RNA–Protein interactions for RNA: ENST00000393400.6

TPRA1-203, Transcript of transmembrane protein adipocyte associated 1, humanhuman

TSL 1 (best)

Gene TPRA1, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRA1-203ENST00000393400 CDC42BPAQ5VT25 1732 aa40.02■■■■■ 4
TPRA1-203ENST00000393400 RRP7BPQ9NSQ0 103 aa40.01■■■■■ 4
TPRA1-203ENST00000393400 ERCC6L2Q5T890 1561 aa40.01■■■■■ 4
TPRA1-203ENST00000393400 CHIC2Q9UKJ5 165 aa40■■■■□ 3.99
TPRA1-203ENST00000393400 ABCC2Q92887 1545 aa40■■■■□ 3.99
TPRA1-203ENST00000393400 ZNF644Q9H582 1327 aaPredicted RBP39.99■■■■□ 3.99
TPRA1-203ENST00000393400 CROCC2H7BZ55 1655 aa39.94■■■■□ 3.98
TPRA1-203ENST00000393400 KDM6BO15054 1643 aa39.93■■■■□ 3.98
TPRA1-203ENST00000393400 SIN3AQ96ST3 1273 aa39.93■■■■□ 3.98
TPRA1-203ENST00000393400 ADGBQ8N7X0 1667 aa39.92■■■■□ 3.98
TPRA1-203ENST00000393400 ADGRL2O95490 1459 aa39.91■■■■□ 3.98
TPRA1-203ENST00000393400 UHRF1BP1LA0JNW5 1464 aa39.89■■■■□ 3.98
TPRA1-203ENST00000393400 SHANK2Q9UPX8 1470 aa39.83■■■■□ 3.97
TPRA1-203ENST00000393400 NEUROD1Q13562 356 aa39.82■■■■□ 3.97
TPRA1-203ENST00000393400 NCOA1Q15788 1441 aa39.81■■■■□ 3.96
TPRA1-203ENST00000393400 PREX2Q70Z35 1606 aa39.8■■■■□ 3.96
TPRA1-203ENST00000393400 DENND4BO75064 1496 aaPredicted RBP39.79■■■■□ 3.96
TPRA1-203ENST00000393400 ARHGEF5Q12774 1597 aa39.76■■■■□ 3.96
TPRA1-203ENST00000393400 ZNF777Q9ULD5 760 aaPredicted RBP39.73■■■■□ 3.95
TPRA1-203ENST00000393400 KDM5BQ9UGL1 1544 aa39.72■■■■□ 3.95
TPRA1-203ENST00000393400 PPP1R15AO75807 674 aaPredicted RBP39.72■■■■□ 3.95
TPRA1-203ENST00000393400 ANKRD30AQ9BXX3 1397 aa39.71■■■■□ 3.95
TPRA1-203ENST00000393400 TRIM52Q96A61 297 aa39.71■■■■□ 3.95
TPRA1-203ENST00000393400 CDC42BPBQ9Y5S2 1711 aa39.71■■■■□ 3.95
TPRA1-203ENST00000393400 TONSLQ96HA7 1378 aa39.69■■■■□ 3.94
TPRA1-203ENST00000393400 MPHOSPH9Q99550 1183 aa39.68■■■■□ 3.94
TPRA1-203ENST00000393400 ZCCHC11Q5TAX3 1644 aaKnown RBP39.68■■■■□ 3.94
TPRA1-203ENST00000393400 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.67■■■■□ 3.94
TPRA1-203ENST00000393400 MBD5Q9P267 1494 aa39.64■■■■□ 3.94
TPRA1-203ENST00000393400 SAMD9LQ8IVG5 1584 aa39.64■■■■□ 3.94
TPRA1-203ENST00000393400 TTC37Q6PGP7 1564 aa39.63■■■■□ 3.94
TPRA1-203ENST00000393400 C9orf84Q5VXU9 1444 aa39.62■■■■□ 3.93
TPRA1-203ENST00000393400 RSPH4AQ5TD94 716 aa39.6■■■■□ 3.93
TPRA1-203ENST00000393400 MYO5CQ9NQX4 1742 aa39.58■■■■□ 3.93
TPRA1-203ENST00000393400 CCDC141Q6ZP82 1450 aa39.56■■■■□ 3.92
TPRA1-203ENST00000393400 PLEKHH2Q8IVE3 1493 aa39.53■■■■□ 3.92
TPRA1-203ENST00000393400 TSPY4P0CV99 314 aa39.52■■■■□ 3.92
TPRA1-203ENST00000393400 TSPY10P0CW01 314 aa39.52■■■■□ 3.92
TPRA1-203ENST00000393400 ANKRD50Q9ULJ7 1429 aa39.52■■■■□ 3.92
TPRA1-203ENST00000393400 PZPP20742 1482 aa39.51■■■■□ 3.92
TPRA1-203ENST00000393400 ARHGAP5Q13017 1502 aa39.5■■■■□ 3.91
TPRA1-203ENST00000393400 ANKRD30BQ9BXX2 1392 aa39.5■■■■□ 3.91
TPRA1-203ENST00000393400 KIAA1107Q9UPP5 1409 aa39.49■■■■□ 3.91
TPRA1-203ENST00000393400 MAST1Q9Y2H9 1570 aa39.49■■■■□ 3.91
TPRA1-203ENST00000393400 HNRNPMP52272 730 aaKnown RBP eCLIP39.44■■■■□ 3.9
TPRA1-203ENST00000393400 PLCH2O75038 1416 aa39.43■■■■□ 3.9
TPRA1-203ENST00000393400 MIER1Q8N108 512 aa39.43■■■■□ 3.9
TPRA1-203ENST00000393400 SLC4A1APQ9BWU0 796 aaKnown RBP39.42■■■■□ 3.9
TPRA1-203ENST00000393400 KDM5DQ9BY66 1539 aa39.42■■■■□ 3.9
TPRA1-203ENST00000393400 RPRD2Q5VT52 1461 aaKnown RBP39.41■■■■□ 3.9
TPRA1-203ENST00000393400 SYCP2Q9BX26 1530 aa39.41■■■■□ 3.9
TPRA1-203ENST00000393400 ARAP3Q8WWN8 1544 aa39.39■■■■□ 3.9
TPRA1-203ENST00000393400 KIF15Q9NS87 1388 aa39.37■■■■□ 3.89
TPRA1-203ENST00000393400 OSCARQ8IYS5 282 aa39.35■■■■□ 3.89
TPRA1-203ENST00000393400 KCNH8Q96L42 1107 aa39.3■■■■□ 3.88
TPRA1-203ENST00000393400 PLXNC1O60486 1568 aa39.3■■■■□ 3.88
TPRA1-203ENST00000393400 WDR7Q9Y4E6 1490 aa39.3■■■■□ 3.88
TPRA1-203ENST00000393400 FOXD1Q16676 465 aa39.28■■■■□ 3.88
TPRA1-203ENST00000393400 EFCAB2Q5VUJ9 269 aa39.26■■■■□ 3.88
TPRA1-203ENST00000393400 ABCC1P33527 1531 aa39.25■■■■□ 3.87
TPRA1-203ENST00000393400 TEX14Q8IWB6 1497 aa39.24■■■■□ 3.87
TPRA1-203ENST00000393400 ARHGEF12Q9NZN5 1544 aa39.22■■■■□ 3.87
TPRA1-203ENST00000393400 NUP155O75694 1391 aa39.2■■■■□ 3.87
TPRA1-203ENST00000393400 L3MBTL2Q969R5 705 aa39.18■■■■□ 3.86
TPRA1-203ENST00000393400 ABCA9Q8IUA7 1624 aa39.18■■■■□ 3.86
TPRA1-203ENST00000393400 CENPBP07199 599 aaPredicted RBP39.15■■■■□ 3.86
TPRA1-203ENST00000393400 PKD2Q13563 968 aa39.15■■■■□ 3.86
TPRA1-203ENST00000393400 UNC13BO14795 1591 aa39.14■■■■□ 3.86
TPRA1-203ENST00000393400 DUOX2Q9NRD8 1548 aa39.12■■■■□ 3.85
TPRA1-203ENST00000393400 ASXL2Q76L83 1435 aa39.06■■■■□ 3.84
TPRA1-203ENST00000393400 ERBINQ96RT1 1412 aa39.06■■■■□ 3.84
TPRA1-203ENST00000393400 FAM135AQ9P2D6 1515 aa39.05■■■■□ 3.84
TPRA1-203ENST00000393400 RTEL1-TNFRSF6BF6WH68 1400 aa39.04■■■■□ 3.84
TPRA1-203ENST00000393400 TRAPPC8Q9Y2L5 1435 aa39.01■■■■□ 3.84
TPRA1-203ENST00000393400 MAGI2Q86UL8 1455 aa38.99■■■■□ 3.83
TPRA1-203ENST00000393400 IQGAP3Q86VI3 1631 aa38.97■■■■□ 3.83
TPRA1-203ENST00000393400 FANCAO15360 1455 aa38.96■■■■□ 3.83
TPRA1-203ENST00000393400 DDX10Q13206 875 aaKnown RBP38.92■■■■□ 3.82
TPRA1-203ENST00000393400 ZFYVE16Q7Z3T8 1539 aa38.92■■■■□ 3.82
TPRA1-203ENST00000393400 NPM1P06748 294 aaKnown RBP eCLIP38.91■■■■□ 3.82
TPRA1-203ENST00000393400 EIF4G2P78344 907 aaKnown RBP eCLIP38.91■■■■□ 3.82
TPRA1-203ENST00000393400 HIRIP3Q9BW71 556 aaPredicted RBP38.9■■■■□ 3.82
TPRA1-203ENST00000393400 NBPF8Q3BBV2 869 aa38.89■■■■□ 3.82
TPRA1-203ENST00000393400 HSPA5P11021 654 aaKnown RBP38.86■■■■□ 3.81
TPRA1-203ENST00000393400 SPAG9O60271 1321 aaKnown RBP38.86■■■■□ 3.81
TPRA1-203ENST00000393400 INO80Q9ULG1 1556 aaPredicted RBP38.85■■■■□ 3.81
TPRA1-203ENST00000393400 UHRF1BP1Q6BDS2 1440 aa38.84■■■■□ 3.81
TPRA1-203ENST00000393400 ADGRL1O94910 1474 aa38.81■■■■□ 3.8
TPRA1-203ENST00000393400 ATP7AQ04656 1500 aa38.78■■■■□ 3.8
TPRA1-203ENST00000393400 ATP10AO60312 1499 aa38.77■■■■□ 3.8
TPRA1-203ENST00000393400 CFAP74Q9C0B2 1584 aa38.77■■■■□ 3.8
TPRA1-203ENST00000393400 SPATA31E1Q6ZUB1 1445 aa38.77■■■■□ 3.8
TPRA1-203ENST00000393400 AFAP1Q8N556 730 aa38.76■■■■□ 3.8
TPRA1-203ENST00000393400 YTHDC1Q96MU7 727 aaKnown RBP38.76■■■■□ 3.8
TPRA1-203ENST00000393400 SCAPERQ9BY12 1400 aa38.75■■■■□ 3.79
TPRA1-203ENST00000393400 DEPDC5O75140 1603 aa38.72■■■■□ 3.79
TPRA1-203ENST00000393400 PLA2R1Q13018 1463 aa38.7■■■■□ 3.79
TPRA1-203ENST00000393400 CCDC144AA2RUR9 1427 aa38.7■■■■□ 3.79
TPRA1-203ENST00000393400 RALGAPBQ86X10 1494 aa38.68■■■■□ 3.78
TPRA1-203ENST00000393400 SCAF1Q9H7N4 1312 aaKnown RBP38.68■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms