RNA–Protein interactions for RNA: ENST00000393330.6

TSPAN8-202, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-202ENST00000393330 SEC24BO95487 1268 aa9.53□□□□□ -0.88
TSPAN8-202ENST00000393330 TAOK2Q9UL54 1235 aa9.53□□□□□ -0.88
TSPAN8-202ENST00000393330 URB2Q14146 1524 aaKnown RBP9.53□□□□□ -0.88
TSPAN8-202ENST00000393330 MKRN3Q13064 507 aaKnown RBP9.52□□□□□ -0.88
TSPAN8-202ENST00000393330 LHX8Q68G74 356 aa9.52□□□□□ -0.88
TSPAN8-202ENST00000393330 IER5LQ5T953 404 aa9.51□□□□□ -0.89
TSPAN8-202ENST00000393330 ERCC6L2Q5T890 1561 aa9.5□□□□□ -0.89
TSPAN8-202ENST00000393330 COLQQ9Y215 455 aaPredicted RBP9.5□□□□□ -0.89
TSPAN8-202ENST00000393330 POTEFA5A3E0 1075 aa9.48□□□□□ -0.89
TSPAN8-202ENST00000393330 STK25O00506 426 aa9.48□□□□□ -0.89
TSPAN8-202ENST00000393330 BCL11BQ9C0K0 894 aaPredicted RBP9.48□□□□□ -0.89
TSPAN8-202ENST00000393330 STK24Q9Y6E0 443 aa9.48□□□□□ -0.89
TSPAN8-202ENST00000393330 POTEB2H3BUK9 544 aa9.47□□□□□ -0.89
TSPAN8-202ENST00000393330 PLCG2P16885 1265 aa9.47□□□□□ -0.89
TSPAN8-202ENST00000393330 CFTRP13569 1480 aa9.46□□□□□ -0.9
TSPAN8-202ENST00000393330 IRX5P78411 483 aaPredicted RBP9.46□□□□□ -0.9
TSPAN8-202ENST00000393330 EFCAB3Q8N7B9 438 aa9.46□□□□□ -0.9
TSPAN8-202ENST00000393330 OCEL1Q9H607 264 aa9.45□□□□□ -0.9
TSPAN8-202ENST00000393330 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.45□□□□□ -0.9
TSPAN8-202ENST00000393330 GAPVD1Q14C86 1478 aa9.42□□□□□ -0.9
TSPAN8-202ENST00000393330 CHGAP10645 457 aaKnown RBP9.41□□□□□ -0.9
TSPAN8-202ENST00000393330 ILDR2Q71H61 639 aa9.41□□□□□ -0.9
TSPAN8-202ENST00000393330 CHMP7Q8WUX9 453 aaPredicted RBP9.41□□□□□ -0.9
TSPAN8-202ENST00000393330 AQRO60306 1485 aaKnown RBP eCLIP9.4□□□□□ -0.9
TSPAN8-202ENST00000393330 CHD1O14646 1710 aa9.4□□□□□ -0.9
TSPAN8-202ENST00000393330 POTEJP0CG39 1038 aa9.4□□□□□ -0.91
TSPAN8-202ENST00000393330 EIF4G3O43432 1585 aaKnown RBP9.39□□□□□ -0.91
TSPAN8-202ENST00000393330 CLASP1Q7Z460 1538 aa9.38□□□□□ -0.91
TSPAN8-202ENST00000393330 MROH2BQ7Z745 1585 aa9.38□□□□□ -0.91
TSPAN8-202ENST00000393330 PDCD7Q8N8D1 485 aaKnown RBP9.38□□□□□ -0.91
TSPAN8-202ENST00000393330 DISP3Q9P2K9 1392 aa9.37□□□□□ -0.91
TSPAN8-202ENST00000393330 HECW2Q9P2P5 1572 aa9.37□□□□□ -0.91
TSPAN8-202ENST00000393330 SOX12O15370 315 aa9.36□□□□□ -0.91
TSPAN8-202ENST00000393330 DPY19L2Q6NUT2 758 aa9.36□□□□□ -0.91
TSPAN8-202ENST00000393330 PHF8Q9UPP1 1060 aa9.36□□□□□ -0.91
TSPAN8-202ENST00000393330 FAM69CQ0P6D2 419 aa9.36□□□□□ -0.91
TSPAN8-202ENST00000393330 SYNJ1O43426 1573 aa9.35□□□□□ -0.91
TSPAN8-202ENST00000393330 SYNJ2O15056 1496 aa9.35□□□□□ -0.91
TSPAN8-202ENST00000393330 HS6ST3Q8IZP7 471 aa9.35□□□□□ -0.91
TSPAN8-202ENST00000393330 OTUD5Q96G74 571 aa9.35□□□□□ -0.91
TSPAN8-202ENST00000393330 ABCC8Q09428 1581 aa9.34□□□□□ -0.91
TSPAN8-202ENST00000393330 MAMSTRQ6ZN01 415 aa9.33□□□□□ -0.92
TSPAN8-202ENST00000393330 SCUBE2Q9NQ36 999 aa9.33□□□□□ -0.92
TSPAN8-202ENST00000393330 L3MBTL3Q96JM7 780 aaPredicted RBP9.32□□□□□ -0.92
TSPAN8-202ENST00000393330 NLRP6P59044 892 aa9.31□□□□□ -0.92
TSPAN8-202ENST00000393330 TOPBP1Q92547 1522 aa9.31□□□□□ -0.92
TSPAN8-202ENST00000393330 MFRPQ9BY79 579 aa9.31□□□□□ -0.92
TSPAN8-202ENST00000393330 G3V3G9 751 aa9.3□□□□□ -0.92
TSPAN8-202ENST00000393330 MS4A4AQ96JQ5 239 aa9.3□□□□□ -0.92
TSPAN8-202ENST00000393330 ADGRL1O94910 1474 aa9.29□□□□□ -0.92
TSPAN8-202ENST00000393330 FBXO22Q8NEZ5 403 aa9.28□□□□□ -0.92
TSPAN8-202ENST00000393330 BOLA1Q9Y3E2 137 aa9.28□□□□□ -0.92
TSPAN8-202ENST00000393330 KDM6BO15054 1643 aa9.27□□□□□ -0.93
TSPAN8-202ENST00000393330 ABCC10Q5T3U5 1492 aa9.27□□□□□ -0.93
TSPAN8-202ENST00000393330 C3orf67Q6ZVT6 689 aa9.26□□□□□ -0.93
TSPAN8-202ENST00000393330 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.26□□□□□ -0.93
TSPAN8-202ENST00000393330 SNAPC4Q5SXM2 1469 aa9.25□□□□□ -0.93
TSPAN8-202ENST00000393330 MAGI1Q96QZ7 1491 aaPredicted RBP9.25□□□□□ -0.93
TSPAN8-202ENST00000393330 TDRD9Q8NDG6 1382 aaKnown RBP9.24□□□□□ -0.93
TSPAN8-202ENST00000393330 NKX1-1Q15270 411 aaPredicted RBP9.24□□□□□ -0.93
TSPAN8-202ENST00000393330 SLAIN1Q8ND83 568 aa9.24□□□□□ -0.93
TSPAN8-202ENST00000393330 KIF13AQ9H1H9 1805 aa9.23□□□□□ -0.93
TSPAN8-202ENST00000393330 TARBP1Q13395 1621 aaKnown RBP9.22□□□□□ -0.93
TSPAN8-202ENST00000393330 MYT1Q01538 1121 aa9.22□□□□□ -0.93
TSPAN8-202ENST00000393330 MICALL2Q8IY33 904 aa9.21□□□□□ -0.94
TSPAN8-202ENST00000393330 PPP1R37O75864 691 aa9.2□□□□□ -0.94
TSPAN8-202ENST00000393330 DNMBPQ6XZF7 1577 aa9.19□□□□□ -0.94
TSPAN8-202ENST00000393330 TMEM121BQ9BXQ6 578 aaPredicted RBP9.19□□□□□ -0.94
TSPAN8-202ENST00000393330 SOGA1O94964 1423 aa9.19□□□□□ -0.94
TSPAN8-202ENST00000393330 GRIN2BQ13224 1484 aa9.18□□□□□ -0.94
TSPAN8-202ENST00000393330 POLA1P09884 1462 aaPredicted RBP9.16□□□□□ -0.94
TSPAN8-202ENST00000393330 WDR97A6NE52 1622 aa9.16□□□□□ -0.94
TSPAN8-202ENST00000393330 RYDENQ9NUL5 291 aaKnown RBP9.15□□□□□ -0.94
TSPAN8-202ENST00000393330 BBXQ8WY36 941 aaPredicted RBP9.15□□□□□ -0.95
TSPAN8-202ENST00000393330 GTPBP6O43824 516 aaPredicted RBP9.14□□□□□ -0.95
TSPAN8-202ENST00000393330 CERKQ8TCT0 537 aa9.14□□□□□ -0.95
TSPAN8-202ENST00000393330 RAD54L2Q9Y4B4 1467 aa9.13□□□□□ -0.95
TSPAN8-202ENST00000393330 MAPKBP1O60336 1514 aa9.13□□□□□ -0.95
TSPAN8-202ENST00000393330 WIZO95785 1651 aa9.13□□□□□ -0.95
TSPAN8-202ENST00000393330 DIP2BQ9P265 1576 aa9.12□□□□□ -0.95
TSPAN8-202ENST00000393330 FAM163AQ96GL9 167 aaPredicted RBP9.12□□□□□ -0.95
TSPAN8-202ENST00000393330 TMEM92Q6UXU6 159 aa9.1□□□□□ -0.95
TSPAN8-202ENST00000393330 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.1□□□□□ -0.95
TSPAN8-202ENST00000393330 TOP2BQ02880 1626 aa9.09□□□□□ -0.95
TSPAN8-202ENST00000393330 CEP170Q5SW79 1584 aa9.09□□□□□ -0.95
TSPAN8-202ENST00000393330 PRDM2Q13029 1718 aa9.07□□□□□ -0.96
TSPAN8-202ENST00000393330 SPATA31D1Q6ZQQ2 1576 aa9.07□□□□□ -0.96
TSPAN8-202ENST00000393330 SNPHO15079 494 aa9.06□□□□□ -0.96
TSPAN8-202ENST00000393330 SPRYD3Q8NCJ5 442 aa9.06□□□□□ -0.96
TSPAN8-202ENST00000393330 CFAP44Q96MT7 982 aa9.06□□□□□ -0.96
TSPAN8-202ENST00000393330 PAXIP1Q6ZW49 1069 aaPredicted RBP9.05□□□□□ -0.96
TSPAN8-202ENST00000393330 TMC2Q8TDI7 906 aa9.05□□□□□ -0.96
TSPAN8-202ENST00000393330 TOP2AP11388 1531 aaKnown RBP9.04□□□□□ -0.96
TSPAN8-202ENST00000393330 C2orf72A6NCS6 295 aa9.04□□□□□ -0.96
TSPAN8-202ENST00000393330 NUP160Q12769 1436 aa9.04□□□□□ -0.96
TSPAN8-202ENST00000393330 PRG4Q92954 1404 aaPredicted RBP9.04□□□□□ -0.96
TSPAN8-202ENST00000393330 TTBK1Q5TCY1 1321 aaPredicted RBP9.03□□□□□ -0.96
TSPAN8-202ENST00000393330 JPH4Q96JJ6 628 aa9.03□□□□□ -0.96
TSPAN8-202ENST00000393330 GRIN2AQ12879 1464 aa9.02□□□□□ -0.97
TSPAN8-202ENST00000393330 TSPOAP1O95153 1857 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms