RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 GZF1Q9H116 711 aaPredicted RBP7.47□□□□□ -1.21
RFC1-202ENST00000381897 WWC1Q8IX03 1113 aa7.46□□□□□ -1.21
RFC1-202ENST00000381897 MSH5O43196 834 aa7.46□□□□□ -1.22
RFC1-202ENST00000381897 CHMP4AQ9BY43 222 aa7.46□□□□□ -1.22
RFC1-202ENST00000381897 RAB3GAP2Q9H2M9 1393 aa7.46□□□□□ -1.22
RFC1-202ENST00000381897 B4GALNT3Q6L9W6 998 aa7.46□□□□□ -1.22
RFC1-202ENST00000381897 FOXD4L5Q5VV16 416 aaPredicted RBP7.45□□□□□ -1.22
RFC1-202ENST00000381897 CNKSR2Q8WXI2 1034 aa7.45□□□□□ -1.22
RFC1-202ENST00000381897 FOXD4L4Q8WXT5 416 aaPredicted RBP7.45□□□□□ -1.22
RFC1-202ENST00000381897 EIF4G2P78344 907 aaKnown RBP eCLIP7.45□□□□□ -1.22
RFC1-202ENST00000381897 KCNH8Q96L42 1107 aa7.45□□□□□ -1.22
RFC1-202ENST00000381897 ZBTB22O15209 634 aa7.45□□□□□ -1.22
RFC1-202ENST00000381897 PAF1Q8N7H5 531 aa7.44□□□□□ -1.22
RFC1-202ENST00000381897 TNNT2P45379 298 aaPredicted RBP7.44□□□□□ -1.22
RFC1-202ENST00000381897 DHX37Q8IY37 1157 aaKnown RBP7.44□□□□□ -1.22
RFC1-202ENST00000381897 SPDYE4A6NLX3 237 aa7.43□□□□□ -1.22
RFC1-202ENST00000381897 PDS5BQ9NTI5 1447 aa7.43□□□□□ -1.22
RFC1-202ENST00000381897 RRBP1Q9P2E9 1410 aaKnown RBP7.43□□□□□ -1.22
RFC1-202ENST00000381897 TCERG1O14776 1098 aaKnown RBP7.43□□□□□ -1.22
RFC1-202ENST00000381897 SMARCA2P51531 1590 aa7.43□□□□□ -1.22
RFC1-202ENST00000381897 PPP1R15AO75807 674 aaPredicted RBP7.43□□□□□ -1.22
RFC1-202ENST00000381897 ANO8Q9HCE9 1232 aaPredicted RBP7.43□□□□□ -1.22
RFC1-202ENST00000381897 TAF7LQ5H9L4 462 aa7.42□□□□□ -1.22
RFC1-202ENST00000381897 UBE2Q2Q8WVN8 375 aa7.41□□□□□ -1.22
RFC1-202ENST00000381897 TRIM44Q96DX7 344 aaPredicted RBP7.41□□□□□ -1.22
RFC1-202ENST00000381897 KDM2AQ9Y2K7 1162 aa7.41□□□□□ -1.22
RFC1-202ENST00000381897 STK25O00506 426 aa7.4□□□□□ -1.22
RFC1-202ENST00000381897 SPOCK2Q92563 424 aa7.4□□□□□ -1.22
RFC1-202ENST00000381897 SIN3AQ96ST3 1273 aa7.4□□□□□ -1.22
RFC1-202ENST00000381897 ZBED9Q6R2W3 1325 aa7.4□□□□□ -1.22
RFC1-202ENST00000381897 HIRIP3Q9BW71 556 aaPredicted RBP7.4□□□□□ -1.22
RFC1-202ENST00000381897 AXDND1Q5T1B0 1012 aaPredicted RBP7.4□□□□□ -1.22
RFC1-202ENST00000381897 L1TD1Q5T7N2 865 aaKnown RBP7.4□□□□□ -1.23
RFC1-202ENST00000381897 DCAF8Q5TAQ9 597 aa7.39□□□□□ -1.23
RFC1-202ENST00000381897 WDR78Q5VTH9 848 aa7.39□□□□□ -1.23
RFC1-202ENST00000381897 FHAD1B1AJZ9 1412 aa7.39□□□□□ -1.23
RFC1-202ENST00000381897 SMARCA4P51532 1647 aa7.38□□□□□ -1.23
RFC1-202ENST00000381897 KIF27Q86VH2 1401 aa7.38□□□□□ -1.23
RFC1-202ENST00000381897 PATL2C9JE40 543 aaKnown RBP7.38□□□□□ -1.23
RFC1-202ENST00000381897 SALL2Q9Y467 1007 aaPredicted RBP7.38□□□□□ -1.23
RFC1-202ENST00000381897 RAPGEF2Q9Y4G8 1499 aa7.38□□□□□ -1.23
RFC1-202ENST00000381897 BECN1Q14457 450 aa7.37□□□□□ -1.23
RFC1-202ENST00000381897 KANK4Q5T7N3 995 aaPredicted RBP7.37□□□□□ -1.23
RFC1-202ENST00000381897 APPP05067 770 aa7.37□□□□□ -1.23
RFC1-202ENST00000381897 GSE1Q14687 1217 aa7.37□□□□□ -1.23
RFC1-202ENST00000381897 TMC1Q8TDI8 760 aa7.37□□□□□ -1.23
RFC1-202ENST00000381897 CUX2O14529 1486 aa7.37□□□□□ -1.23
RFC1-202ENST00000381897 CLSTN1O94985 981 aa7.37□□□□□ -1.23
RFC1-202ENST00000381897 NUDCQ9Y266 331 aa7.37□□□□□ -1.23
RFC1-202ENST00000381897 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.36□□□□□ -1.23
RFC1-202ENST00000381897 MS4A1P11836 297 aa7.36□□□□□ -1.23
RFC1-202ENST00000381897 UPF2Q9HAU5 1272 aaKnown RBP7.36□□□□□ -1.23
RFC1-202ENST00000381897 ERICH3Q5RHP9 1530 aa7.36□□□□□ -1.23
RFC1-202ENST00000381897 EIF4G1Q04637 1599 aaKnown RBP7.36□□□□□ -1.23
RFC1-202ENST00000381897 MYCNP04198 464 aaPredicted RBP7.35□□□□□ -1.23
RFC1-202ENST00000381897 RFX1P22670 979 aa7.35□□□□□ -1.23
RFC1-202ENST00000381897 CHMP7Q8WUX9 453 aaPredicted RBP7.35□□□□□ -1.23
RFC1-202ENST00000381897 TRIM63Q969Q1 353 aa7.35□□□□□ -1.23
RFC1-202ENST00000381897 OS9Q13438 667 aaPredicted RBP7.35□□□□□ -1.23
RFC1-202ENST00000381897 ZMYND15Q9H091 742 aa7.35□□□□□ -1.23
RFC1-202ENST00000381897 ARHGAP35Q9NRY4 1499 aa7.35□□□□□ -1.23
RFC1-202ENST00000381897 ANP32BQ92688 251 aaKnown RBP7.35□□□□□ -1.23
RFC1-202ENST00000381897 AK7Q96M32 723 aa7.35□□□□□ -1.23
RFC1-202ENST00000381897 MEX3CQ5U5Q3 659 aaKnown RBP7.34□□□□□ -1.23
RFC1-202ENST00000381897 NPHP1O15259 732 aa7.34□□□□□ -1.23
RFC1-202ENST00000381897 FOSBP53539 338 aa7.34□□□□□ -1.23
RFC1-202ENST00000381897 PLCD4Q9BRC7 762 aa7.34□□□□□ -1.23
RFC1-202ENST00000381897 TTLL12Q14166 644 aaPredicted RBP7.34□□□□□ -1.24
RFC1-202ENST00000381897 FOXD1Q16676 465 aa7.34□□□□□ -1.24
RFC1-202ENST00000381897 HSP90AA1P07900 732 aaKnown RBP7.33□□□□□ -1.24
RFC1-202ENST00000381897 HSPA5P11021 654 aaKnown RBP7.33□□□□□ -1.24
RFC1-202ENST00000381897 SMYD5Q6GMV2 418 aa7.33□□□□□ -1.24
RFC1-202ENST00000381897 PTMAP06454 111 aaKnown RBP7.32□□□□□ -1.24
RFC1-202ENST00000381897 STK24Q9Y6E0 443 aa7.32□□□□□ -1.24
RFC1-202ENST00000381897 PKNOX2Q96KN3 472 aa7.32□□□□□ -1.24
RFC1-202ENST00000381897 FAM43AQ8N2R8 423 aa7.32□□□□□ -1.24
RFC1-202ENST00000381897 CNTLNQ9NXG0 1405 aa7.32□□□□□ -1.24
RFC1-202ENST00000381897 WDR97A6NE52 1622 aa7.31□□□□□ -1.24
RFC1-202ENST00000381897 IBSPP21815 317 aaPredicted RBP7.31□□□□□ -1.24
RFC1-202ENST00000381897 PPP4R4Q6NUP7 873 aa7.31□□□□□ -1.24
RFC1-202ENST00000381897 ZNF777Q9ULD5 760 aaPredicted RBP7.31□□□□□ -1.24
RFC1-202ENST00000381897 PAK3O75914 559 aaPredicted RBP7.31□□□□□ -1.24
RFC1-202ENST00000381897 GORABQ5T7V8 394 aa7.31□□□□□ -1.24
RFC1-202ENST00000381897 BIN2Q9UBW5 565 aaPredicted RBP7.31□□□□□ -1.24
RFC1-202ENST00000381897 MTUS2Q5JR59 1369 aa7.31□□□□□ -1.24
RFC1-202ENST00000381897 PDE4AP27815 886 aa7.3□□□□□ -1.24
RFC1-202ENST00000381897 C11orf95C9JLR9 678 aaPredicted RBP7.29□□□□□ -1.24
RFC1-202ENST00000381897 ZNF592Q92610 1267 aa7.29□□□□□ -1.24
RFC1-202ENST00000381897 SMG6Q86US8 1419 aaKnown RBP7.29□□□□□ -1.24
RFC1-202ENST00000381897 PNNQ9H307 717 aaKnown RBP7.29□□□□□ -1.24
RFC1-202ENST00000381897 ARAP1Q96P48 1450 aa7.29□□□□□ -1.24
RFC1-202ENST00000381897 UNC13AQ9UPW8 1703 aa7.29□□□□□ -1.24
RFC1-202ENST00000381897 WDR43Q15061 677 aaKnown RBP eCLIP7.29□□□□□ -1.24
RFC1-202ENST00000381897 PRKRIP1Q9H875 184 aaPredicted RBP7.29□□□□□ -1.24
RFC1-202ENST00000381897 CHMP3Q9Y3E7 222 aa7.29□□□□□ -1.24
RFC1-202ENST00000381897 FMN1Q68DA7 1419 aa7.28□□□□□ -1.24
RFC1-202ENST00000381897 PDE3BQ13370 1112 aa7.28□□□□□ -1.24
RFC1-202ENST00000381897 SYNJ1O43426 1573 aa7.28□□□□□ -1.24
RFC1-202ENST00000381897 HSP90AA2PQ14568 343 aaPredicted RBP7.28□□□□□ -1.24
RFC1-202ENST00000381897 ATAD2BQ9ULI0 1458 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms