RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 FER1L4A9Z1Z3 1794 aa37.65■■■■□ 3.62
VLDLR-201ENST00000382096 SCAPERQ9BY12 1400 aa37.61■■■■□ 3.61
VLDLR-201ENST00000382096 ARHGAP35Q9NRY4 1499 aa37.59■■■■□ 3.61
VLDLR-201ENST00000382096 KIF14Q15058 1648 aa37.56■■■■□ 3.6
VLDLR-201ENST00000382096 LRRIQ1Q96JM4 1722 aa37.53■■■■□ 3.6
VLDLR-201ENST00000382096 UBTFP17480 764 aaKnown RBP37.52■■■■□ 3.6
VLDLR-201ENST00000382096 ATP10AO60312 1499 aa37.5■■■■□ 3.59
VLDLR-201ENST00000382096 ARHGEF12Q9NZN5 1544 aa37.49■■■■□ 3.59
VLDLR-201ENST00000382096 C9orf84Q5VXU9 1444 aa37.48■■■■□ 3.59
VLDLR-201ENST00000382096 EFCAB2Q5VUJ9 269 aa37.47■■■■□ 3.59
VLDLR-201ENST00000382096 CDK11AQ9UQ88 783 aaPredicted RBP37.47■■■■□ 3.59
VLDLR-201ENST00000382096 ATP1B4Q9UN42 357 aaPredicted RBP37.46■■■■□ 3.59
VLDLR-201ENST00000382096 TROQ12816 1431 aaPredicted RBP37.45■■■■□ 3.59
VLDLR-201ENST00000382096 KDM5CP41229 1560 aa37.44■■■■□ 3.58
VLDLR-201ENST00000382096 HSPA2P54652 639 aa37.44■■■■□ 3.58
VLDLR-201ENST00000382096 ZNF518AQ6AHZ1 1483 aa37.44■■■■□ 3.58
VLDLR-201ENST00000382096 MLECQ14165 292 aa37.43■■■■□ 3.58
VLDLR-201ENST00000382096 EHMT2Q96KQ7 1210 aa37.43■■■■□ 3.58
VLDLR-201ENST00000382096 PLPPR3Q6T4P5 718 aa37.42■■■■□ 3.58
VLDLR-201ENST00000382096 ARHGAP5Q13017 1502 aa37.41■■■■□ 3.58
VLDLR-201ENST00000382096 PREX1Q8TCU6 1659 aa37.41■■■■□ 3.58
VLDLR-201ENST00000382096 CDC42BPBQ9Y5S2 1711 aa37.39■■■■□ 3.58
VLDLR-201ENST00000382096 CLIP1P30622 1438 aa37.38■■■■□ 3.57
VLDLR-201ENST00000382096 DIP2CQ9Y2E4 1556 aa37.32■■■■□ 3.56
VLDLR-201ENST00000382096 REREQ9P2R6 1566 aa37.31■■■■□ 3.56
VLDLR-201ENST00000382096 PREX2Q70Z35 1606 aa37.31■■■■□ 3.56
VLDLR-201ENST00000382096 ABCA6Q8N139 1617 aa37.26■■■■□ 3.56
VLDLR-201ENST00000382096 AFAP1Q8N556 730 aa37.26■■■■□ 3.56
VLDLR-201ENST00000382096 CCDC18Q5T9S5 1454 aa37.24■■■■□ 3.55
VLDLR-201ENST00000382096 ABCC1P33527 1531 aa37.23■■■■□ 3.55
VLDLR-201ENST00000382096 ITSN2Q9NZM3 1697 aa37.23■■■■□ 3.55
VLDLR-201ENST00000382096 SETD1BQ9UPS6 1966 aaKnown RBP37.22■■■■□ 3.55
VLDLR-201ENST00000382096 MLH3Q9UHC1 1453 aa37.22■■■■□ 3.55
VLDLR-201ENST00000382096 CASKIN1Q8WXD9 1431 aa37.2■■■■□ 3.55
VLDLR-201ENST00000382096 STRCQ7RTU9 1775 aa37.19■■■■□ 3.54
VLDLR-201ENST00000382096 CDC42BPAQ5VT25 1732 aa37.19■■■■□ 3.54
VLDLR-201ENST00000382096 CEBPAP49715 358 aaPredicted RBP37.17■■■■□ 3.54
VLDLR-201ENST00000382096 C3P01024 1663 aa37.15■■■■□ 3.54
VLDLR-201ENST00000382096 CERKQ8TCT0 537 aa37.15■■■■□ 3.54
VLDLR-201ENST00000382096 AGLP35573 1532 aa37.15■■■■□ 3.54
VLDLR-201ENST00000382096 TRAPPC8Q9Y2L5 1435 aa37.12■■■■□ 3.53
VLDLR-201ENST00000382096 KIDINS220Q9ULH0 1771 aa37.12■■■■□ 3.53
VLDLR-201ENST00000382096 MYT1LQ9UL68 1186 aa37.11■■■■□ 3.53
VLDLR-201ENST00000382096 UHRF1BP1Q6BDS2 1440 aa37.1■■■■□ 3.53
VLDLR-201ENST00000382096 FYCO1Q9BQS8 1478 aa37.07■■■■□ 3.53
VLDLR-201ENST00000382096 DMRT2Q9Y5R5 561 aa36.99■■■■□ 3.51
VLDLR-201ENST00000382096 SAMD9LQ8IVG5 1584 aa36.99■■■■□ 3.51
VLDLR-201ENST00000382096 MROH2AA6NES4 1674 aa36.94■■■■□ 3.5
VLDLR-201ENST00000382096 CNTLNQ9NXG0 1405 aa36.93■■■■□ 3.5
VLDLR-201ENST00000382096 SYCP2Q9BX26 1530 aa36.93■■■■□ 3.5
VLDLR-201ENST00000382096 ESF1Q9H501 851 aaKnown RBP36.91■■■■□ 3.5
VLDLR-201ENST00000382096 GPATCH8Q9UKJ3 1502 aaKnown RBP36.9■■■■□ 3.5
VLDLR-201ENST00000382096 PTPRTO14522 1441 aa36.89■■■■□ 3.5
VLDLR-201ENST00000382096 SUPT6HQ7KZ85 1726 aaKnown RBP36.86■■■■□ 3.49
VLDLR-201ENST00000382096 INO80Q9ULG1 1556 aaPredicted RBP36.83■■■■□ 3.49
VLDLR-201ENST00000382096 ATP7AQ04656 1500 aa36.82■■■■□ 3.48
VLDLR-201ENST00000382096 ZNF777Q9ULD5 760 aaPredicted RBP36.81■■■■□ 3.48
VLDLR-201ENST00000382096 PLXNC1O60486 1568 aa36.81■■■■□ 3.48
VLDLR-201ENST00000382096 NPATQ14207 1427 aa36.8■■■■□ 3.48
VLDLR-201ENST00000382096 KIAA1107Q9UPP5 1409 aa36.8■■■■□ 3.48
VLDLR-201ENST00000382096 PLEKHH2Q8IVE3 1493 aa36.79■■■■□ 3.48
VLDLR-201ENST00000382096 SPAG9O60271 1321 aaKnown RBP36.79■■■■□ 3.48
VLDLR-201ENST00000382096 NCOA1Q15788 1441 aa36.78■■■■□ 3.48
VLDLR-201ENST00000382096 CLTCQ00610 1675 aaKnown RBP36.75■■■■□ 3.47
VLDLR-201ENST00000382096 LTBP4Q8N2S1 1624 aa36.74■■■■□ 3.47
VLDLR-201ENST00000382096 HNRNPMP52272 730 aaKnown RBP eCLIP36.74■■■■□ 3.47
VLDLR-201ENST00000382096 ZNF142P52746 1687 aaPredicted RBP36.71■■■■□ 3.47
VLDLR-201ENST00000382096 CAMSAP1Q5T5Y3 1602 aa36.71■■■■□ 3.47
VLDLR-201ENST00000382096 ZMYM3Q14202 1370 aa36.7■■■■□ 3.47
VLDLR-201ENST00000382096 CCNB3Q8WWL7 1395 aa36.7■■■■□ 3.47
VLDLR-201ENST00000382096 ADGBQ8N7X0 1667 aa36.7■■■■□ 3.47
VLDLR-201ENST00000382096 A2MP01023 1474 aa36.69■■■■□ 3.46
VLDLR-201ENST00000382096 CFDP1Q9UEE9 299 aaPredicted RBP36.69■■■■□ 3.46
VLDLR-201ENST00000382096 MYO3AQ8NEV4 1616 aa36.68■■■■□ 3.46
VLDLR-201ENST00000382096 IQSEC2Q5JU85 1478 aa36.67■■■■□ 3.46
VLDLR-201ENST00000382096 TIAM1Q13009 1591 aa36.65■■■■□ 3.46
VLDLR-201ENST00000382096 MTUS2Q5JR59 1369 aa36.65■■■■□ 3.46
VLDLR-201ENST00000382096 EHBP1L1Q8N3D4 1523 aa36.59■■■■□ 3.45
VLDLR-201ENST00000382096 CEP170BQ9Y4F5 1589 aaPredicted RBP36.57■■■■□ 3.45
VLDLR-201ENST00000382096 PTPRKQ15262 1439 aa36.57■■■■□ 3.44
VLDLR-201ENST00000382096 PLA2R1Q13018 1463 aa36.56■■■■□ 3.44
VLDLR-201ENST00000382096 MBD5Q9P267 1494 aa36.54■■■■□ 3.44
VLDLR-201ENST00000382096 DISP3Q9P2K9 1392 aa36.51■■■■□ 3.43
VLDLR-201ENST00000382096 PPP6R1Q9UPN7 881 aa36.5■■■■□ 3.43
VLDLR-201ENST00000382096 TCOF1Q13428 1488 aaKnown RBP36.5■■■■□ 3.43
VLDLR-201ENST00000382096 GGT6Q6P531 493 aa36.49■■■■□ 3.43
VLDLR-201ENST00000382096 ZNF644Q9H582 1327 aaPredicted RBP36.49■■■■□ 3.43
VLDLR-201ENST00000382096 RTEL1-TNFRSF6BF6WH68 1400 aa36.49■■■■□ 3.43
VLDLR-201ENST00000382096 CEP162Q5TB80 1403 aa36.49■■■■□ 3.43
VLDLR-201ENST00000382096 NCKAP5LQ9HCH0 1330 aa36.47■■■■□ 3.43
VLDLR-201ENST00000382096 SPATA31D1Q6ZQQ2 1576 aa36.46■■■■□ 3.43
VLDLR-201ENST00000382096 PKD2Q13563 968 aa36.44■■■■□ 3.42
VLDLR-201ENST00000382096 ZNF335Q9H4Z2 1342 aaPredicted RBP36.39■■■■□ 3.42
VLDLR-201ENST00000382096 DNMT1P26358 1616 aaKnown RBP36.39■■■■□ 3.42
VLDLR-201ENST00000382096 DHX29Q7Z478 1369 aaKnown RBP36.39■■■■□ 3.42
VLDLR-201ENST00000382096 A2ML1A8K2U0 1454 aa36.38■■■■□ 3.41
VLDLR-201ENST00000382096 ILDR2Q71H61 639 aa36.38■■■■□ 3.41
VLDLR-201ENST00000382096 FAM135AQ9P2D6 1515 aa36.37■■■■□ 3.41
VLDLR-201ENST00000382096 POLR1AO95602 1720 aaPredicted RBP36.36■■■■□ 3.41
VLDLR-201ENST00000382096 CCDC141Q6ZP82 1450 aa36.36■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms