RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 SRPK2P78362 688 aaKnown RBP19.72■□□□□ 0.75
ALK-201ENST00000389048 DCAF11Q8TEB1 546 aa19.72■□□□□ 0.75
ALK-201ENST00000389048 TNNT3P45378 269 aaPredicted RBP19.7■□□□□ 0.74
ALK-201ENST00000389048 MFAP1P55081 439 aaKnown RBP19.69■□□□□ 0.74
ALK-201ENST00000389048 STK26Q9P289 416 aa19.69■□□□□ 0.74
ALK-201ENST00000389048 KIAA2012Q0VF49 1180 aa19.69■□□□□ 0.74
ALK-201ENST00000389048 ITPRIPQ8IWB1 547 aa19.69■□□□□ 0.74
ALK-201ENST00000389048 MORC1Q86VD1 984 aa19.67■□□□□ 0.74
ALK-201ENST00000389048 A0A0U1RQG5 324 aaPredicted RBP19.66■□□□□ 0.74
ALK-201ENST00000389048 FBXO3Q9UK99 471 aa19.65■□□□□ 0.74
ALK-201ENST00000389048 CEP162Q5TB80 1403 aa19.65■□□□□ 0.74
ALK-201ENST00000389048 KIAA1211Q6ZU35 1233 aa19.65■□□□□ 0.74
ALK-201ENST00000389048 MS4A1P11836 297 aa19.64■□□□□ 0.74
ALK-201ENST00000389048 FOXD1Q16676 465 aa19.64■□□□□ 0.74
ALK-201ENST00000389048 CHMP4BQ9H444 224 aaKnown RBP19.64■□□□□ 0.73
ALK-201ENST00000389048 RTF1Q92541 710 aaKnown RBP19.63■□□□□ 0.73
ALK-201ENST00000389048 CHMP3Q9Y3E7 222 aa19.63■□□□□ 0.73
ALK-201ENST00000389048 PAK3O75914 559 aaPredicted RBP19.63■□□□□ 0.73
ALK-201ENST00000389048 TMF1P82094 1093 aa19.62■□□□□ 0.73
ALK-201ENST00000389048 RSF1Q96T23 1441 aaPredicted RBP19.61■□□□□ 0.73
ALK-201ENST00000389048 GBP4Q96PP9 640 aa19.6■□□□□ 0.73
ALK-201ENST00000389048 TRIM6-TRIM34B2RNG4 842 aa19.59■□□□□ 0.73
ALK-201ENST00000389048 CCDC9Q9Y3X0 531 aaKnown RBP19.59■□□□□ 0.73
ALK-201ENST00000389048 FOXD4L6Q3SYB3 417 aaPredicted RBP19.58■□□□□ 0.73
ALK-201ENST00000389048 FOXD4L3Q6VB84 417 aaPredicted RBP19.58■□□□□ 0.73
ALK-201ENST00000389048 GOLGA6L3A6NEY3 463 aa19.56■□□□□ 0.72
ALK-201ENST00000389048 PATL2C9JE40 543 aaKnown RBP19.56■□□□□ 0.72
ALK-201ENST00000389048 WWC1Q8IX03 1113 aa19.56■□□□□ 0.72
ALK-201ENST00000389048 HSPA5P11021 654 aaKnown RBP19.56■□□□□ 0.72
ALK-201ENST00000389048 CCDC146Q8IYE0 955 aa19.55■□□□□ 0.72
ALK-201ENST00000389048 CLUAP1Q96AJ1 413 aa19.54■□□□□ 0.72
ALK-201ENST00000389048 RASSF8Q8NHQ8 419 aa19.53■□□□□ 0.72
ALK-201ENST00000389048 SLC4A3P48751 1232 aa19.53■□□□□ 0.72
ALK-201ENST00000389048 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.52■□□□□ 0.72
ALK-201ENST00000389048 SLC4A10Q6U841 1118 aa19.52■□□□□ 0.71
ALK-201ENST00000389048 VSIG10Q8N0Z9 540 aa19.52■□□□□ 0.71
ALK-201ENST00000389048 RCAN3Q9UKA8 241 aa19.52■□□□□ 0.71
ALK-201ENST00000389048 U2AF1L5P0DN76 240 aaPredicted RBP19.51■□□□□ 0.71
ALK-201ENST00000389048 U2AF1Q01081 240 aaKnown RBP eCLIP19.51■□□□□ 0.71
ALK-201ENST00000389048 CSB-PGBD3P0DP91 1061 aa19.51■□□□□ 0.71
ALK-201ENST00000389048 GOLGA3Q08378 1498 aa19.5■□□□□ 0.71
ALK-201ENST00000389048 GORABQ5T7V8 394 aa19.5■□□□□ 0.71
ALK-201ENST00000389048 GOLGA6L1Q8N7Z2 621 aa19.5■□□□□ 0.71
ALK-201ENST00000389048 VPS53Q5VIR6 699 aa19.49■□□□□ 0.71
ALK-201ENST00000389048 PES1O00541 588 aaKnown RBP19.49■□□□□ 0.71
ALK-201ENST00000389048 TPM4P67936 248 aa19.48■□□□□ 0.71
ALK-201ENST00000389048 BCL11BQ9C0K0 894 aaPredicted RBP19.48■□□□□ 0.71
ALK-201ENST00000389048 NUTM2DQ5VT03 806 aaPredicted RBP19.47■□□□□ 0.71
ALK-201ENST00000389048 TOMM22Q9NS69 142 aa19.46■□□□□ 0.71
ALK-201ENST00000389048 CCAR2Q8N163 923 aaKnown RBP19.46■□□□□ 0.71
ALK-201ENST00000389048 TSHZ2Q9NRE2 1034 aa19.45■□□□□ 0.7
ALK-201ENST00000389048 RWDD1Q9H446 243 aaPredicted RBP19.45■□□□□ 0.7
ALK-201ENST00000389048 TAF7LQ5H9L4 462 aa19.44■□□□□ 0.7
ALK-201ENST00000389048 HSP90AA2PQ14568 343 aaPredicted RBP19.44■□□□□ 0.7
ALK-201ENST00000389048 SYAP1Q96A49 352 aaPredicted RBP19.44■□□□□ 0.7
ALK-201ENST00000389048 CCDC180Q9P1Z9 1646 aa19.44■□□□□ 0.7
ALK-201ENST00000389048 TRHP20396 242 aaPredicted RBP19.44■□□□□ 0.7
ALK-201ENST00000389048 CALD1Q05682 793 aaKnown RBP19.44■□□□□ 0.7
ALK-201ENST00000389048 SMC4Q9NTJ3 1288 aa19.44■□□□□ 0.7
ALK-201ENST00000389048 TIMELESSQ9UNS1 1208 aa19.44■□□□□ 0.7
ALK-201ENST00000389048 IPO8O15397 1037 aaKnown RBP19.43■□□□□ 0.7
ALK-201ENST00000389048 KTN1Q86UP2 1357 aaKnown RBP19.42■□□□□ 0.7
ALK-201ENST00000389048 GGT6Q6P531 493 aa19.42■□□□□ 0.7
ALK-201ENST00000389048 HTATSF1O43719 755 aaKnown RBP19.39■□□□□ 0.69
ALK-201ENST00000389048 IPO9Q96P70 1041 aaKnown RBP19.39■□□□□ 0.69
ALK-201ENST00000389048 LTV1Q96GA3 475 aaPredicted RBP19.39■□□□□ 0.69
ALK-201ENST00000389048 EIF4G1Q04637 1599 aaKnown RBP19.39■□□□□ 0.69
ALK-201ENST00000389048 HDGFL2Q7Z4V5 671 aaPredicted RBP19.38■□□□□ 0.69
ALK-201ENST00000389048 ZNF592Q92610 1267 aa19.38■□□□□ 0.69
ALK-201ENST00000389048 NUTM2FA1L443 756 aa19.37■□□□□ 0.69
ALK-201ENST00000389048 RRP7AQ9Y3A4 280 aaKnown RBP19.37■□□□□ 0.69
ALK-201ENST00000389048 PTMSP20962 102 aa19.37■□□□□ 0.69
ALK-201ENST00000389048 CCNB3Q8WWL7 1395 aa19.36■□□□□ 0.69
ALK-201ENST00000389048 G3V3G9 751 aa19.35■□□□□ 0.69
ALK-201ENST00000389048 DCAF8Q5TAQ9 597 aa19.35■□□□□ 0.69
ALK-201ENST00000389048 BAZ1BQ9UIG0 1483 aaKnown RBP19.35■□□□□ 0.69
ALK-201ENST00000389048 MARCH6O60337 910 aa19.35■□□□□ 0.69
ALK-201ENST00000389048 ROCK2O75116 1388 aaKnown RBP19.34■□□□□ 0.69
ALK-201ENST00000389048 TCERG1O14776 1098 aaKnown RBP19.34■□□□□ 0.69
ALK-201ENST00000389048 RILPL2Q969X0 211 aa19.34■□□□□ 0.69
ALK-201ENST00000389048 FBXW7Q969H0 707 aa19.33■□□□□ 0.69
ALK-201ENST00000389048 GPATCH3Q96I76 525 aa19.33■□□□□ 0.69
ALK-201ENST00000389048 PLIN1O60240 522 aa19.33■□□□□ 0.69
ALK-201ENST00000389048 TPM3P06753 285 aa19.33■□□□□ 0.69
ALK-201ENST00000389048 SF3A1Q15459 793 aaKnown RBP19.33■□□□□ 0.69
ALK-201ENST00000389048 PMFBP1Q8TBY8 1022 aa19.33■□□□□ 0.69
ALK-201ENST00000389048 BCL2L13Q9BXK5 485 aa19.33■□□□□ 0.69
ALK-201ENST00000389048 PKD2Q13563 968 aa19.33■□□□□ 0.68
ALK-201ENST00000389048 CFAP44Q96MT7 982 aa19.33■□□□□ 0.68
ALK-201ENST00000389048 STK31Q9BXU1 1019 aa19.32■□□□□ 0.68
ALK-201ENST00000389048 TPD52L1Q16890 204 aaPredicted RBP19.32■□□□□ 0.68
ALK-201ENST00000389048 KANK1Q14678 1352 aa19.32■□□□□ 0.68
ALK-201ENST00000389048 FRAT2O75474 233 aaPredicted RBP19.32■□□□□ 0.68
ALK-201ENST00000389048 CEP89Q96ST8 783 aa19.31■□□□□ 0.68
ALK-201ENST00000389048 RAD21O60216 631 aa19.31■□□□□ 0.68
ALK-201ENST00000389048 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.31■□□□□ 0.68
ALK-201ENST00000389048 CCER2I3L3R5 266 aa19.31■□□□□ 0.68
ALK-201ENST00000389048 ELL2O00472 640 aaPredicted RBP19.3■□□□□ 0.68
ALK-201ENST00000389048 H3BQV1 296 aa19.29■□□□□ 0.68
ALK-201ENST00000389048 IFFO2Q5TF58 517 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms