203ENST00000395751 TPM2P07951 284 aa21.48■■□□□ 1.03
SREBF1-203ENST00000395751 MFAP1P55081 439 aaKnown RBP21.48■■□□□ 1.03
SREBF1-203ENST00000395751 DRC7Q8IY82 874 aa21.48■■□□□ 1.03
SREBF1-203ENST00000395751 PMFBP1Q8TBY8 1022 aa21.48■■□□□ 1.03
SREBF1-203ENST00000395751 MTERF4Q7Z6M4 381 aaKnown RBP21.47■■□□□ 1.03
SREBF1-203ENST00000395751 MRE11P49959 708 aa21.45■■□□□ 1.02
SREBF1-203ENST00000395751 CHGAP10645 457 aaKnown RBP21.44■■□□□ 1.02
SREBF1-203ENST00000395751 BAZ1BQ9UIG0 1483 aaKnown RBP21.43■■□□□ 1.02
SREBF1-203ENST00000395751 MAPK8IP3Q9UPT6 1336 aa21.43■■□□□ 1.02
SREBF1-203ENST00000395751 GOLGA6L4A6NEF3 574 aa21.42■■□□□ 1.02
SREBF1-203ENST00000395751 CSPP1Q1MSJ5 1256 aa21.42■■□□□ 1.02
SREBF1-203ENST00000395751 NLRP13Q86W25 1043 aa21.41■■□□□ 1.02
SREBF1-203ENST00000395751 DDX49Q9Y6V7 483 aaKnown RBP21.41■■□□□ 1.02
SREBF1-203ENST00000395751 FRAT2O75474 233 aaPredicted RBP21.4■■□□□ 1.02
SREBF1-203ENST00000395751 KIF27Q86VH2 1401 aa21.4■■□□□ 1.02
SREBF1-203ENST00000395751 ZNF771Q7L3S4 317 aaPredicted RBP21.4■■□□□ 1.02
SREBF1-203ENST00000395751 CHMP5Q9NZZ3 219 aa21.4■■□□□ 1.02
SREBF1-203ENST00000395751 FHAD1B1AJZ9 1412 aa21.39■■□□□ 1.02
SREBF1-203ENST00000395751 GOLGA2Q08379 1002 aa21.38■■□□□ 1.01
SREBF1-203ENST00000395751 CRBNQ96SW2 442 aa21.38■■□□□ 1.01
SREBF1-203ENST00000395751 TMF1P82094 1093 aa21.37■■□□□ 1.01
SREBF1-203ENST00000395751 FBLN2P98095 1184 aa21.37■■□□□ 1.01
SREBF1-203ENST00000395751 PLIN1O60240 522 aa21.36■■□□□ 1.01
SREBF1-203ENST00000395751 CCDC88BA6NC98 1476 aa21.35■■□□□ 1.01
SREBF1-203ENST00000395751 MCCP23508 829 aa21.34■■□□□ 1.01
SREBF1-203ENST00000395751 L3MBTL2Q969R5 705 aa21.33■■□□□ 1
SREBF1-203ENST00000395751 BACH2Q9BYV9 841 aa21.31■■□□□ 1
SREBF1-203ENST00000395751 ROCK2O75116 1388 aaKnown RBP21.31■■□□□ 1
SREBF1-203ENST00000395751 R3HCC1Q9Y3T6 440 aaKnown RBP21.31■■□□□ 1
SREBF1-203ENST00000395751 FOXD4L1Q9NU39 408 aa21.31■■□□□ 1
SREBF1-203ENST00000395751 PHLDB1Q86UU1 1377 aa21.3■■□□□ 1
SREBF1-203ENST00000395751 PHF14O94880 888 aa21.3■■□□□ 1
SREBF1-203ENST00000395751 DCAF11Q8TEB1 546 aa21.3■■□□□ 1
SREBF1-203ENST00000395751 ZMYND15Q9H091 742 aa21.3■■□□□ 1
SREBF1-203ENST00000395751 ARHGAP35Q9NRY4 1499 aa21.28■■□□□ 1
SREBF1-203ENST00000395751 MYBBP1AQ9BQG0 1328 aaKnown RBP21.28■■□□□ 1
SREBF1-203ENST00000395751 MPHOSPH9Q99550 1183 aa21.26■□□□□ 0.99
SREBF1-203ENST00000395751 IPO8O15397 1037 aaKnown RBP21.26■□□□□ 0.99
SREBF1-203ENST00000395751 KIF15Q9NS87 1388 aa21.24■□□□□ 0.99
SREBF1-203ENST00000395751 FMN1Q68DA7 1419 aa21.24■□□□□ 0.99
SREBF1-203ENST00000395751 TRAK2O60296 914 aa21.23■□□□□ 0.99
SREBF1-203ENST00000395751 FOXD1Q16676 465 aa21.23■□□□□ 0.99
SREBF1-203ENST00000395751 CFDP1Q9UEE9 299 aaPredicted RBP21.22■□□□□ 0.99
SREBF1-203ENST00000395751 CGNL1Q0VF96 1302 aa21.22■□□□□ 0.99
SREBF1-203ENST00000395751 CENPJQ9HC77 1338 aaPredicted RBP21.22■□□□□ 0.99
SREBF1-203ENST00000395751 ISY1Q9ULR0 285 aaKnown RBP21.22■□□□□ 0.99
SREBF1-203ENST00000395751 ESPNB1AK53 854 aa21.21■□□□□ 0.99
SREBF1-203ENST00000395751 RBM10P98175 930 aaKnown RBP21.21■□□□□ 0.99
SREBF1-203ENST00000395751 NASPP49321 788 aaPredicted RBP21.21■□□□□ 0.99
SREBF1-203ENST00000395751 ITPRIPQ8IWB1 547 aa21.21■□□□□ 0.99
SREBF1-203ENST00000395751 ABCC8Q09428 1581 aa21.2■□□□□ 0.98
SREBF1-203ENST00000395751 CLUAP1Q96AJ1 413 aa21.18■□□□□ 0.98
SREBF1-203ENST00000395751 HTATSF1O43719 755 aaKnown RBP21.17■□□□□ 0.98
SREBF1-203ENST00000395751 ST18O60284 1047 aa21.17■□□□□ 0.98
SREBF1-203ENST00000395751 KIAA1211Q6ZU35 1233 aa21.16■□□□□ 0.98
SREBF1-203ENST00000395751 U2SURPO15042 1029 aaKnown RBP21.16■□□□□ 0.98
SREBF1-203ENST00000395751 KCNJ4P48050 445 aa21.15■□□□□ 0.98
SREBF1-203ENST00000395751 CCDC173Q0VFZ6 552 aa21.13■□□□□ 0.97
SREBF1-203ENST00000395751 PDCL3Q9H2J4 239 aa21.13■□□□□ 0.97
SREBF1-203ENST00000395751 CECR2Q9BXF3 1484 aa21.12■□□□□ 0.97
SREBF1-203ENST00000395751 CCDC66A2RUB6 948 aa21.12■□□□□ 0.97
SREBF1-203ENST00000395751 CNTLNQ9NXG0 1405 aa21.12■□□□□ 0.97
SREBF1-203ENST00000395751 FGD1P98174 961 aa21.11■□□□□ 0.97
SREBF1-203ENST00000395751 CCDC39Q9UFE4 941 aa21.1■□□□□ 0.97
SREBF1-203ENST00000395751 HMGN5P82970 282 aaKnown RBP21.1■□□□□ 0.97
SREBF1-203ENST00000395751 PKD2Q13563 968 aa21.1■□□□□ 0.97
SREBF1-203ENST00000395751 GOLGA6L1Q8N7Z2 621 aa21.1■□□□□ 0.97
SREBF1-203ENST00000395751 DIAPH3Q9NSV4 1193 aa21.1■□□□□ 0.97
SREBF1-203ENST00000395751 GRPEL1Q9HAV7 217 aa21.1■□□□□ 0.97
SREBF1-203ENST00000395751 MORC1Q86VD1 984 aa21.09■□□□□ 0.97
SREBF1-203ENST00000395751 COG6Q9Y2V7 657 aa21.08■□□□□ 0.97
SREBF1-203ENST00000395751 KIF16BQ96L93 1317 aa21.08■□□□□ 0.96
SREBF1-203ENST00000395751 CCDC7Q96M83 1385 aa21.08■□□□□ 0.96
SREBF1-203ENST00000395751 C11orf95C9JLR9 678 aaPredicted RBP21.08■□□□□ 0.96
SREBF1-203ENST00000395751 SMC4Q9NTJ3 1288 aa21.07■□□□□ 0.96
SREBF1-203ENST00000395751 AKNAQ7Z591 1439 aa21.07■□□□□ 0.96
SREBF1-203ENST00000395751 C22orf23Q9BZE7 217 aa21.07■□□□□ 0.96
SREBF1-203ENST00000395751 TEX35Q5T0J7 233 aa21.06■□□□□ 0.96
SREBF1-203ENST00000395751 WASHC2AQ641Q2 1341 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms