RNA–Protein interactions for RNA: ENST00000393868.6

SUCLG1-201, Transcript of succinate-CoA ligase alpha subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUCLG1, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCLG1-201ENST00000393868 SLAIN1Q8ND83 568 aa11.47□□□□□ -0.57
SUCLG1-201ENST00000393868 TMC2Q8TDI7 906 aa11.38□□□□□ -0.59
SUCLG1-201ENST00000393868 TMEM92Q6UXU6 159 aa11.37□□□□□ -0.59
SUCLG1-201ENST00000393868 ZCCHC6Q5VYS8 1495 aaKnown RBP11.36□□□□□ -0.59
SUCLG1-201ENST00000393868 PLCB2Q00722 1185 aa11.36□□□□□ -0.59
SUCLG1-201ENST00000393868 C2orf72A6NCS6 295 aa11.33□□□□□ -0.6
SUCLG1-201ENST00000393868 SNPHO15079 494 aa11.32□□□□□ -0.6
SUCLG1-201ENST00000393868 KIF3CO14782 793 aa11.32□□□□□ -0.6
SUCLG1-201ENST00000393868 GPHNQ9NQX3 736 aaPredicted RBP11.31□□□□□ -0.6
SUCLG1-201ENST00000393868 PDE4AP27815 886 aa11.3□□□□□ -0.6
SUCLG1-201ENST00000393868 CRISPLD2Q9H0B8 497 aa11.3□□□□□ -0.6
SUCLG1-201ENST00000393868 CADPS2Q86UW7 1296 aa11.29□□□□□ -0.6
SUCLG1-201ENST00000393868 NCKAP5LQ9HCH0 1330 aa11.26□□□□□ -0.61
SUCLG1-201ENST00000393868 DOK7Q18PE1 504 aa11.25□□□□□ -0.61
SUCLG1-201ENST00000393868 FOXK1P85037 733 aa11.25□□□□□ -0.61
SUCLG1-201ENST00000393868 LARP6Q9BRS8 491 aaKnown RBP11.25□□□□□ -0.61
SUCLG1-201ENST00000393868 TSHZ2Q9NRE2 1034 aa11.24□□□□□ -0.61
SUCLG1-201ENST00000393868 SHROOM4Q9ULL8 1493 aa11.23□□□□□ -0.61
SUCLG1-201ENST00000393868 DSG2Q14126 1118 aa11.22□□□□□ -0.61
SUCLG1-201ENST00000393868 PPP1R15BQ5SWA1 713 aa11.22□□□□□ -0.61
SUCLG1-201ENST00000393868 DDX27Q96GQ7 796 aaKnown RBP11.22□□□□□ -0.61
SUCLG1-201ENST00000393868 RIMBP2O15034 1052 aa11.21□□□□□ -0.61
SUCLG1-201ENST00000393868 MFSD10Q14728 455 aa11.21□□□□□ -0.61
SUCLG1-201ENST00000393868 PLPP6Q8IY26 295 aa11.21□□□□□ -0.61
SUCLG1-201ENST00000393868 HOXB3P14651 431 aaPredicted RBP11.2□□□□□ -0.62
SUCLG1-201ENST00000393868 HAP1P54257 671 aaPredicted RBP11.2□□□□□ -0.62
SUCLG1-201ENST00000393868 FAM163AQ96GL9 167 aaPredicted RBP11.2□□□□□ -0.62
SUCLG1-201ENST00000393868 ZNF710Q8N1W2 664 aa11.19□□□□□ -0.62
SUCLG1-201ENST00000393868 ZSWIM6Q9HCJ5 1215 aa11.16□□□□□ -0.62
SUCLG1-201ENST00000393868 WDR70Q9NW82 654 aa11.16□□□□□ -0.62
SUCLG1-201ENST00000393868 DCAF1Q9Y4B6 1507 aa11.15□□□□□ -0.62
SUCLG1-201ENST00000393868 SLC34A2O95436 690 aa11.15□□□□□ -0.62
SUCLG1-201ENST00000393868 ST18O60284 1047 aa11.13□□□□□ -0.63
SUCLG1-201ENST00000393868 HOXB1P14653 301 aaPredicted RBP11.09□□□□□ -0.63
SUCLG1-201ENST00000393868 LCE2DQ5TA82 110 aaPredicted RBP11.09□□□□□ -0.63
SUCLG1-201ENST00000393868 PTCD2Q8WV60 388 aaKnown RBP11.09□□□□□ -0.63
SUCLG1-201ENST00000393868 TBC1D12O60347 775 aa11.08□□□□□ -0.64
SUCLG1-201ENST00000393868 PCDHGA4Q9Y5G9 962 aa11.08□□□□□ -0.64
SUCLG1-201ENST00000393868 GPR153Q6NV75 609 aa11.07□□□□□ -0.64
SUCLG1-201ENST00000393868 CAMK2BQ13554 666 aa11.06□□□□□ -0.64
SUCLG1-201ENST00000393868 ARSIQ5FYB1 569 aa11.06□□□□□ -0.64
SUCLG1-201ENST00000393868 OXER1Q8TDS5 423 aa11.06□□□□□ -0.64
SUCLG1-201ENST00000393868 UPF1Q92900 1129 aaKnown RBP eCLIP11.06□□□□□ -0.64
SUCLG1-201ENST00000393868 E2F4Q16254 413 aa11.05□□□□□ -0.64
SUCLG1-201ENST00000393868 NACADO15069 1562 aa11.04□□□□□ -0.64
SUCLG1-201ENST00000393868 EMP3P54852 163 aa11.03□□□□□ -0.64
SUCLG1-201ENST00000393868 VSIG10Q8N0Z9 540 aa11.02□□□□□ -0.65
SUCLG1-201ENST00000393868 MARVELD3Q96A59 401 aa11.02□□□□□ -0.65
SUCLG1-201ENST00000393868 MYO15BQ96JP2 1530 aa11.02□□□□□ -0.65
SUCLG1-201ENST00000393868 EMILIN3Q9NT22 766 aa11.02□□□□□ -0.65
SUCLG1-201ENST00000393868 RB1CC1Q8TDY2 1594 aa11.01□□□□□ -0.65
SUCLG1-201ENST00000393868 ZNF316A6NFI3 1004 aaPredicted RBP11.01□□□□□ -0.65
SUCLG1-201ENST00000393868 NUDT7P0C024 238 aa11□□□□□ -0.65
SUCLG1-201ENST00000393868 MAP3K9P80192 1104 aa11□□□□□ -0.65
SUCLG1-201ENST00000393868 KHSRPQ92945 711 aaKnown RBP eCLIP11□□□□□ -0.656e-7■■■■□ 22.9
SUCLG1-201ENST00000393868 POTEGQ6S5H5 508 aa10.99□□□□□ -0.65
SUCLG1-201ENST00000393868 POTEMA6NI47 508 aa10.98□□□□□ -0.65
SUCLG1-201ENST00000393868 ERBB3P21860 1342 aa10.97□□□□□ -0.65
SUCLG1-201ENST00000393868 P3H3Q8IVL6 736 aa10.97□□□□□ -0.65
SUCLG1-201ENST00000393868 DPYSL4O14531 572 aa10.96□□□□□ -0.65
SUCLG1-201ENST00000393868 KDM2AQ9Y2K7 1162 aa10.96□□□□□ -0.65
SUCLG1-201ENST00000393868 FAM205CA6NFA0 338 aa10.95□□□□□ -0.66
SUCLG1-201ENST00000393868 KDM4FA0A1W2PPD8 638 aa10.94□□□□□ -0.66
SUCLG1-201ENST00000393868 EVI5O60447 810 aa10.94□□□□□ -0.66
SUCLG1-201ENST00000393868 ARIH1Q9Y4X5 557 aaPredicted RBP10.94□□□□□ -0.66
SUCLG1-201ENST00000393868 SCRIBQ14160 1630 aa10.94□□□□□ -0.66
SUCLG1-201ENST00000393868 KCNV2Q8TDN2 545 aa10.93□□□□□ -0.66
SUCLG1-201ENST00000393868 PSDA5PKW4 1024 aaPredicted RBP10.92□□□□□ -0.66
SUCLG1-201ENST00000393868 LHX6Q9UPM6 363 aa10.92□□□□□ -0.66
SUCLG1-201ENST00000393868 VARS2Q5ST30 1063 aaKnown RBP10.91□□□□□ -0.66
SUCLG1-201ENST00000393868 ARHGEF1Q92888 912 aaKnown RBP10.91□□□□□ -0.66
SUCLG1-201ENST00000393868 HS3ST6Q96QI5 342 aa10.91□□□□□ -0.66
SUCLG1-201ENST00000393868 SPDYE16A6NNV3 312 aaPredicted RBP10.9□□□□□ -0.66
SUCLG1-201ENST00000393868 ANO8Q9HCE9 1232 aaPredicted RBP10.9□□□□□ -0.66
SUCLG1-201ENST00000393868 PDIA6Q15084 440 aa10.89□□□□□ -0.67
SUCLG1-201ENST00000393868 POTEB3A0JP26 581 aa10.85□□□□□ -0.67
SUCLG1-201ENST00000393868 SLC24A1O60721 1099 aa10.85□□□□□ -0.67
SUCLG1-201ENST00000393868 PPP4R3BQ5MIZ7 849 aa10.85□□□□□ -0.67
SUCLG1-201ENST00000393868 POTEBQ6S5H4 581 aa10.85□□□□□ -0.67
SUCLG1-201ENST00000393868 JPH4Q96JJ6 628 aa10.84□□□□□ -0.67
SUCLG1-201ENST00000393868 ZNF687Q8N1G0 1237 aa10.83□□□□□ -0.68
SUCLG1-201ENST00000393868 ZNF454Q8N9F8 522 aa10.83□□□□□ -0.68
SUCLG1-201ENST00000393868 FOSBP53539 338 aa10.82□□□□□ -0.68
SUCLG1-201ENST00000393868 PCDH10Q9P2E7 1040 aa10.82□□□□□ -0.68
SUCLG1-201ENST00000393868 PTGER2P43116 358 aa10.81□□□□□ -0.68
SUCLG1-201ENST00000393868 CDAN1Q8IWY9 1227 aa10.81□□□□□ -0.68
SUCLG1-201ENST00000393868 UNC13AQ9UPW8 1703 aa10.81□□□□□ -0.68
SUCLG1-201ENST00000393868 SUPT5HO00267 1087 aaKnown RBP10.81□□□□□ -0.68
SUCLG1-201ENST00000393868 PHF14O94880 888 aa10.8□□□□□ -0.68
SUCLG1-201ENST00000393868 PBX2P40425 430 aa10.78□□□□□ -0.68
SUCLG1-201ENST00000393868 TYW1BQ6NUM6 668 aa10.78□□□□□ -0.68
SUCLG1-201ENST00000393868 DDX12PQ92771 950 aa10.78□□□□□ -0.68
SUCLG1-201ENST00000393868 FBXW7Q969H0 707 aa10.78□□□□□ -0.68
SUCLG1-201ENST00000393868 ZDHHC16Q969W1 377 aa10.78□□□□□ -0.68
SUCLG1-201ENST00000393868 EPAS1Q99814 870 aa10.78□□□□□ -0.68
SUCLG1-201ENST00000393868 PCDHGA10Q9Y5H3 936 aa10.76□□□□□ -0.69
SUCLG1-201ENST00000393868 KCNH8Q96L42 1107 aa10.75□□□□□ -0.69
SUCLG1-201ENST00000393868 GRXCR2A6NFK2 248 aa10.74□□□□□ -0.69
SUCLG1-201ENST00000393868 NBR1Q14596 966 aa10.74□□□□□ -0.69
SUCLG1-201ENST00000393868 BCL2L12Q9HB09 334 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms