RNA–Protein interactions for RNA: ENST00000391440.2

RTL8B-201, Transcript of retrotransposon Gag like 8B, humanhuman

APPRIS P1 BASIC

Gene RTL8B, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8B-201ENST00000391440 ABCC5O15440 1437 aa26.07■■□□□ 1.76
RTL8B-201ENST00000391440 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.06■■□□□ 1.76
RTL8B-201ENST00000391440 NPM1P06748 294 aaKnown RBP eCLIP26.04■■□□□ 1.76
RTL8B-201ENST00000391440 TTC37Q6PGP7 1564 aa26.04■■□□□ 1.76
RTL8B-201ENST00000391440 NAIPQ13075 1403 aa26.04■■□□□ 1.76
RTL8B-201ENST00000391440 DNMT1P26358 1616 aaKnown RBP26.02■■□□□ 1.76
RTL8B-201ENST00000391440 WDR7Q9Y4E6 1490 aa25.99■■□□□ 1.75
RTL8B-201ENST00000391440 HNRNPMP52272 730 aaKnown RBP eCLIP25.98■■□□□ 1.75
RTL8B-201ENST00000391440 CYB5RLQ6IPT4 315 aa25.98■■□□□ 1.75
RTL8B-201ENST00000391440 CDC42BPBQ9Y5S2 1711 aa25.98■■□□□ 1.75
RTL8B-201ENST00000391440 PREX2Q70Z35 1606 aa25.97■■□□□ 1.75
RTL8B-201ENST00000391440 ASXL2Q76L83 1435 aa25.96■■□□□ 1.75
RTL8B-201ENST00000391440 ARHGAP5Q13017 1502 aa25.96■■□□□ 1.75
RTL8B-201ENST00000391440 CLSPNQ9HAW4 1339 aa25.94■■□□□ 1.74
RTL8B-201ENST00000391440 AKNAQ7Z591 1439 aa25.94■■□□□ 1.74
RTL8B-201ENST00000391440 ROCK1Q13464 1354 aa25.93■■□□□ 1.74
RTL8B-201ENST00000391440 SAMD9LQ8IVG5 1584 aa25.91■■□□□ 1.74
RTL8B-201ENST00000391440 MYO5CQ9NQX4 1742 aa25.91■■□□□ 1.74
RTL8B-201ENST00000391440 PLCH2O75038 1416 aa25.91■■□□□ 1.74
RTL8B-201ENST00000391440 RIMBP3CA6NJZ7 1639 aa25.9■■□□□ 1.74
RTL8B-201ENST00000391440 RIMBP3BA6NNM3 1639 aa25.9■■□□□ 1.74
RTL8B-201ENST00000391440 RIMBP3Q9UFD9 1639 aa25.9■■□□□ 1.74
RTL8B-201ENST00000391440 TSPY4P0CV99 314 aa25.88■■□□□ 1.73
RTL8B-201ENST00000391440 TSPY10P0CW01 314 aa25.88■■□□□ 1.73
RTL8B-201ENST00000391440 EFCAB2Q5VUJ9 269 aa25.88■■□□□ 1.73
RTL8B-201ENST00000391440 GCC2Q8IWJ2 1684 aa25.88■■□□□ 1.73
RTL8B-201ENST00000391440 MBD5Q9P267 1494 aa25.87■■□□□ 1.73
RTL8B-201ENST00000391440 KDM6BO15054 1643 aa25.86■■□□□ 1.73
RTL8B-201ENST00000391440 TRIM52Q96A61 297 aa25.85■■□□□ 1.73
RTL8B-201ENST00000391440 NCOA1Q15788 1441 aa25.85■■□□□ 1.73
RTL8B-201ENST00000391440 MAPKBP1O60336 1514 aa25.84■■□□□ 1.73
RTL8B-201ENST00000391440 CROCC2H7BZ55 1655 aa25.84■■□□□ 1.73
RTL8B-201ENST00000391440 C9orf84Q5VXU9 1444 aa25.84■■□□□ 1.73
RTL8B-201ENST00000391440 ANKRD30AQ9BXX3 1397 aa25.83■■□□□ 1.73
RTL8B-201ENST00000391440 SYCP2Q9BX26 1530 aa25.83■■□□□ 1.72
RTL8B-201ENST00000391440 RSPH4AQ5TD94 716 aa25.82■■□□□ 1.72
RTL8B-201ENST00000391440 ARHGEF5Q12774 1597 aa25.81■■□□□ 1.72
RTL8B-201ENST00000391440 CCDC141Q6ZP82 1450 aa25.8■■□□□ 1.72
RTL8B-201ENST00000391440 ADGRL2O95490 1459 aa25.8■■□□□ 1.72
RTL8B-201ENST00000391440 SHANK2Q9UPX8 1470 aa25.79■■□□□ 1.72
RTL8B-201ENST00000391440 ADGBQ8N7X0 1667 aa25.78■■□□□ 1.72
RTL8B-201ENST00000391440 KIAA1107Q9UPP5 1409 aa25.78■■□□□ 1.72
RTL8B-201ENST00000391440 PLEKHH2Q8IVE3 1493 aa25.78■■□□□ 1.72
RTL8B-201ENST00000391440 ABCA9Q8IUA7 1624 aa25.77■■□□□ 1.72
RTL8B-201ENST00000391440 ARHGEF12Q9NZN5 1544 aa25.76■■□□□ 1.71
RTL8B-201ENST00000391440 SIN3AQ96ST3 1273 aa25.75■■□□□ 1.71
RTL8B-201ENST00000391440 NEUROD1Q13562 356 aa25.73■■□□□ 1.71
RTL8B-201ENST00000391440 ARAP3Q8WWN8 1544 aa25.72■■□□□ 1.71
RTL8B-201ENST00000391440 FANCAO15360 1455 aa25.72■■□□□ 1.71
RTL8B-201ENST00000391440 KIF15Q9NS87 1388 aa25.7■■□□□ 1.7
RTL8B-201ENST00000391440 ANKRD50Q9ULJ7 1429 aa25.7■■□□□ 1.7
RTL8B-201ENST00000391440 MPHOSPH9Q99550 1183 aa25.7■■□□□ 1.7
RTL8B-201ENST00000391440 ABCC1P33527 1531 aa25.69■■□□□ 1.7
RTL8B-201ENST00000391440 TRAPPC8Q9Y2L5 1435 aa25.68■■□□□ 1.7
RTL8B-201ENST00000391440 CD109Q6YHK3 1445 aa25.68■■□□□ 1.7
RTL8B-201ENST00000391440 AFAP1Q8N556 730 aa25.67■■□□□ 1.7
RTL8B-201ENST00000391440 ACIN1Q9UKV3 1341 aaKnown RBP25.66■■□□□ 1.7
RTL8B-201ENST00000391440 SLC4A1APQ9BWU0 796 aaKnown RBP25.63■■□□□ 1.69
RTL8B-201ENST00000391440 FOXD1Q16676 465 aa25.62■■□□□ 1.69
RTL8B-201ENST00000391440 DENND4BO75064 1496 aaPredicted RBP25.62■■□□□ 1.69
RTL8B-201ENST00000391440 MAST1Q9Y2H9 1570 aa25.61■■□□□ 1.69
RTL8B-201ENST00000391440 SCAPERQ9BY12 1400 aa25.61■■□□□ 1.69
RTL8B-201ENST00000391440 ADGRL1O94910 1474 aa25.61■■□□□ 1.69
RTL8B-201ENST00000391440 SPAG9O60271 1321 aaKnown RBP25.6■■□□□ 1.69
RTL8B-201ENST00000391440 MYT1LQ9UL68 1186 aa25.56■■□□□ 1.68
RTL8B-201ENST00000391440 NUP155O75694 1391 aa25.54■■□□□ 1.68
RTL8B-201ENST00000391440 FAM69CQ0P6D2 419 aa25.54■■□□□ 1.68
RTL8B-201ENST00000391440 PZPP20742 1482 aa25.54■■□□□ 1.68
RTL8B-201ENST00000391440 PLXNC1O60486 1568 aa25.52■■□□□ 1.68
RTL8B-201ENST00000391440 RTEL1-TNFRSF6BF6WH68 1400 aa25.49■■□□□ 1.67
RTL8B-201ENST00000391440 PKD2Q13563 968 aa25.48■■□□□ 1.67
RTL8B-201ENST00000391440 TIMELESSQ9UNS1 1208 aa25.48■■□□□ 1.67
RTL8B-201ENST00000391440 DUOX2Q9NRD8 1548 aa25.48■■□□□ 1.67
RTL8B-201ENST00000391440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.47■■□□□ 1.67
RTL8B-201ENST00000391440 ZFYVE16Q7Z3T8 1539 aa25.47■■□□□ 1.67
RTL8B-201ENST00000391440 TONSLQ96HA7 1378 aa25.47■■□□□ 1.67
RTL8B-201ENST00000391440 CFAP74Q9C0B2 1584 aa25.45■■□□□ 1.67
RTL8B-201ENST00000391440 ANKRD30BQ9BXX2 1392 aa25.45■■□□□ 1.66
RTL8B-201ENST00000391440 GLI2P10070 1586 aa25.44■■□□□ 1.66
RTL8B-201ENST00000391440 MAP3K4Q9Y6R4 1608 aa25.44■■□□□ 1.66
RTL8B-201ENST00000391440 ATP7AQ04656 1500 aa25.43■■□□□ 1.66
RTL8B-201ENST00000391440 ZNF316A6NFI3 1004 aaPredicted RBP25.42■■□□□ 1.66
RTL8B-201ENST00000391440 ZNF518AQ6AHZ1 1483 aa25.42■■□□□ 1.66
RTL8B-201ENST00000391440 ERBINQ96RT1 1412 aa25.42■■□□□ 1.66
RTL8B-201ENST00000391440 NEO1Q92859 1461 aa25.42■■□□□ 1.66
RTL8B-201ENST00000391440 DIP2BQ9P265 1576 aa25.41■■□□□ 1.66
RTL8B-201ENST00000391440 RAPGEF3O95398 923 aa25.41■■□□□ 1.66
RTL8B-201ENST00000391440 PPP1R15AO75807 674 aaPredicted RBP25.4■■□□□ 1.66
RTL8B-201ENST00000391440 POGZQ7Z3K3 1410 aa25.4■■□□□ 1.66
RTL8B-201ENST00000391440 KDM5DQ9BY66 1539 aa25.39■■□□□ 1.66
RTL8B-201ENST00000391440 INO80Q9ULG1 1556 aaPredicted RBP25.39■■□□□ 1.66
RTL8B-201ENST00000391440 FAM135AQ9P2D6 1515 aa25.36■■□□□ 1.65
RTL8B-201ENST00000391440 UNC13BO14795 1591 aa25.34■■□□□ 1.65
RTL8B-201ENST00000391440 KIDINS220Q9ULH0 1771 aa25.32■■□□□ 1.64
RTL8B-201ENST00000391440 DHX29Q7Z478 1369 aaKnown RBP25.32■■□□□ 1.64
RTL8B-201ENST00000391440 TSPOAP1O95153 1857 aa25.31■■□□□ 1.64
RTL8B-201ENST00000391440 KIF3BO15066 747 aa25.31■■□□□ 1.64
RTL8B-201ENST00000391440 KDM5CP41229 1560 aa25.31■■□□□ 1.64
RTL8B-201ENST00000391440 RPRD2Q5VT52 1461 aaKnown RBP25.3■■□□□ 1.64
RTL8B-201ENST00000391440 L3MBTL2Q969R5 705 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms