RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 DAPK1P53355 1430 aa21.4■■□□□ 1.02
CDC42SE2-202ENST00000395246 RAB3GAP2Q9H2M9 1393 aa21.4■■□□□ 1.02
CDC42SE2-202ENST00000395246 SAMD9LQ8IVG5 1584 aa21.39■■□□□ 1.01
CDC42SE2-202ENST00000395246 ABCA9Q8IUA7 1624 aa21.39■■□□□ 1.01
CDC42SE2-202ENST00000395246 PLXNC1O60486 1568 aa21.39■■□□□ 1.01
CDC42SE2-202ENST00000395246 TTC37Q6PGP7 1564 aa21.39■■□□□ 1.01
CDC42SE2-202ENST00000395246 ABCC5O15440 1437 aa21.36■■□□□ 1.01
CDC42SE2-202ENST00000395246 DENND4BO75064 1496 aaPredicted RBP21.35■■□□□ 1.01
CDC42SE2-202ENST00000395246 KDM6BO15054 1643 aa21.33■■□□□ 1.01
CDC42SE2-202ENST00000395246 MBD5Q9P267 1494 aa21.33■■□□□ 1.01
CDC42SE2-202ENST00000395246 CDK11AQ9UQ88 783 aaPredicted RBP21.33■■□□□ 1
CDC42SE2-202ENST00000395246 KIAA1107Q9UPP5 1409 aa21.3■■□□□ 1
CDC42SE2-202ENST00000395246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.27■■□□□ 1
CDC42SE2-202ENST00000395246 UNC13BO14795 1591 aa21.26■□□□□ 0.99
CDC42SE2-202ENST00000395246 PLEKHH2Q8IVE3 1493 aa21.26■□□□□ 0.99
CDC42SE2-202ENST00000395246 TIMELESSQ9UNS1 1208 aa21.24■□□□□ 0.99
CDC42SE2-202ENST00000395246 ABCC1P33527 1531 aa21.24■□□□□ 0.99
CDC42SE2-202ENST00000395246 BCORL1Q5H9F3 1711 aa21.23■□□□□ 0.99
CDC42SE2-202ENST00000395246 MAGI2Q86UL8 1455 aa21.23■□□□□ 0.99
CDC42SE2-202ENST00000395246 WDR7Q9Y4E6 1490 aa21.22■□□□□ 0.99
CDC42SE2-202ENST00000395246 CCER1Q8TC90 406 aaPredicted RBP21.21■□□□□ 0.99
CDC42SE2-202ENST00000395246 NCOA1Q15788 1441 aa21.21■□□□□ 0.99
CDC42SE2-202ENST00000395246 HNRNPUL2Q1KMD3 747 aaKnown RBP21.2■□□□□ 0.98
CDC42SE2-202ENST00000395246 CFAP74Q9C0B2 1584 aa21.2■□□□□ 0.98
CDC42SE2-202ENST00000395246 PLCH2O75038 1416 aa21.18■□□□□ 0.98
CDC42SE2-202ENST00000395246 DEPDC5O75140 1603 aa21.18■□□□□ 0.98
CDC42SE2-202ENST00000395246 INO80Q9ULG1 1556 aaPredicted RBP21.16■□□□□ 0.98
CDC42SE2-202ENST00000395246 FBLN2P98095 1184 aa21.16■□□□□ 0.98
CDC42SE2-202ENST00000395246 TTBK1Q5TCY1 1321 aaPredicted RBP21.15■□□□□ 0.98
CDC42SE2-202ENST00000395246 CCDC141Q6ZP82 1450 aa21.15■□□□□ 0.98
CDC42SE2-202ENST00000395246 GLI2P10070 1586 aa21.14■□□□□ 0.98
CDC42SE2-202ENST00000395246 EIF2AK4Q9P2K8 1649 aaKnown RBP21.13■□□□□ 0.97
CDC42SE2-202ENST00000395246 IQGAP3Q86VI3 1631 aa21.12■□□□□ 0.97
CDC42SE2-202ENST00000395246 PZPP20742 1482 aa21.11■□□□□ 0.97
CDC42SE2-202ENST00000395246 RSPH4AQ5TD94 716 aa21.1■□□□□ 0.97
CDC42SE2-202ENST00000395246 PLEKHD1A6NEE1 506 aa21.09■□□□□ 0.97
CDC42SE2-202ENST00000395246 MAP3K4Q9Y6R4 1608 aa21.09■□□□□ 0.97
CDC42SE2-202ENST00000395246 RTEL1-TNFRSF6BF6WH68 1400 aa21.09■□□□□ 0.97
CDC42SE2-202ENST00000395246 ARHGEF12Q9NZN5 1544 aa21.07■□□□□ 0.96
CDC42SE2-202ENST00000395246 SYCP2Q9BX26 1530 aa21.07■□□□□ 0.96
CDC42SE2-202ENST00000395246 C9orf84Q5VXU9 1444 aa21.05■□□□□ 0.96
CDC42SE2-202ENST00000395246 VWDEQ8N2E2 1590 aa21.05■□□□□ 0.96
CDC42SE2-202ENST00000395246 KDM5CP41229 1560 aa21.05■□□□□ 0.96
CDC42SE2-202ENST00000395246 NEURL4Q96JN8 1562 aa21.05■□□□□ 0.96
CDC42SE2-202ENST00000395246 ZFYVE16Q7Z3T8 1539 aa21.04■□□□□ 0.96
CDC42SE2-202ENST00000395246 DUOX2Q9NRD8 1548 aa21.03■□□□□ 0.96
CDC42SE2-202ENST00000395246 FAM50AQ14320 339 aaKnown RBP21.03■□□□□ 0.96
CDC42SE2-202ENST00000395246 ATP1B4Q9UN42 357 aaPredicted RBP21.01■□□□□ 0.95
CDC42SE2-202ENST00000395246 ERBINQ96RT1 1412 aa21.01■□□□□ 0.95
CDC42SE2-202ENST00000395246 ARHGAP5Q13017 1502 aa21.01■□□□□ 0.95
CDC42SE2-202ENST00000395246 ATP10AO60312 1499 aa21■□□□□ 0.95
CDC42SE2-202ENST00000395246 POLR1AO95602 1720 aaPredicted RBP21■□□□□ 0.95
CDC42SE2-202ENST00000395246 RIMBP3CA6NJZ7 1639 aa21■□□□□ 0.95
CDC42SE2-202ENST00000395246 RIMBP3BA6NNM3 1639 aa21■□□□□ 0.95
CDC42SE2-202ENST00000395246 RIMBP3Q9UFD9 1639 aa21■□□□□ 0.95
CDC42SE2-202ENST00000395246 ANKRD30AQ9BXX3 1397 aa20.98■□□□□ 0.95
CDC42SE2-202ENST00000395246 OSCARQ8IYS5 282 aa20.98■□□□□ 0.95
CDC42SE2-202ENST00000395246 RPRD2Q5VT52 1461 aaKnown RBP20.98■□□□□ 0.95
CDC42SE2-202ENST00000395246 RNF17Q9BXT8 1623 aaKnown RBP20.97■□□□□ 0.95
CDC42SE2-202ENST00000395246 CFDP1Q9UEE9 299 aaPredicted RBP20.96■□□□□ 0.95
CDC42SE2-202ENST00000395246 TEX14Q8IWB6 1497 aa20.95■□□□□ 0.94
CDC42SE2-202ENST00000395246 ANKRD30BQ9BXX2 1392 aa20.94■□□□□ 0.94
CDC42SE2-202ENST00000395246 ASXL2Q76L83 1435 aa20.94■□□□□ 0.94
CDC42SE2-202ENST00000395246 ZNF644Q9H582 1327 aaPredicted RBP20.94■□□□□ 0.94
CDC42SE2-202ENST00000395246 KIDINS220Q9ULH0 1771 aa20.92■□□□□ 0.94
CDC42SE2-202ENST00000395246 MROH1Q8NDA8 1641 aa20.91■□□□□ 0.94
CDC42SE2-202ENST00000395246 ANKRD50Q9ULJ7 1429 aa20.91■□□□□ 0.94
CDC42SE2-202ENST00000395246 PRDM15P57071 1507 aaPredicted RBP20.9■□□□□ 0.94
CDC42SE2-202ENST00000395246 PPRC1Q5VV67 1664 aaKnown RBP20.9■□□□□ 0.94
CDC42SE2-202ENST00000395246 RICTORQ6R327 1708 aa20.9■□□□□ 0.94
CDC42SE2-202ENST00000395246 NEO1Q92859 1461 aa20.88■□□□□ 0.93
CDC42SE2-202ENST00000395246 LMTK2Q8IWU2 1503 aa20.87■□□□□ 0.93
CDC42SE2-202ENST00000395246 LAMC1P11047 1609 aa20.87■□□□□ 0.93
CDC42SE2-202ENST00000395246 FAM135AQ9P2D6 1515 aa20.87■□□□□ 0.93
CDC42SE2-202ENST00000395246 ATP7AQ04656 1500 aa20.86■□□□□ 0.93
CDC42SE2-202ENST00000395246 TET3O43151 1660 aa20.85■□□□□ 0.93
CDC42SE2-202ENST00000395246 REREQ9P2R6 1566 aa20.84■□□□□ 0.93
CDC42SE2-202ENST00000395246 ZMYM4Q5VZL5 1548 aa20.84■□□□□ 0.93
CDC42SE2-202ENST00000395246 FANCAO15360 1455 aa20.83■□□□□ 0.92
CDC42SE2-202ENST00000395246 DIP2BQ9P265 1576 aa20.83■□□□□ 0.92
CDC42SE2-202ENST00000395246 MLH3Q9UHC1 1453 aa20.82■□□□□ 0.92
CDC42SE2-202ENST00000395246 UHRF1BP1Q6BDS2 1440 aa20.82■□□□□ 0.92
CDC42SE2-202ENST00000395246 CEP152O94986 1710 aa20.8■□□□□ 0.92
CDC42SE2-202ENST00000395246 ZNF316A6NFI3 1004 aaPredicted RBP20.8■□□□□ 0.92
CDC42SE2-202ENST00000395246 KIF15Q9NS87 1388 aa20.8■□□□□ 0.92
CDC42SE2-202ENST00000395246 HECW2Q9P2P5 1572 aa20.79■□□□□ 0.92
CDC42SE2-202ENST00000395246 FRMPD1Q5SYB0 1578 aa20.79■□□□□ 0.92
CDC42SE2-202ENST00000395246 E9PCH4 1651 aa20.79■□□□□ 0.92
CDC42SE2-202ENST00000395246 TRAPPC8Q9Y2L5 1435 aa20.78■□□□□ 0.92
CDC42SE2-202ENST00000395246 ZC3H13Q5T200 1668 aaKnown RBP20.77■□□□□ 0.92
CDC42SE2-202ENST00000395246 MPHOSPH9Q99550 1183 aa20.77■□□□□ 0.91
CDC42SE2-202ENST00000395246 ZNF518AQ6AHZ1 1483 aa20.76■□□□□ 0.91
CDC42SE2-202ENST00000395246 SPHKAPQ2M3C7 1700 aa20.76■□□□□ 0.91
CDC42SE2-202ENST00000395246 PPP1R15AO75807 674 aaPredicted RBP20.76■□□□□ 0.91
CDC42SE2-202ENST00000395246 POGZQ7Z3K3 1410 aa20.75■□□□□ 0.91
CDC42SE2-202ENST00000395246 KIF13AQ9H1H9 1805 aa20.73■□□□□ 0.91
CDC42SE2-202ENST00000395246 IFT172Q9UG01 1749 aa20.73■□□□□ 0.91
CDC42SE2-202ENST00000395246 TRPM2O94759 1503 aa20.73■□□□□ 0.91
CDC42SE2-202ENST00000395246 ITGAEP38570 1179 aa20.73■□□□□ 0.91
CDC42SE2-202ENST00000395246 EFCAB2Q5VUJ9 269 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms