RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 DAPK1P53355 1430 aa18.12■□□□□ 0.49
SPTBN1-203ENST00000389980 RIMBP3CA6NJZ7 1639 aa18.12■□□□□ 0.49
SPTBN1-203ENST00000389980 RIMBP3BA6NNM3 1639 aa18.12■□□□□ 0.49
SPTBN1-203ENST00000389980 DNMT1P26358 1616 aaKnown RBP18.12■□□□□ 0.49
SPTBN1-203ENST00000389980 RIMBP3Q9UFD9 1639 aa18.12■□□□□ 0.49
SPTBN1-203ENST00000389980 ABCC5O15440 1437 aa18.12■□□□□ 0.49
SPTBN1-203ENST00000389980 DHX57Q6P158 1386 aaKnown RBP18.11■□□□□ 0.49
SPTBN1-203ENST00000389980 PREX2Q70Z35 1606 aa18.11■□□□□ 0.49
SPTBN1-203ENST00000389980 CYB5RLQ6IPT4 315 aa18.1■□□□□ 0.49
SPTBN1-203ENST00000389980 WDR7Q9Y4E6 1490 aa18.1■□□□□ 0.49
SPTBN1-203ENST00000389980 HFM1A2PYH4 1435 aa18.1■□□□□ 0.49
SPTBN1-203ENST00000389980 ASXL2Q76L83 1435 aa18.09■□□□□ 0.49
SPTBN1-203ENST00000389980 NAIPQ13075 1403 aa18.08■□□□□ 0.49
SPTBN1-203ENST00000389980 NPM1P06748 294 aaKnown RBP eCLIP18.08■□□□□ 0.49
SPTBN1-203ENST00000389980 MYO5CQ9NQX4 1742 aa18.08■□□□□ 0.49
SPTBN1-203ENST00000389980 ARHGAP5Q13017 1502 aa18.07■□□□□ 0.48
SPTBN1-203ENST00000389980 SAMD9LQ8IVG5 1584 aa18.06■□□□□ 0.48
SPTBN1-203ENST00000389980 HNRNPMP52272 730 aaKnown RBP eCLIP18.06■□□□□ 0.487e-7■■■■□ 21.2
SPTBN1-203ENST00000389980 CROCC2H7BZ55 1655 aa18.02■□□□□ 0.48
SPTBN1-203ENST00000389980 PLCH2O75038 1416 aa18.02■□□□□ 0.48
SPTBN1-203ENST00000389980 AKNAQ7Z591 1439 aa18.02■□□□□ 0.48
SPTBN1-203ENST00000389980 GCC2Q8IWJ2 1684 aa18.02■□□□□ 0.47
SPTBN1-203ENST00000389980 KDM6BO15054 1643 aa18.02■□□□□ 0.47
SPTBN1-203ENST00000389980 MBD5Q9P267 1494 aa18■□□□□ 0.47
SPTBN1-203ENST00000389980 ROCK1Q13464 1354 aa17.99■□□□□ 0.47
SPTBN1-203ENST00000389980 SYCP2Q9BX26 1530 aa17.99■□□□□ 0.47
SPTBN1-203ENST00000389980 ABCA9Q8IUA7 1624 aa17.98■□□□□ 0.47
SPTBN1-203ENST00000389980 ADGBQ8N7X0 1667 aa17.97■□□□□ 0.47
SPTBN1-203ENST00000389980 EFCAB2Q5VUJ9 269 aa17.97■□□□□ 0.47
SPTBN1-203ENST00000389980 ARHGEF5Q12774 1597 aa17.97■□□□□ 0.47
SPTBN1-203ENST00000389980 NCOA1Q15788 1441 aa17.96■□□□□ 0.47
SPTBN1-203ENST00000389980 MAPKBP1O60336 1514 aa17.96■□□□□ 0.47
SPTBN1-203ENST00000389980 C9orf84Q5VXU9 1444 aa17.95■□□□□ 0.46
SPTBN1-203ENST00000389980 ARHGEF12Q9NZN5 1544 aa17.95■□□□□ 0.46
SPTBN1-203ENST00000389980 TSPY4P0CV99 314 aa17.95■□□□□ 0.46
SPTBN1-203ENST00000389980 TSPY10P0CW01 314 aa17.95■□□□□ 0.46
SPTBN1-203ENST00000389980 CCDC141Q6ZP82 1450 aa17.94■□□□□ 0.46
SPTBN1-203ENST00000389980 ADGRL2O95490 1459 aa17.94■□□□□ 0.46
SPTBN1-203ENST00000389980 CLSPNQ9HAW4 1339 aa17.93■□□□□ 0.46
SPTBN1-203ENST00000389980 SHANK2Q9UPX8 1470 aa17.93■□□□□ 0.46
SPTBN1-203ENST00000389980 ANKRD30AQ9BXX3 1397 aa17.93■□□□□ 0.46
SPTBN1-203ENST00000389980 TRIM52Q96A61 297 aa17.92■□□□□ 0.46
SPTBN1-203ENST00000389980 KIAA1107Q9UPP5 1409 aa17.92■□□□□ 0.46
SPTBN1-203ENST00000389980 PLEKHH2Q8IVE3 1493 aa17.91■□□□□ 0.46
SPTBN1-203ENST00000389980 ABCC1P33527 1531 aa17.9■□□□□ 0.46
SPTBN1-203ENST00000389980 ARAP3Q8WWN8 1544 aa17.9■□□□□ 0.46
SPTBN1-203ENST00000389980 PELP1Q8IZL8 1130 aaKnown RBP17.9■□□□□ 0.46
SPTBN1-203ENST00000389980 FANCAO15360 1455 aa17.9■□□□□ 0.46
SPTBN1-203ENST00000389980 RSPH4AQ5TD94 716 aa17.9■□□□□ 0.46
SPTBN1-203ENST00000389980 TRAPPC8Q9Y2L5 1435 aa17.88■□□□□ 0.45
SPTBN1-203ENST00000389980 CD109Q6YHK3 1445 aa17.87■□□□□ 0.45
SPTBN1-203ENST00000389980 SIN3AQ96ST3 1273 aa17.86■□□□□ 0.45
SPTBN1-203ENST00000389980 KIF15Q9NS87 1388 aa17.86■□□□□ 0.45
SPTBN1-203ENST00000389980 ANKRD50Q9ULJ7 1429 aa17.85■□□□□ 0.45
SPTBN1-203ENST00000389980 AFAP1Q8N556 730 aa17.85■□□□□ 0.45
SPTBN1-203ENST00000389980 MAST1Q9Y2H9 1570 aa17.83■□□□□ 0.45
SPTBN1-203ENST00000389980 NEUROD1Q13562 356 aa17.83■□□□□ 0.44
SPTBN1-203ENST00000389980 DENND4BO75064 1496 aaPredicted RBP17.83■□□□□ 0.44
SPTBN1-203ENST00000389980 ADGRL1O94910 1474 aa17.83■□□□□ 0.44
SPTBN1-203ENST00000389980 MPHOSPH9Q99550 1183 aa17.82■□□□□ 0.44
SPTBN1-203ENST00000389980 SCAPERQ9BY12 1400 aa17.82■□□□□ 0.44
SPTBN1-203ENST00000389980 FOXD1Q16676 465 aa17.8■□□□□ 0.44
SPTBN1-203ENST00000389980 SPAG9O60271 1321 aaKnown RBP17.79■□□□□ 0.44
SPTBN1-203ENST00000389980 FAM69CQ0P6D2 419 aa17.77■□□□□ 0.44
SPTBN1-203ENST00000389980 PLXNC1O60486 1568 aa17.77■□□□□ 0.44
SPTBN1-203ENST00000389980 SLC4A1APQ9BWU0 796 aaKnown RBP17.77■□□□□ 0.43
SPTBN1-203ENST00000389980 MAP3K4Q9Y6R4 1608 aa17.77■□□□□ 0.43
SPTBN1-203ENST00000389980 PZPP20742 1482 aa17.76■□□□□ 0.43
SPTBN1-203ENST00000389980 DIP2BQ9P265 1576 aa17.75■□□□□ 0.43
SPTBN1-203ENST00000389980 ZFYVE16Q7Z3T8 1539 aa17.75■□□□□ 0.43
SPTBN1-203ENST00000389980 GLI2P10070 1586 aa17.74■□□□□ 0.43
SPTBN1-203ENST00000389980 CFAP74Q9C0B2 1584 aa17.74■□□□□ 0.43
SPTBN1-203ENST00000389980 MYT1LQ9UL68 1186 aa17.74■□□□□ 0.43
SPTBN1-203ENST00000389980 NUP155O75694 1391 aa17.73■□□□□ 0.43
SPTBN1-203ENST00000389980 TSPOAP1O95153 1857 aa17.73■□□□□ 0.43
SPTBN1-203ENST00000389980 ACIN1Q9UKV3 1341 aaKnown RBP17.73■□□□□ 0.43
SPTBN1-203ENST00000389980 DUOX2Q9NRD8 1548 aa17.72■□□□□ 0.43
SPTBN1-203ENST00000389980 ATP7AQ04656 1500 aa17.71■□□□□ 0.43
SPTBN1-203ENST00000389980 RTEL1-TNFRSF6BF6WH68 1400 aa17.71■□□□□ 0.43
SPTBN1-203ENST00000389980 INO80Q9ULG1 1556 aaPredicted RBP17.71■□□□□ 0.42
SPTBN1-203ENST00000389980 NEO1Q92859 1461 aa17.69■□□□□ 0.42
SPTBN1-203ENST00000389980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.69■□□□□ 0.428e-8■■□□□ 12.4
SPTBN1-203ENST00000389980 ZNF518AQ6AHZ1 1483 aa17.69■□□□□ 0.42
SPTBN1-203ENST00000389980 RAPGEF3O95398 923 aa17.69■□□□□ 0.42
SPTBN1-203ENST00000389980 POGZQ7Z3K3 1410 aa17.68■□□□□ 0.42
SPTBN1-203ENST00000389980 PKD2Q13563 968 aa17.68■□□□□ 0.42
SPTBN1-203ENST00000389980 KIDINS220Q9ULH0 1771 aa17.68■□□□□ 0.42
SPTBN1-203ENST00000389980 ERBINQ96RT1 1412 aa17.67■□□□□ 0.42
SPTBN1-203ENST00000389980 KIF13AQ9H1H9 1805 aa17.66■□□□□ 0.42
SPTBN1-203ENST00000389980 ANKRD30BQ9BXX2 1392 aa17.66■□□□□ 0.42
SPTBN1-203ENST00000389980 KDM5DQ9BY66 1539 aa17.66■□□□□ 0.42
SPTBN1-203ENST00000389980 PPRC1Q5VV67 1664 aaKnown RBP17.65■□□□□ 0.42
SPTBN1-203ENST00000389980 UNC13BO14795 1591 aa17.64■□□□□ 0.42
SPTBN1-203ENST00000389980 KDM5CP41229 1560 aa17.64■□□□□ 0.42
SPTBN1-203ENST00000389980 FAM135AQ9P2D6 1515 aa17.63■□□□□ 0.41
SPTBN1-203ENST00000389980 TONSLQ96HA7 1378 aa17.63■□□□□ 0.41
SPTBN1-203ENST00000389980 TIMELESSQ9UNS1 1208 aa17.61■□□□□ 0.41
SPTBN1-203ENST00000389980 HECW2Q9P2P5 1572 aa17.61■□□□□ 0.41
SPTBN1-203ENST00000389980 RICTORQ6R327 1708 aa17.6■□□□□ 0.41
SPTBN1-203ENST00000389980 DHX29Q7Z478 1369 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms