RNA–Protein interactions for RNA: ENST00000389825.7

GREB1-205, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-205ENST00000389825 PLPPR3Q6T4P5 718 aa24.55■■□□□ 1.52
GREB1-205ENST00000389825 AKNAQ7Z591 1439 aa24.53■■□□□ 1.52
GREB1-205ENST00000389825 CCDC18Q5T9S5 1454 aa24.52■■□□□ 1.52
GREB1-205ENST00000389825 MAP3K1Q13233 1512 aa24.51■■□□□ 1.51
GREB1-205ENST00000389825 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.49■■□□□ 1.51
GREB1-205ENST00000389825 HNRNPUL2Q1KMD3 747 aaKnown RBP24.49■■□□□ 1.51
GREB1-205ENST00000389825 NUP153P49790 1475 aaKnown RBP24.49■■□□□ 1.51
GREB1-205ENST00000389825 TTC37Q6PGP7 1564 aa24.48■■□□□ 1.51
GREB1-205ENST00000389825 ZMYM4Q5VZL5 1548 aa24.48■■□□□ 1.51
GREB1-205ENST00000389825 FER1L4A9Z1Z3 1794 aa24.48■■□□□ 1.51
GREB1-205ENST00000389825 CFAP74Q9C0B2 1584 aa24.48■■□□□ 1.51
GREB1-205ENST00000389825 DMRT2Q9Y5R5 561 aa24.47■■□□□ 1.51
GREB1-205ENST00000389825 SIGLEC1Q9BZZ2 1709 aa24.47■■□□□ 1.51
GREB1-205ENST00000389825 CDK11AQ9UQ88 783 aaPredicted RBP24.46■■□□□ 1.51
GREB1-205ENST00000389825 MAGI2Q86UL8 1455 aa24.45■■□□□ 1.51
GREB1-205ENST00000389825 TIAM1Q13009 1591 aa24.45■■□□□ 1.5
GREB1-205ENST00000389825 SPATA31D1Q6ZQQ2 1576 aa24.45■■□□□ 1.5
GREB1-205ENST00000389825 ZFYVE16Q7Z3T8 1539 aa24.45■■□□□ 1.5
GREB1-205ENST00000389825 YEATS2Q9ULM3 1422 aa24.44■■□□□ 1.5
GREB1-205ENST00000389825 PREX1Q8TCU6 1659 aa24.44■■□□□ 1.5
GREB1-205ENST00000389825 LRRIQ1Q96JM4 1722 aa24.44■■□□□ 1.5
GREB1-205ENST00000389825 MLECQ14165 292 aa24.4■■□□□ 1.5
GREB1-205ENST00000389825 STRCQ7RTU9 1775 aa24.4■■□□□ 1.5
GREB1-205ENST00000389825 CDK13Q14004 1512 aaKnown RBP24.39■■□□□ 1.5
GREB1-205ENST00000389825 PLEKHD1A6NEE1 506 aa24.38■■□□□ 1.49
GREB1-205ENST00000389825 ARHGEF12Q9NZN5 1544 aa24.36■■□□□ 1.49
GREB1-205ENST00000389825 SETD1BQ9UPS6 1966 aaKnown RBP24.36■■□□□ 1.49
GREB1-205ENST00000389825 MTUS2Q5JR59 1369 aa24.35■■□□□ 1.49
GREB1-205ENST00000389825 LRRC9Q6ZRR7 1453 aa24.34■■□□□ 1.49
GREB1-205ENST00000389825 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.34■■□□□ 1.49
GREB1-205ENST00000389825 KANK4Q5T7N3 995 aaPredicted RBP24.31■■□□□ 1.48
GREB1-205ENST00000389825 EHBP1L1Q8N3D4 1523 aa24.3■■□□□ 1.48
GREB1-205ENST00000389825 ATP10AO60312 1499 aa24.3■■□□□ 1.48
GREB1-205ENST00000389825 PPARGC1BQ86YN6 1023 aaKnown RBP24.29■■□□□ 1.48
GREB1-205ENST00000389825 PTPRTO14522 1441 aa24.28■■□□□ 1.48
GREB1-205ENST00000389825 UHRF1BP1Q6BDS2 1440 aa24.28■■□□□ 1.48
GREB1-205ENST00000389825 CEBPAP49715 358 aaPredicted RBP24.28■■□□□ 1.48
GREB1-205ENST00000389825 TROQ12816 1431 aaPredicted RBP24.25■■□□□ 1.47
GREB1-205ENST00000389825 C9orf84Q5VXU9 1444 aa24.25■■□□□ 1.47
GREB1-205ENST00000389825 SCAPERQ9BY12 1400 aa24.25■■□□□ 1.47
GREB1-205ENST00000389825 IQSEC2Q5JU85 1478 aa24.25■■□□□ 1.47
GREB1-205ENST00000389825 SUPT6HQ7KZ85 1726 aaKnown RBP24.23■■□□□ 1.47
GREB1-205ENST00000389825 LTBP4Q8N2S1 1624 aa24.21■■□□□ 1.47
GREB1-205ENST00000389825 PLCH2O75038 1416 aa24.2■■□□□ 1.46
GREB1-205ENST00000389825 KIF14Q15058 1648 aa24.17■■□□□ 1.46
GREB1-205ENST00000389825 NCOA2Q15596 1464 aa24.13■■□□□ 1.45
GREB1-205ENST00000389825 EFCAB2Q5VUJ9 269 aa24.12■■□□□ 1.45
GREB1-205ENST00000389825 C3P01024 1663 aa24.11■■□□□ 1.45
GREB1-205ENST00000389825 ZNF518AQ6AHZ1 1483 aa24.09■■□□□ 1.45
GREB1-205ENST00000389825 CCNB3Q8WWL7 1395 aa24.08■■□□□ 1.45
GREB1-205ENST00000389825 MYO5CQ9NQX4 1742 aa24.08■■□□□ 1.44
GREB1-205ENST00000389825 NCOA1Q15788 1441 aa24.06■■□□□ 1.44
GREB1-205ENST00000389825 TRAPPC8Q9Y2L5 1435 aa24.06■■□□□ 1.44
GREB1-205ENST00000389825 REREQ9P2R6 1566 aa24.06■■□□□ 1.44
GREB1-205ENST00000389825 KDM5CP41229 1560 aa24.05■■□□□ 1.44
GREB1-205ENST00000389825 ITSN2Q9NZM3 1697 aa24.04■■□□□ 1.44
GREB1-205ENST00000389825 MYOM3Q5VTT5 1437 aa24.03■■□□□ 1.44
GREB1-205ENST00000389825 ESF1Q9H501 851 aaKnown RBP24.02■■□□□ 1.44
GREB1-205ENST00000389825 DIP2CQ9Y2E4 1556 aa24.02■■□□□ 1.44
GREB1-205ENST00000389825 AFAP1Q8N556 730 aa24.01■■□□□ 1.43
GREB1-205ENST00000389825 TRIM26Q12899 539 aaPredicted RBP24■■□□□ 1.43
GREB1-205ENST00000389825 AGLP35573 1532 aa23.99■■□□□ 1.43
GREB1-205ENST00000389825 UBAP1LF5GYI3 381 aa23.99■■□□□ 1.43
GREB1-205ENST00000389825 MYT1LQ9UL68 1186 aa23.98■■□□□ 1.43
GREB1-205ENST00000389825 MIA2Q96PC5 1412 aa23.98■■□□□ 1.43
GREB1-205ENST00000389825 CFDP1Q9UEE9 299 aaPredicted RBP23.97■■□□□ 1.43
GREB1-205ENST00000389825 GPATCH8Q9UKJ3 1502 aaKnown RBP23.97■■□□□ 1.43
GREB1-205ENST00000389825 CDC42BPAQ5VT25 1732 aa23.96■■□□□ 1.43
GREB1-205ENST00000389825 MLH3Q9UHC1 1453 aa23.96■■□□□ 1.43
GREB1-205ENST00000389825 FGD6Q6ZV73 1430 aa23.95■■□□□ 1.42
GREB1-205ENST00000389825 CNTLNQ9NXG0 1405 aa23.95■■□□□ 1.42
GREB1-205ENST00000389825 CAMSAP1Q5T5Y3 1602 aa23.95■■□□□ 1.42
GREB1-205ENST00000389825 RRBP1Q9P2E9 1410 aaKnown RBP23.94■■□□□ 1.42
GREB1-205ENST00000389825 ABCA6Q8N139 1617 aa23.94■■□□□ 1.42
GREB1-205ENST00000389825 PREX2Q70Z35 1606 aa23.93■■□□□ 1.42
GREB1-205ENST00000389825 ARHGAP5Q13017 1502 aa23.93■■□□□ 1.42
GREB1-205ENST00000389825 NPATQ14207 1427 aa23.92■■□□□ 1.42
GREB1-205ENST00000389825 ZNF335Q9H4Z2 1342 aaPredicted RBP23.91■■□□□ 1.42
GREB1-205ENST00000389825 CDC42BPBQ9Y5S2 1711 aa23.9■■□□□ 1.42
GREB1-205ENST00000389825 PTPN23Q9H3S7 1636 aa23.9■■□□□ 1.42
GREB1-205ENST00000389825 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.89■■□□□ 1.411e-7■□□□□ 11.2
GREB1-205ENST00000389825 FAM50AQ14320 339 aaKnown RBP23.88■■□□□ 1.41
GREB1-205ENST00000389825 ZNF777Q9ULD5 760 aaPredicted RBP23.87■■□□□ 1.41
GREB1-205ENST00000389825 MROH2AA6NES4 1674 aa23.87■■□□□ 1.41
GREB1-205ENST00000389825 NCKAP5LQ9HCH0 1330 aa23.86■■□□□ 1.41
GREB1-205ENST00000389825 TCOF1Q13428 1488 aaKnown RBP23.85■■□□□ 1.41
GREB1-205ENST00000389825 PKD2Q13563 968 aa23.84■■□□□ 1.41
GREB1-205ENST00000389825 MED1Q15648 1581 aaPredicted RBP23.83■■□□□ 1.41
GREB1-205ENST00000389825 PLA2R1Q13018 1463 aa23.82■■□□□ 1.4
GREB1-205ENST00000389825 CAMSAP2Q08AD1 1489 aa23.81■■□□□ 1.4
GREB1-205ENST00000389825 PLEKHH2Q8IVE3 1493 aa23.81■■□□□ 1.4
GREB1-205ENST00000389825 ZMYM3Q14202 1370 aa23.81■■□□□ 1.4
GREB1-205ENST00000389825 KIDINS220Q9ULH0 1771 aa23.81■■□□□ 1.4
GREB1-205ENST00000389825 ZNF142P52746 1687 aaPredicted RBP23.78■■□□□ 1.4
GREB1-205ENST00000389825 ABCC1P33527 1531 aa23.78■■□□□ 1.4
GREB1-205ENST00000389825 HSPA1LP34931 641 aa23.78■■□□□ 1.4
GREB1-205ENST00000389825 RSPH4AQ5TD94 716 aa23.78■■□□□ 1.4
GREB1-205ENST00000389825 ZNF644Q9H582 1327 aaPredicted RBP23.76■■□□□ 1.39
GREB1-205ENST00000389825 SAMD9LQ8IVG5 1584 aa23.76■■□□□ 1.39
GREB1-205ENST00000389825 PCGF6Q9BYE7 350 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms