RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 PHF8Q9UPP1 1060 aa6.66□□□□□ -1.34
RNU6-239P-201ENST00000390990 ANKRD13DQ6ZTN6 518 aa6.65□□□□□ -1.34
RNU6-239P-201ENST00000390990 RNF25Q96BH1 459 aaPredicted RBP6.65□□□□□ -1.34
RNU6-239P-201ENST00000390990 TRIM41Q8WV44 630 aa6.64□□□□□ -1.35
RNU6-239P-201ENST00000390990 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.63□□□□□ -1.35
RNU6-239P-201ENST00000390990 ZFP91Q96JP5 570 aaPredicted RBP6.63□□□□□ -1.35
RNU6-239P-201ENST00000390990 ZNF316A6NFI3 1004 aaPredicted RBP6.62□□□□□ -1.35
RNU6-239P-201ENST00000390990 RIOK3O14730 519 aaKnown RBP6.62□□□□□ -1.35
RNU6-239P-201ENST00000390990 PTGER2P43116 358 aa6.62□□□□□ -1.35
RNU6-239P-201ENST00000390990 LSM11P83369 360 aaKnown RBP eCLIP6.61□□□□□ -1.35
RNU6-239P-201ENST00000390990 VGFO15240 615 aaPredicted RBP6.58□□□□□ -1.36
RNU6-239P-201ENST00000390990 POTEEQ6S8J3 1075 aa6.57□□□□□ -1.36
RNU6-239P-201ENST00000390990 FBXO22Q8NEZ5 403 aa6.57□□□□□ -1.36
RNU6-239P-201ENST00000390990 AXIN2Q9Y2T1 843 aa6.56□□□□□ -1.36
RNU6-239P-201ENST00000390990 KIF3CO14782 793 aa6.55□□□□□ -1.36
RNU6-239P-201ENST00000390990 NUDT7P0C024 238 aa6.55□□□□□ -1.36
RNU6-239P-201ENST00000390990 NLRP6P59044 892 aa6.55□□□□□ -1.36
RNU6-239P-201ENST00000390990 C2orf72A6NCS6 295 aa6.54□□□□□ -1.36
RNU6-239P-201ENST00000390990 LHX6Q9UPM6 363 aa6.54□□□□□ -1.36
RNU6-239P-201ENST00000390990 PBX2P40425 430 aa6.52□□□□□ -1.37
RNU6-239P-201ENST00000390990 MFRPQ9BY79 579 aa6.52□□□□□ -1.37
RNU6-239P-201ENST00000390990 BCL11BQ9C0K0 894 aaPredicted RBP6.52□□□□□ -1.37
RNU6-239P-201ENST00000390990 PLA2G2EQ9NZK7 142 aa6.52□□□□□ -1.37
RNU6-239P-201ENST00000390990 PCDHGA4Q9Y5G9 962 aa6.51□□□□□ -1.37
RNU6-239P-201ENST00000390990 STK24Q9Y6E0 443 aa6.5□□□□□ -1.37
RNU6-239P-201ENST00000390990 SLC34A2O95436 690 aa6.49□□□□□ -1.37
RNU6-239P-201ENST00000390990 HCSTQ9UBK5 93 aa6.49□□□□□ -1.37
RNU6-239P-201ENST00000390990 ADGRD1Q6QNK2 874 aa6.47□□□□□ -1.37
RNU6-239P-201ENST00000390990 ARHGAP33O14559 1287 aa6.45□□□□□ -1.38
RNU6-239P-201ENST00000390990 KDM4FA0A1W2PPD8 638 aa6.44□□□□□ -1.38
RNU6-239P-201ENST00000390990 DMRTA1Q5VZB9 504 aa6.44□□□□□ -1.38
RNU6-239P-201ENST00000390990 TMC2Q8TDI7 906 aa6.44□□□□□ -1.38
RNU6-239P-201ENST00000390990 STK25O00506 426 aa6.43□□□□□ -1.38
RNU6-239P-201ENST00000390990 HRO43593 1189 aa6.43□□□□□ -1.38
RNU6-239P-201ENST00000390990 PPP1R37O75864 691 aa6.42□□□□□ -1.38
RNU6-239P-201ENST00000390990 PSEN2P49810 448 aa6.42□□□□□ -1.38
RNU6-239P-201ENST00000390990 TAOK2Q9UL54 1235 aa6.42□□□□□ -1.38
RNU6-239P-201ENST00000390990 TK2O00142 265 aa6.41□□□□□ -1.38
RNU6-239P-201ENST00000390990 PSDA5PKW4 1024 aaPredicted RBP6.39□□□□□ -1.39
RNU6-239P-201ENST00000390990 KCTD12Q96CX2 325 aaKnown RBP6.39□□□□□ -1.39
RNU6-239P-201ENST00000390990 PTCD2Q8WV60 388 aaKnown RBP6.38□□□□□ -1.39
RNU6-239P-201ENST00000390990 RGL2O15211 777 aa6.35□□□□□ -1.39
RNU6-239P-201ENST00000390990 ECM2O94769 699 aaPredicted RBP6.35□□□□□ -1.39
RNU6-239P-201ENST00000390990 PPP4R3BQ5MIZ7 849 aa6.34□□□□□ -1.39
RNU6-239P-201ENST00000390990 PLPP6Q8IY26 295 aa6.34□□□□□ -1.39
RNU6-239P-201ENST00000390990 PTPN5P54829 565 aa6.33□□□□□ -1.4
RNU6-239P-201ENST00000390990 FOXK1P85037 733 aa6.33□□□□□ -1.4
RNU6-239P-201ENST00000390990 KCNK17Q96T54 332 aa6.33□□□□□ -1.4
RNU6-239P-201ENST00000390990 PKD2Q13563 968 aa6.32□□□□□ -1.4
RNU6-239P-201ENST00000390990 STAC3Q96MF2 364 aa6.32□□□□□ -1.4
RNU6-239P-201ENST00000390990 DSG2Q14126 1118 aa6.31□□□□□ -1.4
RNU6-239P-201ENST00000390990 GPHNQ9NQX3 736 aaPredicted RBP6.31□□□□□ -1.4
RNU6-239P-201ENST00000390990 VPS9D1Q9Y2B5 631 aa6.31□□□□□ -1.4
RNU6-239P-201ENST00000390990 TBC1D12O60347 775 aa6.28□□□□□ -1.4
RNU6-239P-201ENST00000390990 IFFO2Q5TF58 517 aa6.27□□□□□ -1.41
RNU6-239P-201ENST00000390990 BHMG1C9JSJ3 638 aaPredicted RBP6.26□□□□□ -1.41
RNU6-239P-201ENST00000390990 RGS20O76081 388 aa6.26□□□□□ -1.41
RNU6-239P-201ENST00000390990 THSD4Q6ZMP0 1018 aa6.26□□□□□ -1.41
RNU6-239P-201ENST00000390990 OXER1Q8TDS5 423 aa6.26□□□□□ -1.41
RNU6-239P-201ENST00000390990 KCNH8Q96L42 1107 aa6.26□□□□□ -1.41
RNU6-239P-201ENST00000390990 IRX2Q9BZI1 471 aaPredicted RBP6.26□□□□□ -1.41
RNU6-239P-201ENST00000390990 A0A0G2JS52 829 aa6.25□□□□□ -1.41
RNU6-239P-201ENST00000390990 ZNF454Q8N9F8 522 aa6.25□□□□□ -1.41
RNU6-239P-201ENST00000390990 UPF1Q92900 1129 aaKnown RBP eCLIP6.25□□□□□ -1.41
RNU6-239P-201ENST00000390990 SLC4A5Q9BY07 1137 aa6.25□□□□□ -1.41
RNU6-239P-201ENST00000390990 BCL2L12Q9HB09 334 aa6.24□□□□□ -1.41
RNU6-239P-201ENST00000390990 ZBED2Q9BTP6 218 aa6.23□□□□□ -1.41
RNU6-239P-201ENST00000390990 FOSBP53539 338 aa6.22□□□□□ -1.41
RNU6-239P-201ENST00000390990 WNT2BQ93097 391 aa6.22□□□□□ -1.41
RNU6-239P-201ENST00000390990 GOLGA8CPA6NN73 597 aa6.2□□□□□ -1.42
RNU6-239P-201ENST00000390990 PTPREP23469 700 aa6.2□□□□□ -1.42
RNU6-239P-201ENST00000390990 MRPL50Q8N5N7 158 aaKnown RBP6.2□□□□□ -1.42
RNU6-239P-201ENST00000390990 HS6ST3Q8IZP7 471 aa6.19□□□□□ -1.42
RNU6-239P-201ENST00000390990 ADAM33Q9BZ11 813 aa6.19□□□□□ -1.42
RNU6-239P-201ENST00000390990 ANO8Q9HCE9 1232 aaPredicted RBP6.19□□□□□ -1.42
RNU6-239P-201ENST00000390990 CRISPLD2Q9H0B8 497 aa6.18□□□□□ -1.42
RNU6-239P-201ENST00000390990 NKX1-1Q15270 411 aaPredicted RBP6.16□□□□□ -1.42
RNU6-239P-201ENST00000390990 PPP1R15BQ5SWA1 713 aa6.16□□□□□ -1.42
RNU6-239P-201ENST00000390990 ZDHHC16Q969W1 377 aa6.16□□□□□ -1.42
RNU6-239P-201ENST00000390990 JPH4Q96JJ6 628 aa6.16□□□□□ -1.42
RNU6-239P-201ENST00000390990 EVI5O60447 810 aa6.15□□□□□ -1.42
RNU6-239P-201ENST00000390990 NBPF3Q9H094 633 aa6.15□□□□□ -1.42
RNU6-239P-201ENST00000390990 ITGBL1O95965 494 aaPredicted RBP6.14□□□□□ -1.43
RNU6-239P-201ENST00000390990 NCKAP5LQ9HCH0 1330 aa6.14□□□□□ -1.43
RNU6-239P-201ENST00000390990 CHGAP10645 457 aaKnown RBP6.13□□□□□ -1.43
RNU6-239P-201ENST00000390990 PROX2Q3B8N5 592 aa6.13□□□□□ -1.43
RNU6-239P-201ENST00000390990 COL9A1P20849 921 aa6.12□□□□□ -1.43
RNU6-239P-201ENST00000390990 BCAMP50895 628 aa6.12□□□□□ -1.43
RNU6-239P-201ENST00000390990 Q6ZNB5 142 aa6.12□□□□□ -1.43
RNU6-239P-201ENST00000390990 ANKK1Q8NFD2 765 aa6.11□□□□□ -1.43
RNU6-239P-201ENST00000390990 RABGEF1Q9UJ41 708 aa6.11□□□□□ -1.43
RNU6-239P-201ENST00000390990 PPP1R3GB7ZBB8 358 aa6.1□□□□□ -1.43
RNU6-239P-201ENST00000390990 PDE4AP27815 886 aa6.1□□□□□ -1.43
RNU6-239P-201ENST00000390990 PCDHGA10Q9Y5H3 936 aa6.1□□□□□ -1.43
RNU6-239P-201ENST00000390990 SOWAHBA6NEL2 793 aa6.09□□□□□ -1.43
RNU6-239P-201ENST00000390990 DNAJC5Q9H3Z4 198 aa6.09□□□□□ -1.43
RNU6-239P-201ENST00000390990 LCE2BO14633 110 aa6.08□□□□□ -1.44
RNU6-239P-201ENST00000390990 MAP3K9P80192 1104 aa6.08□□□□□ -1.44
RNU6-239P-201ENST00000390990 WBP1LQ9NX94 342 aa6.08□□□□□ -1.44
RNU6-239P-201ENST00000390990 LARP6Q9BRS8 491 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms