RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 ZNF579Q8NAF0 562 aaKnown RBP10.48□□□□□ -0.73
TRAV35-201ENST00000390462 FAM117AQ9C073 453 aa10.48□□□□□ -0.73
TRAV35-201ENST00000390462 RGS22Q8NE09 1264 aa10.47□□□□□ -0.73
TRAV35-201ENST00000390462 PSEN1P49768 467 aa10.46□□□□□ -0.73
TRAV35-201ENST00000390462 RBM26Q5T8P6 1007 aaKnown RBP10.44□□□□□ -0.74
TRAV35-201ENST00000390462 MFRPQ9BY79 579 aa10.44□□□□□ -0.74
TRAV35-201ENST00000390462 ARIH1Q9Y4X5 557 aaPredicted RBP10.44□□□□□ -0.74
TRAV35-201ENST00000390462 IGSF3O75054 1194 aa10.43□□□□□ -0.74
TRAV35-201ENST00000390462 PAK3O75914 559 aaPredicted RBP10.43□□□□□ -0.74
TRAV35-201ENST00000390462 AEBP1Q8IUX7 1158 aa10.43□□□□□ -0.74
TRAV35-201ENST00000390462 CLUAP1Q96AJ1 413 aa10.43□□□□□ -0.74
TRAV35-201ENST00000390462 PLEKHG3A1L390 1219 aa10.42□□□□□ -0.74
TRAV35-201ENST00000390462 ONECUT3O60422 494 aaPredicted RBP10.42□□□□□ -0.74
TRAV35-201ENST00000390462 DDRGK1Q96HY6 314 aa10.42□□□□□ -0.74
TRAV35-201ENST00000390462 MTMR7Q9Y216 660 aa10.41□□□□□ -0.74
TRAV35-201ENST00000390462 TMCO4Q5TGY1 634 aa10.4□□□□□ -0.74
TRAV35-201ENST00000390462 IFNL1Q8IU54 200 aa10.4□□□□□ -0.74
TRAV35-201ENST00000390462 PPP1R37O75864 691 aa10.39□□□□□ -0.75
TRAV35-201ENST00000390462 MAP3K13O43283 966 aa10.38□□□□□ -0.75
TRAV35-201ENST00000390462 KIF12Q96FN5 646 aa10.38□□□□□ -0.75
TRAV35-201ENST00000390462 CHRDL2Q6WN34 429 aa10.37□□□□□ -0.75
TRAV35-201ENST00000390462 PIP4P2Q8N4L2 257 aa10.37□□□□□ -0.75
TRAV35-201ENST00000390462 MLLT3P42568 568 aaPredicted RBP10.34□□□□□ -0.75
TRAV35-201ENST00000390462 MFAP1P55081 439 aaKnown RBP10.34□□□□□ -0.75
TRAV35-201ENST00000390462 EFCAB3Q8N7B9 438 aa10.34□□□□□ -0.75
TRAV35-201ENST00000390462 LARP6Q9BRS8 491 aaKnown RBP10.34□□□□□ -0.75
TRAV35-201ENST00000390462 SERPINA10Q9UK55 444 aa10.34□□□□□ -0.75
TRAV35-201ENST00000390462 NCKAP5LQ9HCH0 1330 aa10.33□□□□□ -0.76
TRAV35-201ENST00000390462 MYT1Q01538 1121 aa10.33□□□□□ -0.76
TRAV35-201ENST00000390462 FBXO22Q8NEZ5 403 aa10.33□□□□□ -0.76
TRAV35-201ENST00000390462 GZF1Q9H116 711 aaPredicted RBP10.33□□□□□ -0.76
TRAV35-201ENST00000390462 GOPCQ9HD26 462 aa10.33□□□□□ -0.76
TRAV35-201ENST00000390462 CABP2Q9NPB3 220 aa10.33□□□□□ -0.76
TRAV35-201ENST00000390462 SOX12O15370 315 aa10.32□□□□□ -0.76
TRAV35-201ENST00000390462 RBM25P49756 843 aaKnown RBP10.32□□□□□ -0.76
TRAV35-201ENST00000390462 NLRP6P59044 892 aa10.32□□□□□ -0.76
TRAV35-201ENST00000390462 CCDC97Q96F63 343 aaPredicted RBP10.32□□□□□ -0.76
TRAV35-201ENST00000390462 ZNF777Q9ULD5 760 aaPredicted RBP10.32□□□□□ -0.76
TRAV35-201ENST00000390462 PDE4AP27815 886 aa10.31□□□□□ -0.76
TRAV35-201ENST00000390462 MFSD10Q14728 455 aa10.31□□□□□ -0.76
TRAV35-201ENST00000390462 FOXD4L5Q5VV16 416 aaPredicted RBP10.31□□□□□ -0.76
TRAV35-201ENST00000390462 FOXD4L4Q8WXT5 416 aaPredicted RBP10.31□□□□□ -0.76
TRAV35-201ENST00000390462 PHF8Q9UPP1 1060 aa10.3□□□□□ -0.76
TRAV35-201ENST00000390462 HMGB1P09429 215 aaKnown RBP10.29□□□□□ -0.76
TRAV35-201ENST00000390462 TTBK1Q5TCY1 1321 aaPredicted RBP10.29□□□□□ -0.76
TRAV35-201ENST00000390462 ZNF428Q96B54 188 aa10.28□□□□□ -0.76
TRAV35-201ENST00000390462 ZRANB1Q9UGI0 708 aa10.28□□□□□ -0.76
TRAV35-201ENST00000390462 NISCHQ9Y2I1 1504 aa10.28□□□□□ -0.76
TRAV35-201ENST00000390462 CAMK2BQ13554 666 aa10.27□□□□□ -0.77
TRAV35-201ENST00000390462 PROSER2Q86WR7 435 aaPredicted RBP10.27□□□□□ -0.77
TRAV35-201ENST00000390462 CD44P16070 742 aaKnown RBP10.26□□□□□ -0.77
TRAV35-201ENST00000390462 MCM6Q14566 821 aa10.26□□□□□ -0.77
TRAV35-201ENST00000390462 RETREG2Q8NC44 543 aa10.26□□□□□ -0.77
TRAV35-201ENST00000390462 DDX27Q96GQ7 796 aaKnown RBP10.25□□□□□ -0.77
TRAV35-201ENST00000390462 MINK1Q8N4C8 1332 aaPredicted RBP10.25□□□□□ -0.77
TRAV35-201ENST00000390462 AMHR2Q16671 573 aa10.24□□□□□ -0.77
TRAV35-201ENST00000390462 PARP9Q8IXQ6 854 aa10.24□□□□□ -0.77
TRAV35-201ENST00000390462 PCMTD1Q96MG8 357 aaPredicted RBP10.24□□□□□ -0.77
TRAV35-201ENST00000390462 PHF12Q96QT6 1004 aa10.24□□□□□ -0.77
TRAV35-201ENST00000390462 E9PSI1 815 aa10.23□□□□□ -0.77
TRAV35-201ENST00000390462 FNBP4Q8N3X1 1017 aaPredicted RBP10.23□□□□□ -0.77
TRAV35-201ENST00000390462 IRF5Q13568 498 aa10.22□□□□□ -0.77
TRAV35-201ENST00000390462 CRISPLD2Q9H0B8 497 aa10.22□□□□□ -0.77
TRAV35-201ENST00000390462 GPR37O15354 613 aa10.21□□□□□ -0.77
TRAV35-201ENST00000390462 CCDC102AQ96A19 550 aa10.2□□□□□ -0.78
TRAV35-201ENST00000390462 MS4A4AQ96JQ5 239 aa10.2□□□□□ -0.78
TRAV35-201ENST00000390462 HSP90B1P14625 803 aaKnown RBP10.19□□□□□ -0.78
TRAV35-201ENST00000390462 FBXW7Q969H0 707 aa10.19□□□□□ -0.78
TRAV35-201ENST00000390462 MAP2K5Q13163 448 aa10.18□□□□□ -0.78
TRAV35-201ENST00000390462 IRF6O14896 467 aa10.17□□□□□ -0.78
TRAV35-201ENST00000390462 CDK11BP21127 795 aaKnown RBP10.17□□□□□ -0.78
TRAV35-201ENST00000390462 GOLGA2Q08379 1002 aa10.17□□□□□ -0.78
TRAV35-201ENST00000390462 TMEM106CQ9BVX2 250 aa10.17□□□□□ -0.78
TRAV35-201ENST00000390462 CDK11AQ9UQ88 783 aaPredicted RBP10.17□□□□□ -0.78
TRAV35-201ENST00000390462 POM121Q96HA1 1249 aa10.15□□□□□ -0.78
TRAV35-201ENST00000390462 MS4A3Q96HJ5 214 aa10.15□□□□□ -0.78
TRAV35-201ENST00000390462 PLSCR2Q9NRY7 297 aa10.15□□□□□ -0.78
TRAV35-201ENST00000390462 PUS7Q96PZ0 661 aaKnown RBP10.14□□□□□ -0.79
TRAV35-201ENST00000390462 TRPC6Q9Y210 931 aa10.14□□□□□ -0.79
TRAV35-201ENST00000390462 PDE4CQ08493 712 aa10.13□□□□□ -0.79
TRAV35-201ENST00000390462 PATL2C9JE40 543 aaKnown RBP10.12□□□□□ -0.79
TRAV35-201ENST00000390462 C19orf67A6NJJ6 358 aa10.11□□□□□ -0.79
TRAV35-201ENST00000390462 SPDYE16A6NNV3 312 aaPredicted RBP10.11□□□□□ -0.79
TRAV35-201ENST00000390462 PPP1R15AO75807 674 aaPredicted RBP10.11□□□□□ -0.79
TRAV35-201ENST00000390462 TTLL12Q14166 644 aaPredicted RBP10.1□□□□□ -0.79
TRAV35-201ENST00000390462 ACIN1Q9UKV3 1341 aaKnown RBP10.08□□□□□ -0.8
TRAV35-201ENST00000390462 EIF5BO60841 1220 aaKnown RBP10.08□□□□□ -0.8
TRAV35-201ENST00000390462 TIE1P35590 1138 aa10.08□□□□□ -0.8
TRAV35-201ENST00000390462 SH3D19Q5HYK7 790 aa10.08□□□□□ -0.8
TRAV35-201ENST00000390462 DPYSL4O14531 572 aa10.06□□□□□ -0.8
TRAV35-201ENST00000390462 MS4A1P11836 297 aa10.06□□□□□ -0.8
TRAV35-201ENST00000390462 PDIA6Q15084 440 aa10.06□□□□□ -0.8
TRAV35-201ENST00000390462 AMOTL2Q9Y2J4 779 aa10.06□□□□□ -0.8
TRAV35-201ENST00000390462 NUTM2FA1L443 756 aa10.05□□□□□ -0.8
TRAV35-201ENST00000390462 TTLL13PA6NNM8 815 aa10.05□□□□□ -0.8
TRAV35-201ENST00000390462 GIGYF2Q6Y7W6 1299 aaKnown RBP10.05□□□□□ -0.8
TRAV35-201ENST00000390462 ILDR1Q86SU0 546 aaPredicted RBP10.05□□□□□ -0.8
TRAV35-201ENST00000390462 COG6Q9Y2V7 657 aa10.05□□□□□ -0.8
TRAV35-201ENST00000390462 ZNF330Q9Y3S2 320 aaPredicted RBP10.05□□□□□ -0.8
TRAV35-201ENST00000390462 GNPATO15228 680 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms