RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 KRTAP5-7Q6L8G8 165 aa0.46□□□□□ -2.34
RNU6-1340P-201ENST00000384438 ANKRD13DQ6ZTN6 518 aa0.46□□□□□ -2.34
RNU6-1340P-201ENST00000384438 ZNF687Q8N1G0 1237 aa0.46□□□□□ -2.34
RNU6-1340P-201ENST00000384438 ONECUT2O95948 504 aa0.44□□□□□ -2.34
RNU6-1340P-201ENST00000384438 MYT1Q01538 1121 aa0.44□□□□□ -2.34
RNU6-1340P-201ENST00000384438 ATF5Q9Y2D1 282 aaPredicted RBP0.44□□□□□ -2.34
RNU6-1340P-201ENST00000384438 SERINC4A6NH21 518 aa0.43□□□□□ -2.34
RNU6-1340P-201ENST00000384438 LCE1EQ5T753 118 aa0.43□□□□□ -2.34
RNU6-1340P-201ENST00000384438 ERBB3P21860 1342 aa0.42□□□□□ -2.34
RNU6-1340P-201ENST00000384438 TERTO14746 1132 aaKnown RBP0.42□□□□□ -2.34
RNU6-1340P-201ENST00000384438 KRTAP10-6P60371 365 aaPredicted RBP0.42□□□□□ -2.34
RNU6-1340P-201ENST00000384438 MSTNO14793 375 aa0.41□□□□□ -2.34
RNU6-1340P-201ENST00000384438 FARP1Q9Y4F1 1045 aaPredicted RBP0.41□□□□□ -2.34
RNU6-1340P-201ENST00000384438 SPOCK3Q9BQ16 436 aa0.4□□□□□ -2.35
RNU6-1340P-201ENST00000384438 GPR98Q8WXG9 6306 aa0.4□□□□□ -2.35
RNU6-1340P-201ENST00000384438 PROCP04070 461 aa0.39□□□□□ -2.35
RNU6-1340P-201ENST00000384438 ITGB2P05107 769 aa0.39□□□□□ -2.35
RNU6-1340P-201ENST00000384438 GMPRP36959 345 aa0.39□□□□□ -2.35
RNU6-1340P-201ENST00000384438 LSM11P83369 360 aaKnown RBP eCLIP0.39□□□□□ -2.35
RNU6-1340P-201ENST00000384438 VARS2Q5ST30 1063 aaKnown RBP0.39□□□□□ -2.35
RNU6-1340P-201ENST00000384438 HOXB1P14653 301 aaPredicted RBP0.38□□□□□ -2.35
RNU6-1340P-201ENST00000384438 PHF12Q96QT6 1004 aa0.38□□□□□ -2.35
RNU6-1340P-201ENST00000384438 AHNAK2Q8IVF2 5795 aa0.38□□□□□ -2.35
RNU6-1340P-201ENST00000384438 NCANO14594 1321 aa0.38□□□□□ -2.35
RNU6-1340P-201ENST00000384438 RNF225M0QZC1 329 aaPredicted RBP0.37□□□□□ -2.35
RNU6-1340P-201ENST00000384438 SEC24BO95487 1268 aa0.37□□□□□ -2.35
RNU6-1340P-201ENST00000384438 ITGB7P26010 798 aa0.37□□□□□ -2.35
RNU6-1340P-201ENST00000384438 FBLN7Q53RD9 439 aa0.37□□□□□ -2.35
RNU6-1340P-201ENST00000384438 CSRNP1Q96S65 589 aa0.37□□□□□ -2.35
RNU6-1340P-201ENST00000384438 PRRG2O14669 202 aa0.36□□□□□ -2.35
RNU6-1340P-201ENST00000384438 PAX4O43316 350 aa0.36□□□□□ -2.35
RNU6-1340P-201ENST00000384438 IGHA2P01877 340 aa0.36□□□□□ -2.35
RNU6-1340P-201ENST00000384438 HNRNPA0Q13151 305 aaKnown RBP0.36□□□□□ -2.35
RNU6-1340P-201ENST00000384438 MCTP1Q6DN14 999 aa0.36□□□□□ -2.35
RNU6-1340P-201ENST00000384438 MS4A3Q96HJ5 214 aa0.35□□□□□ -2.35
RNU6-1340P-201ENST00000384438 PDZRN3Q9UPQ7 1066 aa0.35□□□□□ -2.35
RNU6-1340P-201ENST00000384438 MUC5ACP98088 5654 aa0.34□□□□□ -2.35
RNU6-1340P-201ENST00000384438 TRIOBPQ9H2D6 2365 aa0.34□□□□□ -2.35
RNU6-1340P-201ENST00000384438 ZNF865P0CJ78 1059 aaPredicted RBP0.34□□□□□ -2.36
RNU6-1340P-201ENST00000384438 CLEC11AQ9Y240 323 aa0.34□□□□□ -2.36
RNU6-1340P-201ENST00000384438 PLA2G4EQ3MJ16 856 aa0.33□□□□□ -2.36
RNU6-1340P-201ENST00000384438 SPDYE1Q8NFV5 336 aaPredicted RBP0.33□□□□□ -2.36
RNU6-1340P-201ENST00000384438 RNF216Q9NWF9 866 aaPredicted RBP0.33□□□□□ -2.36
RNU6-1340P-201ENST00000384438 OVOL3O00110 214 aa0.32□□□□□ -2.36
RNU6-1340P-201ENST00000384438 DGAT1O75907 488 aa0.32□□□□□ -2.36
RNU6-1340P-201ENST00000384438 ZMYM1Q5SVZ6 1142 aa0.32□□□□□ -2.36
RNU6-1340P-201ENST00000384438 ARTNQ5T4W7 220 aa0.32□□□□□ -2.36
RNU6-1340P-201ENST00000384438 COL17A1Q9UMD9 1497 aaPredicted RBP0.31□□□□□ -2.36
RNU6-1340P-201ENST00000384438 HOXB3P14651 431 aaPredicted RBP0.31□□□□□ -2.36
RNU6-1340P-201ENST00000384438 BUD31P41223 144 aaPredicted RBP0.31□□□□□ -2.36
RNU6-1340P-201ENST00000384438 ZFP64Q9NPA5 681 aa0.31□□□□□ -2.36
RNU6-1340P-201ENST00000384438 AAASQ9NRG9 546 aa0.31□□□□□ -2.36
RNU6-1340P-201ENST00000384438 EIF2AK3Q9NZJ5 1116 aaKnown RBP0.31□□□□□ -2.36
RNU6-1340P-201ENST00000384438 C11orf95C9JLR9 678 aaPredicted RBP0.3□□□□□ -2.36
RNU6-1340P-201ENST00000384438 ITGBL1O95965 494 aaPredicted RBP0.3□□□□□ -2.36
RNU6-1340P-201ENST00000384438 FURINP09958 794 aa0.3□□□□□ -2.36
RNU6-1340P-201ENST00000384438 IRS1P35568 1242 aa0.3□□□□□ -2.36
RNU6-1340P-201ENST00000384438 FOXD4L6Q3SYB3 417 aaPredicted RBP0.3□□□□□ -2.36
RNU6-1340P-201ENST00000384438 FOXD4L3Q6VB84 417 aaPredicted RBP0.3□□□□□ -2.36
RNU6-1340P-201ENST00000384438 EMID1Q96A84 441 aaPredicted RBP0.3□□□□□ -2.36
RNU6-1340P-201ENST00000384438 NAF1Q96HR8 494 aaKnown RBP0.3□□□□□ -2.36
RNU6-1340P-201ENST00000384438 BMP2KQ9NSY1 1161 aaPredicted RBP0.3□□□□□ -2.36
RNU6-1340P-201ENST00000384438 SUV39H1O43463 412 aa0.29□□□□□ -2.36
RNU6-1340P-201ENST00000384438 BAG6P46379 1132 aa0.29□□□□□ -2.36
RNU6-1340P-201ENST00000384438 IER5LQ5T953 404 aa0.29□□□□□ -2.36
RNU6-1340P-201ENST00000384438 KANK3Q6NY19 840 aa0.29□□□□□ -2.36
RNU6-1340P-201ENST00000384438 PRKD2Q9BZL6 878 aa0.29□□□□□ -2.36
RNU6-1340P-201ENST00000384438 GMPR2Q9P2T1 348 aaKnown RBP0.29□□□□□ -2.36
RNU6-1340P-201ENST00000384438 ADAMTS8Q9UP79 889 aa0.29□□□□□ -2.36
RNU6-1340P-201ENST00000384438 ST8SIA5O15466 376 aa0.28□□□□□ -2.36
RNU6-1340P-201ENST00000384438 PKDCCQ504Y2 493 aa0.28□□□□□ -2.36
RNU6-1340P-201ENST00000384438 POTEEQ6S8J3 1075 aa0.28□□□□□ -2.36
RNU6-1340P-201ENST00000384438 NBPF11Q86T75 865 aa0.28□□□□□ -2.36
RNU6-1340P-201ENST00000384438 OSCARQ8IYS5 282 aa0.28□□□□□ -2.36
RNU6-1340P-201ENST00000384438 V9GY48 417 aaPredicted RBP0.28□□□□□ -2.36
RNU6-1340P-201ENST00000384438 KMT2DO14686 5537 aa0.27□□□□□ -2.37
RNU6-1340P-201ENST00000384438 SPOCD1Q6ZMY3 1216 aa0.27□□□□□ -2.37
RNU6-1340P-201ENST00000384438 DACH1Q9UI36 760 aa0.27□□□□□ -2.37
RNU6-1340P-201ENST00000384438 MUC19Q7Z5P9 8384 aa0.27□□□□□ -2.37
RNU6-1340P-201ENST00000384438 B8ZZF3 427 aa0.26□□□□□ -2.37
RNU6-1340P-201ENST00000384438 KRTAP4-16G5E9R7 235 aaPredicted RBP0.26□□□□□ -2.37
RNU6-1340P-201ENST00000384438 PTPN5P54829 565 aa0.26□□□□□ -2.37
RNU6-1340P-201ENST00000384438 POLA2Q14181 598 aa0.26□□□□□ -2.37
RNU6-1340P-201ENST00000384438 GALNT6Q8NCL4 622 aa0.26□□□□□ -2.37
RNU6-1340P-201ENST00000384438 TRIM67Q6ZTA4 783 aa0.25□□□□□ -2.37
RNU6-1340P-201ENST00000384438 SLC16A10Q8TF71 515 aa0.25□□□□□ -2.37
RNU6-1340P-201ENST00000384438 IRF7Q92985 503 aa0.25□□□□□ -2.37
RNU6-1340P-201ENST00000384438 HRO43593 1189 aa0.24□□□□□ -2.37
RNU6-1340P-201ENST00000384438 ERBB4Q15303 1308 aa0.23□□□□□ -2.37
RNU6-1340P-201ENST00000384438 SCO2A0A1W2PP80 73 aa0.23□□□□□ -2.37
RNU6-1340P-201ENST00000384438 KRTAP29-1A8MX34 341 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1340P-201ENST00000384438 APLP2Q06481 763 aa0.23□□□□□ -2.37
RNU6-1340P-201ENST00000384438 LCE1CQ5T751 118 aa0.23□□□□□ -2.37
RNU6-1340P-201ENST00000384438 ADGRD1Q6QNK2 874 aa0.23□□□□□ -2.37
RNU6-1340P-201ENST00000384438 DNAJC5GQ8N7S2 189 aa0.23□□□□□ -2.37
RNU6-1340P-201ENST00000384438 KRTAP21-2Q3LI59 83 aa0.22□□□□□ -2.37
RNU6-1340P-201ENST00000384438 LCE1FQ5T754 118 aa0.22□□□□□ -2.37
RNU6-1340P-201ENST00000384438 CRIPAKQ8N1N5 446 aa0.22□□□□□ -2.37
RNU6-1340P-201ENST00000384438 SNRPBP14678 240 aaKnown RBP0.21□□□□□ -2.38
RNU6-1340P-201ENST00000384438 LCE1BQ5T7P3 118 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms