RNA–Protein interactions for RNA: ENST00000394089.6

RARA-204, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RARA, Length 2,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-204ENST00000394089 AKNAQ7Z591 1439 aa33.95■■■■□ 3.02
RARA-204ENST00000394089 DNMT1P26358 1616 aaKnown RBP33.93■■■■□ 3.02
RARA-204ENST00000394089 NAIPQ13075 1403 aa33.93■■■■□ 3.02
RARA-204ENST00000394089 CDC42BPAQ5VT25 1732 aa33.93■■■■□ 3.02
RARA-204ENST00000394089 CAMSAP2Q08AD1 1489 aa33.92■■■■□ 3.02
RARA-204ENST00000394089 DAPK1P53355 1430 aa33.91■■■■□ 3.02
RARA-204ENST00000394089 ZCCHC11Q5TAX3 1644 aaKnown RBP33.91■■■■□ 3.02
RARA-204ENST00000394089 ZNF644Q9H582 1327 aaPredicted RBP33.9■■■■□ 3.02
RARA-204ENST00000394089 ABCC5O15440 1437 aa33.88■■■■□ 3.01
RARA-204ENST00000394089 GCC2Q8IWJ2 1684 aa33.85■■■■□ 3.01
RARA-204ENST00000394089 ROCK1Q13464 1354 aa33.84■■■■□ 3.01
RARA-204ENST00000394089 CHIC2Q9UKJ5 165 aa33.8■■■■□ 3
RARA-204ENST00000394089 MAPKBP1O60336 1514 aa33.79■■■■□ 3
RARA-204ENST00000394089 PREX2Q70Z35 1606 aa33.78■■■■□ 3
RARA-204ENST00000394089 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.78■■■■□ 3
RARA-204ENST00000394089 RRP7BPQ9NSQ0 103 aa33.76■■■■□ 3
RARA-204ENST00000394089 ZNF777Q9ULD5 760 aaPredicted RBP33.76■■■■□ 3
RARA-204ENST00000394089 TTC37Q6PGP7 1564 aa33.74■■■□□ 2.99
RARA-204ENST00000394089 CDC42BPBQ9Y5S2 1711 aa33.73■■■□□ 2.99
RARA-204ENST00000394089 CROCC2H7BZ55 1655 aa33.72■■■□□ 2.99
RARA-204ENST00000394089 ADGRL2O95490 1459 aa33.67■■■□□ 2.98
RARA-204ENST00000394089 ADGBQ8N7X0 1667 aa33.67■■■□□ 2.98
RARA-204ENST00000394089 MYO5CQ9NQX4 1742 aa33.66■■■□□ 2.98
RARA-204ENST00000394089 ARHGEF5Q12774 1597 aa33.66■■■□□ 2.98
RARA-204ENST00000394089 SHANK2Q9UPX8 1470 aa33.65■■■□□ 2.98
RARA-204ENST00000394089 SAMD9LQ8IVG5 1584 aa33.65■■■□□ 2.98
RARA-204ENST00000394089 KCNH8Q96L42 1107 aa33.63■■■□□ 2.97
RARA-204ENST00000394089 KDM6BO15054 1643 aa33.62■■■□□ 2.97
RARA-204ENST00000394089 WDR7Q9Y4E6 1490 aa33.62■■■□□ 2.97
RARA-204ENST00000394089 ARHGAP5Q13017 1502 aa33.61■■■□□ 2.97
RARA-204ENST00000394089 NCOA1Q15788 1441 aa33.61■■■□□ 2.97
RARA-204ENST00000394089 MBD5Q9P267 1494 aa33.61■■■□□ 2.97
RARA-204ENST00000394089 PLCH2O75038 1416 aa33.59■■■□□ 2.97
RARA-204ENST00000394089 RSPH4AQ5TD94 716 aa33.56■■■□□ 2.96
RARA-204ENST00000394089 ANKRD30AQ9BXX3 1397 aa33.56■■■□□ 2.96
RARA-204ENST00000394089 PLEKHH2Q8IVE3 1493 aa33.55■■■□□ 2.96
RARA-204ENST00000394089 C9orf84Q5VXU9 1444 aa33.54■■■□□ 2.96
RARA-204ENST00000394089 CCDC141Q6ZP82 1450 aa33.53■■■□□ 2.96
RARA-204ENST00000394089 KIAA1107Q9UPP5 1409 aa33.53■■■□□ 2.96
RARA-204ENST00000394089 HNRNPMP52272 730 aaKnown RBP eCLIP33.52■■■□□ 2.96
RARA-204ENST00000394089 ARAP3Q8WWN8 1544 aa33.52■■■□□ 2.96
RARA-204ENST00000394089 TSPY4P0CV99 314 aa33.5■■■□□ 2.95
RARA-204ENST00000394089 TSPY10P0CW01 314 aa33.5■■■□□ 2.95
RARA-204ENST00000394089 ASXL2Q76L83 1435 aa33.5■■■□□ 2.95
RARA-204ENST00000394089 ZNF316A6NFI3 1004 aaPredicted RBP33.49■■■□□ 2.95
RARA-204ENST00000394089 SYCP2Q9BX26 1530 aa33.47■■■□□ 2.95
RARA-204ENST00000394089 NPM1P06748 294 aaKnown RBP eCLIP33.47■■■□□ 2.95
RARA-204ENST00000394089 EFCAB2Q5VUJ9 269 aa33.46■■■□□ 2.95
RARA-204ENST00000394089 TRIM52Q96A61 297 aa33.45■■■□□ 2.95
RARA-204ENST00000394089 ABCA9Q8IUA7 1624 aa33.45■■■□□ 2.95
RARA-204ENST00000394089 TIMELESSQ9UNS1 1208 aa33.43■■■□□ 2.94
RARA-204ENST00000394089 MAST1Q9Y2H9 1570 aa33.43■■■□□ 2.94
RARA-204ENST00000394089 SIN3AQ96ST3 1273 aa33.41■■■□□ 2.94
RARA-204ENST00000394089 DENND4BO75064 1496 aaPredicted RBP33.4■■■□□ 2.94
RARA-204ENST00000394089 ABCC1P33527 1531 aa33.38■■■□□ 2.93
RARA-204ENST00000394089 ANKRD50Q9ULJ7 1429 aa33.38■■■□□ 2.93
RARA-204ENST00000394089 MPHOSPH9Q99550 1183 aa33.38■■■□□ 2.93
RARA-204ENST00000394089 ARHGEF12Q9NZN5 1544 aa33.36■■■□□ 2.93
RARA-204ENST00000394089 KIF15Q9NS87 1388 aa33.33■■■□□ 2.93
RARA-204ENST00000394089 RIMBP3CA6NJZ7 1639 aa33.3■■■□□ 2.92
RARA-204ENST00000394089 RIMBP3BA6NNM3 1639 aa33.3■■■□□ 2.92
RARA-204ENST00000394089 RIMBP3Q9UFD9 1639 aa33.3■■■□□ 2.92
RARA-204ENST00000394089 PLXNC1O60486 1568 aa33.27■■■□□ 2.92
RARA-204ENST00000394089 PZPP20742 1482 aa33.26■■■□□ 2.92
RARA-204ENST00000394089 FANCAO15360 1455 aa33.26■■■□□ 2.91
RARA-204ENST00000394089 TRAPPC8Q9Y2L5 1435 aa33.22■■■□□ 2.91
RARA-204ENST00000394089 SLC4A1APQ9BWU0 796 aaKnown RBP33.21■■■□□ 2.91
RARA-204ENST00000394089 KDM5DQ9BY66 1539 aa33.2■■■□□ 2.91
RARA-204ENST00000394089 TONSLQ96HA7 1378 aa33.18■■■□□ 2.9
RARA-204ENST00000394089 CYB5RLQ6IPT4 315 aa33.18■■■□□ 2.9
RARA-204ENST00000394089 ANKRD30BQ9BXX2 1392 aa33.16■■■□□ 2.9
RARA-204ENST00000394089 RTEL1-TNFRSF6BF6WH68 1400 aa33.15■■■□□ 2.9
RARA-204ENST00000394089 DUOX2Q9NRD8 1548 aa33.14■■■□□ 2.9
RARA-204ENST00000394089 PPP1R15AO75807 674 aaPredicted RBP33.13■■■□□ 2.89
RARA-204ENST00000394089 CD109Q6YHK3 1445 aa33.13■■■□□ 2.89
RARA-204ENST00000394089 ADGRL1O94910 1474 aa33.12■■■□□ 2.89
RARA-204ENST00000394089 NUP155O75694 1391 aa33.12■■■□□ 2.89
RARA-204ENST00000394089 FOXD1Q16676 465 aa33.1■■■□□ 2.89
RARA-204ENST00000394089 CFAP74Q9C0B2 1584 aa33.09■■■□□ 2.89
RARA-204ENST00000394089 SPAG9O60271 1321 aaKnown RBP33.09■■■□□ 2.89
RARA-204ENST00000394089 ERBINQ96RT1 1412 aa33.08■■■□□ 2.89
RARA-204ENST00000394089 SCAPERQ9BY12 1400 aa33.08■■■□□ 2.89
RARA-204ENST00000394089 ZFYVE16Q7Z3T8 1539 aa33.07■■■□□ 2.89
RARA-204ENST00000394089 UNC13BO14795 1591 aa33.06■■■□□ 2.88
RARA-204ENST00000394089 AFAP1Q8N556 730 aa33.06■■■□□ 2.88
RARA-204ENST00000394089 MIER1Q8N108 512 aa33.06■■■□□ 2.88
RARA-204ENST00000394089 RPRD2Q5VT52 1461 aaKnown RBP33.04■■■□□ 2.88
RARA-204ENST00000394089 INO80Q9ULG1 1556 aaPredicted RBP33.03■■■□□ 2.88
RARA-204ENST00000394089 PKD2Q13563 968 aa33.02■■■□□ 2.88
RARA-204ENST00000394089 ATP7AQ04656 1500 aa32.99■■■□□ 2.87
RARA-204ENST00000394089 GLI2P10070 1586 aa32.98■■■□□ 2.87
RARA-204ENST00000394089 FAM135AQ9P2D6 1515 aa32.97■■■□□ 2.87
RARA-204ENST00000394089 YTHDC1Q96MU7 727 aaKnown RBP32.97■■■□□ 2.87
RARA-204ENST00000394089 MAGI2Q86UL8 1455 aa32.96■■■□□ 2.87
RARA-204ENST00000394089 DNAJC5Q9H3Z4 198 aa32.95■■■□□ 2.87
RARA-204ENST00000394089 NEO1Q92859 1461 aa32.95■■■□□ 2.87
RARA-204ENST00000394089 ZNF518AQ6AHZ1 1483 aa32.94■■■□□ 2.86
RARA-204ENST00000394089 MAP3K4Q9Y6R4 1608 aa32.93■■■□□ 2.86
RARA-204ENST00000394089 IQGAP3Q86VI3 1631 aa32.92■■■□□ 2.86
RARA-204ENST00000394089 POGZQ7Z3K3 1410 aa32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms