RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 ATP10BO94823 1461 aa25.93■■□□□ 1.74
PCDHA1-202ENST00000394633 ANP32CO43423 234 aa25.9■■□□□ 1.74
PCDHA1-202ENST00000394633 FKBP8Q14318 412 aa25.87■■□□□ 1.73
PCDHA1-202ENST00000394633 ABCC2Q92887 1545 aa25.87■■□□□ 1.73
PCDHA1-202ENST00000394633 KDM5BQ9UGL1 1544 aa25.87■■□□□ 1.73
PCDHA1-202ENST00000394633 BCANQ96GW7 911 aa25.86■■□□□ 1.73
PCDHA1-202ENST00000394633 TROQ12816 1431 aaPredicted RBP25.85■■□□□ 1.73
PCDHA1-202ENST00000394633 KIF14Q15058 1648 aa25.84■■□□□ 1.73
PCDHA1-202ENST00000394633 CDK11AQ9UQ88 783 aaPredicted RBP25.83■■□□□ 1.73
PCDHA1-202ENST00000394633 GCC2Q8IWJ2 1684 aa25.81■■□□□ 1.72
PCDHA1-202ENST00000394633 TRIM52Q96A61 297 aa25.79■■□□□ 1.72
PCDHA1-202ENST00000394633 ADCY10Q96PN6 1610 aa25.77■■□□□ 1.72
PCDHA1-202ENST00000394633 TCOF1Q13428 1488 aaKnown RBP25.76■■□□□ 1.71
PCDHA1-202ENST00000394633 PLEKHD1A6NEE1 506 aa25.75■■□□□ 1.71
PCDHA1-202ENST00000394633 UHRF1BP1LA0JNW5 1464 aa25.74■■□□□ 1.71
PCDHA1-202ENST00000394633 ZCCHC11Q5TAX3 1644 aaKnown RBP25.73■■□□□ 1.71
PCDHA1-202ENST00000394633 DENND4BO75064 1496 aaPredicted RBP25.72■■□□□ 1.71
PCDHA1-202ENST00000394633 NEFLP07196 543 aa25.71■■□□□ 1.71
PCDHA1-202ENST00000394633 KDM6BO15054 1643 aa25.7■■□□□ 1.71
PCDHA1-202ENST00000394633 RRP7BPQ9NSQ0 103 aa25.69■■□□□ 1.7
PCDHA1-202ENST00000394633 AKNAQ7Z591 1439 aa25.67■■□□□ 1.7
PCDHA1-202ENST00000394633 ABCC10Q5T3U5 1492 aa25.66■■□□□ 1.7
PCDHA1-202ENST00000394633 MIA2Q96PC5 1412 aa25.66■■□□□ 1.7
PCDHA1-202ENST00000394633 GPATCH8Q9UKJ3 1502 aaKnown RBP25.66■■□□□ 1.7
PCDHA1-202ENST00000394633 CHIC2Q9UKJ5 165 aa25.65■■□□□ 1.7
PCDHA1-202ENST00000394633 ZNF644Q9H582 1327 aaPredicted RBP25.64■■□□□ 1.69
PCDHA1-202ENST00000394633 CDC42BPAQ5VT25 1732 aa25.63■■□□□ 1.69
PCDHA1-202ENST00000394633 ITSN2Q9NZM3 1697 aa25.62■■□□□ 1.69
PCDHA1-202ENST00000394633 HSPA5P11021 654 aaKnown RBP25.6■■□□□ 1.69
PCDHA1-202ENST00000394633 WASHC2AQ641Q2 1341 aa25.59■■□□□ 1.69
PCDHA1-202ENST00000394633 TTC37Q6PGP7 1564 aa25.58■■□□□ 1.69
PCDHA1-202ENST00000394633 CFDP1Q9UEE9 299 aaPredicted RBP25.56■■□□□ 1.68
PCDHA1-202ENST00000394633 ANP32EQ9BTT0 268 aa25.56■■□□□ 1.68
PCDHA1-202ENST00000394633 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.55■■□□□ 1.68
PCDHA1-202ENST00000394633 CAMSAP2Q08AD1 1489 aa25.54■■□□□ 1.68
PCDHA1-202ENST00000394633 MPHOSPH9Q99550 1183 aa25.53■■□□□ 1.68
PCDHA1-202ENST00000394633 ZNF777Q9ULD5 760 aaPredicted RBP25.52■■□□□ 1.68
PCDHA1-202ENST00000394633 RIMBP3CA6NJZ7 1639 aa25.52■■□□□ 1.68
PCDHA1-202ENST00000394633 RIMBP3BA6NNM3 1639 aa25.52■■□□□ 1.68
PCDHA1-202ENST00000394633 RIMBP3Q9UFD9 1639 aa25.52■■□□□ 1.68
PCDHA1-202ENST00000394633 CDC42BPBQ9Y5S2 1711 aa25.51■■□□□ 1.67
PCDHA1-202ENST00000394633 HNRNPUQ00839 825 aaKnown RBP eCLIP25.51■■□□□ 1.67
PCDHA1-202ENST00000394633 EIF4G2P78344 907 aaKnown RBP eCLIP25.5■■□□□ 1.67
PCDHA1-202ENST00000394633 PREX2Q70Z35 1606 aa25.49■■□□□ 1.67
PCDHA1-202ENST00000394633 CNTLNQ9NXG0 1405 aa25.48■■□□□ 1.67
PCDHA1-202ENST00000394633 DNMT1P26358 1616 aaKnown RBP25.48■■□□□ 1.67
PCDHA1-202ENST00000394633 L3MBTL2Q969R5 705 aa25.47■■□□□ 1.67
PCDHA1-202ENST00000394633 WDR7Q9Y4E6 1490 aa25.47■■□□□ 1.67
PCDHA1-202ENST00000394633 DAPK1P53355 1430 aa25.47■■□□□ 1.67
PCDHA1-202ENST00000394633 RBM19Q9Y4C8 960 aaKnown RBP25.47■■□□□ 1.67
PCDHA1-202ENST00000394633 ABCC5O15440 1437 aa25.46■■□□□ 1.67
PCDHA1-202ENST00000394633 ASXL2Q76L83 1435 aa25.45■■□□□ 1.66
PCDHA1-202ENST00000394633 FOXD1Q16676 465 aa25.44■■□□□ 1.66
PCDHA1-202ENST00000394633 MYO5CQ9NQX4 1742 aa25.43■■□□□ 1.66
PCDHA1-202ENST00000394633 CYB5RLQ6IPT4 315 aa25.43■■□□□ 1.66
PCDHA1-202ENST00000394633 NCOA1Q15788 1441 aa25.43■■□□□ 1.66
PCDHA1-202ENST00000394633 ROCK1Q13464 1354 aa25.42■■□□□ 1.66
PCDHA1-202ENST00000394633 SAMD9LQ8IVG5 1584 aa25.42■■□□□ 1.66
PCDHA1-202ENST00000394633 RPRD2Q5VT52 1461 aaKnown RBP25.41■■□□□ 1.66
PCDHA1-202ENST00000394633 POLR1AO95602 1720 aaPredicted RBP25.4■■□□□ 1.66
PCDHA1-202ENST00000394633 ANKRD30BQ9BXX2 1392 aa25.4■■□□□ 1.66
PCDHA1-202ENST00000394633 C11orf95C9JLR9 678 aaPredicted RBP25.4■■□□□ 1.66
PCDHA1-202ENST00000394633 ARHGAP5Q13017 1502 aa25.4■■□□□ 1.66
PCDHA1-202ENST00000394633 CCDC7Q96M83 1385 aa25.39■■□□□ 1.66
PCDHA1-202ENST00000394633 TEX14Q8IWB6 1497 aa25.39■■□□□ 1.66
PCDHA1-202ENST00000394633 CCDC184Q52MB2 194 aa25.38■■□□□ 1.65
PCDHA1-202ENST00000394633 CROCC2H7BZ55 1655 aa25.36■■□□□ 1.65
PCDHA1-202ENST00000394633 NBPF8Q3BBV2 869 aa25.36■■□□□ 1.65
PCDHA1-202ENST00000394633 NPM1P06748 294 aaKnown RBP eCLIP25.35■■□□□ 1.65
PCDHA1-202ENST00000394633 PLCH2O75038 1416 aa25.33■■□□□ 1.65
PCDHA1-202ENST00000394633 HNRNPMP52272 730 aaKnown RBP eCLIP25.33■■□□□ 1.65
PCDHA1-202ENST00000394633 IRX6P78412 446 aaPredicted RBP25.33■■□□□ 1.65
PCDHA1-202ENST00000394633 PRKRIP1Q9H875 184 aaPredicted RBP25.32■■□□□ 1.64
PCDHA1-202ENST00000394633 MBD5Q9P267 1494 aa25.32■■□□□ 1.64
PCDHA1-202ENST00000394633 SYCP2Q9BX26 1530 aa25.32■■□□□ 1.64
PCDHA1-202ENST00000394633 ABCA9Q8IUA7 1624 aa25.31■■□□□ 1.64
PCDHA1-202ENST00000394633 SPATA31E1Q6ZUB1 1445 aa25.3■■□□□ 1.64
PCDHA1-202ENST00000394633 ADGBQ8N7X0 1667 aa25.27■■□□□ 1.64
PCDHA1-202ENST00000394633 ARHGEF5Q12774 1597 aa25.27■■□□□ 1.64
PCDHA1-202ENST00000394633 ARHGEF12Q9NZN5 1544 aa25.26■■□□□ 1.63
PCDHA1-202ENST00000394633 SLC4A1APQ9BWU0 796 aaKnown RBP25.25■■□□□ 1.63
PCDHA1-202ENST00000394633 PZPP20742 1482 aa25.24■■□□□ 1.63
PCDHA1-202ENST00000394633 C9orf84Q5VXU9 1444 aa25.24■■□□□ 1.63
PCDHA1-202ENST00000394633 KIF7Q2M1P5 1343 aa25.24■■□□□ 1.63
PCDHA1-202ENST00000394633 ADGRL2O95490 1459 aa25.23■■□□□ 1.63
PCDHA1-202ENST00000394633 CCDC141Q6ZP82 1450 aa25.23■■□□□ 1.63
PCDHA1-202ENST00000394633 SHANK2Q9UPX8 1470 aa25.23■■□□□ 1.63
PCDHA1-202ENST00000394633 ERICH6BQ5W0A0 696 aa25.22■■□□□ 1.63
PCDHA1-202ENST00000394633 FAM9BQ8IZU0 186 aa25.22■■□□□ 1.63
PCDHA1-202ENST00000394633 MRS2Q9HD23 443 aa25.22■■□□□ 1.63
PCDHA1-202ENST00000394633 ABCC1P33527 1531 aa25.21■■□□□ 1.63
PCDHA1-202ENST00000394633 ARAP3Q8WWN8 1544 aa25.21■■□□□ 1.63
PCDHA1-202ENST00000394633 EFCAB2Q5VUJ9 269 aa25.21■■□□□ 1.63
PCDHA1-202ENST00000394633 KIAA1107Q9UPP5 1409 aa25.18■■□□□ 1.62
PCDHA1-202ENST00000394633 ZBED9Q6R2W3 1325 aa25.18■■□□□ 1.62
PCDHA1-202ENST00000394633 FANCAO15360 1455 aa25.18■■□□□ 1.62
PCDHA1-202ENST00000394633 PLEKHH2Q8IVE3 1493 aa25.16■■□□□ 1.62
PCDHA1-202ENST00000394633 TSPY4P0CV99 314 aa25.16■■□□□ 1.62
PCDHA1-202ENST00000394633 TSPY10P0CW01 314 aa25.16■■□□□ 1.62
PCDHA1-202ENST00000394633 PPP4R2Q9NY27 417 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms