RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 DAPK1P53355 1430 aa31.45■■■□□ 2.63
SPHK1-202ENST00000392496 GCC2Q8IWJ2 1684 aa31.45■■■□□ 2.63
SPHK1-202ENST00000392496 CAMSAP2Q08AD1 1489 aa31.45■■■□□ 2.63
SPHK1-202ENST00000392496 KDM5BQ9UGL1 1544 aa31.43■■■□□ 2.62
SPHK1-202ENST00000392496 ZNF644Q9H582 1327 aaPredicted RBP31.42■■■□□ 2.62
SPHK1-202ENST00000392496 ABCC5O15440 1437 aa31.42■■■□□ 2.62
SPHK1-202ENST00000392496 NPM1P06748 294 aaKnown RBP eCLIP31.41■■■□□ 2.62
SPHK1-202ENST00000392496 ZCCHC11Q5TAX3 1644 aaKnown RBP31.4■■■□□ 2.62
SPHK1-202ENST00000392496 MAPKBP1O60336 1514 aa31.4■■■□□ 2.62
SPHK1-202ENST00000392496 ROCK1Q13464 1354 aa31.39■■■□□ 2.61
SPHK1-202ENST00000392496 CHIC2Q9UKJ5 165 aa31.35■■■□□ 2.61
SPHK1-202ENST00000392496 PREX2Q70Z35 1606 aa31.32■■■□□ 2.61
SPHK1-202ENST00000392496 RRP7BPQ9NSQ0 103 aa31.32■■■□□ 2.6
SPHK1-202ENST00000392496 CROCC2H7BZ55 1655 aa31.3■■■□□ 2.6
SPHK1-202ENST00000392496 ZNF777Q9ULD5 760 aaPredicted RBP31.29■■■□□ 2.6
SPHK1-202ENST00000392496 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.29■■■□□ 2.6
SPHK1-202ENST00000392496 CDC42BPBQ9Y5S2 1711 aa31.28■■■□□ 2.6
SPHK1-202ENST00000392496 ADGBQ8N7X0 1667 aa31.27■■■□□ 2.6
SPHK1-202ENST00000392496 TTC37Q6PGP7 1564 aa31.27■■■□□ 2.6
SPHK1-202ENST00000392496 ACIN1Q9UKV3 1341 aaKnown RBP31.25■■■□□ 2.59
SPHK1-202ENST00000392496 ADGRL2O95490 1459 aa31.23■■■□□ 2.59
SPHK1-202ENST00000392496 MYO5CQ9NQX4 1742 aa31.21■■■□□ 2.59
SPHK1-202ENST00000392496 ARHGEF5Q12774 1597 aa31.21■■■□□ 2.59
SPHK1-202ENST00000392496 SHANK2Q9UPX8 1470 aa31.21■■■□□ 2.59
SPHK1-202ENST00000392496 KDM6BO15054 1643 aa31.21■■■□□ 2.59
SPHK1-202ENST00000392496 SAMD9LQ8IVG5 1584 aa31.19■■■□□ 2.58
SPHK1-202ENST00000392496 NCOA1Q15788 1441 aa31.16■■■□□ 2.58
SPHK1-202ENST00000392496 ARHGAP5Q13017 1502 aa31.14■■■□□ 2.58
SPHK1-202ENST00000392496 KCNH8Q96L42 1107 aa31.14■■■□□ 2.58
SPHK1-202ENST00000392496 MBD5Q9P267 1494 aa31.13■■■□□ 2.57
SPHK1-202ENST00000392496 ANKRD30AQ9BXX3 1397 aa31.13■■■□□ 2.57
SPHK1-202ENST00000392496 WDR7Q9Y4E6 1490 aa31.11■■■□□ 2.57
SPHK1-202ENST00000392496 RSPH4AQ5TD94 716 aa31.11■■■□□ 2.57
SPHK1-202ENST00000392496 PLCH2O75038 1416 aa31.1■■■□□ 2.57
SPHK1-202ENST00000392496 C9orf84Q5VXU9 1444 aa31.09■■■□□ 2.57
SPHK1-202ENST00000392496 PLEKHH2Q8IVE3 1493 aa31.09■■■□□ 2.57
SPHK1-202ENST00000392496 CCDC141Q6ZP82 1450 aa31.08■■■□□ 2.57
SPHK1-202ENST00000392496 TIMELESSQ9UNS1 1208 aa31.07■■■□□ 2.56
SPHK1-202ENST00000392496 TSPY4P0CV99 314 aa31.06■■■□□ 2.56
SPHK1-202ENST00000392496 TSPY10P0CW01 314 aa31.06■■■□□ 2.56
SPHK1-202ENST00000392496 HNRNPMP52272 730 aaKnown RBP eCLIP31.06■■■□□ 2.56
SPHK1-202ENST00000392496 KIAA1107Q9UPP5 1409 aa31.06■■■□□ 2.56
SPHK1-202ENST00000392496 TRIM52Q96A61 297 aa31.05■■■□□ 2.56
SPHK1-202ENST00000392496 ZNF316A6NFI3 1004 aaPredicted RBP31.05■■■□□ 2.56
SPHK1-202ENST00000392496 SIN3AQ96ST3 1273 aa31.05■■■□□ 2.56
SPHK1-202ENST00000392496 ARAP3Q8WWN8 1544 aa31.04■■■□□ 2.56
SPHK1-202ENST00000392496 SYCP2Q9BX26 1530 aa31.02■■■□□ 2.56
SPHK1-202ENST00000392496 DENND4BO75064 1496 aaPredicted RBP31■■■□□ 2.55
SPHK1-202ENST00000392496 MAST1Q9Y2H9 1570 aa31■■■□□ 2.55
SPHK1-202ENST00000392496 ASXL2Q76L83 1435 aa31■■■□□ 2.55
SPHK1-202ENST00000392496 EFCAB2Q5VUJ9 269 aa30.99■■■□□ 2.55
SPHK1-202ENST00000392496 NEUROD1Q13562 356 aa30.98■■■□□ 2.55
SPHK1-202ENST00000392496 ABCA9Q8IUA7 1624 aa30.98■■■□□ 2.55
SPHK1-202ENST00000392496 MPHOSPH9Q99550 1183 aa30.97■■■□□ 2.55
SPHK1-202ENST00000392496 ANKRD50Q9ULJ7 1429 aa30.96■■■□□ 2.55
SPHK1-202ENST00000392496 ABCC1P33527 1531 aa30.92■■■□□ 2.54
SPHK1-202ENST00000392496 KIF15Q9NS87 1388 aa30.91■■■□□ 2.54
SPHK1-202ENST00000392496 ARHGEF12Q9NZN5 1544 aa30.9■■■□□ 2.54
SPHK1-202ENST00000392496 PZPP20742 1482 aa30.87■■■□□ 2.53
SPHK1-202ENST00000392496 PLXNC1O60486 1568 aa30.85■■■□□ 2.53
SPHK1-202ENST00000392496 TONSLQ96HA7 1378 aa30.84■■■□□ 2.53
SPHK1-202ENST00000392496 TRHP20396 242 aaPredicted RBP30.83■■■□□ 2.53
SPHK1-202ENST00000392496 SLC4A1APQ9BWU0 796 aaKnown RBP30.82■■■□□ 2.52
SPHK1-202ENST00000392496 KDM5DQ9BY66 1539 aa30.81■■■□□ 2.52
SPHK1-202ENST00000392496 FAM69CQ0P6D2 419 aa30.81■■■□□ 2.52
SPHK1-202ENST00000392496 PPP1R15AO75807 674 aaPredicted RBP30.8■■■□□ 2.52
SPHK1-202ENST00000392496 FANCAO15360 1455 aa30.79■■■□□ 2.52
SPHK1-202ENST00000392496 DIEXFQ68CQ4 756 aaKnown RBP30.79■■■□□ 2.52
SPHK1-202ENST00000392496 ANKRD30BQ9BXX2 1392 aa30.78■■■□□ 2.52
SPHK1-202ENST00000392496 TRAPPC8Q9Y2L5 1435 aa30.77■■■□□ 2.52
SPHK1-202ENST00000392496 DIP2BQ9P265 1576 aa30.73■■■□□ 2.51
SPHK1-202ENST00000392496 DUOX2Q9NRD8 1548 aa30.72■■■□□ 2.51
SPHK1-202ENST00000392496 RTEL1-TNFRSF6BF6WH68 1400 aa30.71■■■□□ 2.51
SPHK1-202ENST00000392496 GLI2P10070 1586 aa30.71■■■□□ 2.51
SPHK1-202ENST00000392496 NUP155O75694 1391 aa30.71■■■□□ 2.51
SPHK1-202ENST00000392496 FOXD1Q16676 465 aa30.71■■■□□ 2.51
SPHK1-202ENST00000392496 RPRD2Q5VT52 1461 aaKnown RBP30.68■■■□□ 2.5
SPHK1-202ENST00000392496 UNC13BO14795 1591 aa30.67■■■□□ 2.5
SPHK1-202ENST00000392496 ADGRL1O94910 1474 aa30.67■■■□□ 2.5
SPHK1-202ENST00000392496 ERBINQ96RT1 1412 aa30.66■■■□□ 2.5
SPHK1-202ENST00000392496 CFAP74Q9C0B2 1584 aa30.66■■■□□ 2.5
SPHK1-202ENST00000392496 CD109Q6YHK3 1445 aa30.65■■■□□ 2.5
SPHK1-202ENST00000392496 SPAG9O60271 1321 aaKnown RBP30.65■■■□□ 2.5
SPHK1-202ENST00000392496 ZFYVE16Q7Z3T8 1539 aa30.65■■■□□ 2.5
SPHK1-202ENST00000392496 PKD2Q13563 968 aa30.64■■■□□ 2.49
SPHK1-202ENST00000392496 KIF13AQ9H1H9 1805 aa30.63■■■□□ 2.49
SPHK1-202ENST00000392496 SCAPERQ9BY12 1400 aa30.62■■■□□ 2.49
SPHK1-202ENST00000392496 AFAP1Q8N556 730 aa30.61■■■□□ 2.49
SPHK1-202ENST00000392496 INO80Q9ULG1 1556 aaPredicted RBP30.6■■■□□ 2.49
SPHK1-202ENST00000392496 FAM135AQ9P2D6 1515 aa30.59■■■□□ 2.49
SPHK1-202ENST00000392496 MAP3K4Q9Y6R4 1608 aa30.57■■■□□ 2.48
SPHK1-202ENST00000392496 ATP7AQ04656 1500 aa30.57■■■□□ 2.48
SPHK1-202ENST00000392496 MAGI2Q86UL8 1455 aa30.56■■■□□ 2.48
SPHK1-202ENST00000392496 IQGAP3Q86VI3 1631 aa30.55■■■□□ 2.48
SPHK1-202ENST00000392496 TEX14Q8IWB6 1497 aa30.54■■■□□ 2.48
SPHK1-202ENST00000392496 L3MBTL2Q969R5 705 aa30.51■■■□□ 2.48
SPHK1-202ENST00000392496 ZNF518AQ6AHZ1 1483 aa30.51■■■□□ 2.47
SPHK1-202ENST00000392496 TSPOAP1O95153 1857 aa30.5■■■□□ 2.47
SPHK1-202ENST00000392496 NEO1Q92859 1461 aa30.49■■■□□ 2.47
SPHK1-202ENST00000392496 KDM5CP41229 1560 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms