RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 KDM5BQ9UGL1 1544 aa16.79■□□□□ 0.28
PITRM1-202ENST00000380989 UHRF1BP1LA0JNW5 1464 aa16.78■□□□□ 0.28
PITRM1-202ENST00000380989 RRP7BPQ9NSQ0 103 aa16.78■□□□□ 0.28
PITRM1-202ENST00000380989 RIMBP3CA6NJZ7 1639 aa16.77■□□□□ 0.28
PITRM1-202ENST00000380989 RIMBP3BA6NNM3 1639 aa16.77■□□□□ 0.28
PITRM1-202ENST00000380989 RIMBP3Q9UFD9 1639 aa16.77■□□□□ 0.28
PITRM1-202ENST00000380989 ABCC10Q5T3U5 1492 aa16.77■□□□□ 0.27
PITRM1-202ENST00000380989 TTC37Q6PGP7 1564 aa16.76■□□□□ 0.27
PITRM1-202ENST00000380989 CDC42BPAQ5VT25 1732 aa16.75■□□□□ 0.27
PITRM1-202ENST00000380989 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.74■□□□□ 0.27
PITRM1-202ENST00000380989 RAB3GAP2Q9H2M9 1393 aa16.74■□□□□ 0.27
PITRM1-202ENST00000380989 HNRNPMP52272 730 aaKnown RBP eCLIP16.73■□□□□ 0.27
PITRM1-202ENST00000380989 NPM1P06748 294 aaKnown RBP eCLIP16.73■□□□□ 0.27
PITRM1-202ENST00000380989 ASXL2Q76L83 1435 aa16.72■□□□□ 0.27
PITRM1-202ENST00000380989 MIA2Q96PC5 1412 aa16.72■□□□□ 0.27
PITRM1-202ENST00000380989 CAMSAP2Q08AD1 1489 aa16.72■□□□□ 0.27
PITRM1-202ENST00000380989 TCOF1Q13428 1488 aaKnown RBP16.71■□□□□ 0.27
PITRM1-202ENST00000380989 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.69■□□□□ 0.26
PITRM1-202ENST00000380989 CDC42BPBQ9Y5S2 1711 aa16.68■□□□□ 0.26
PITRM1-202ENST00000380989 WDR7Q9Y4E6 1490 aa16.68■□□□□ 0.26
PITRM1-202ENST00000380989 ABCC5O15440 1437 aa16.68■□□□□ 0.26
PITRM1-202ENST00000380989 SETD5Q9C0A6 1442 aa16.68■□□□□ 0.26
PITRM1-202ENST00000380989 ITSN2Q9NZM3 1697 aa16.67■□□□□ 0.26
PITRM1-202ENST00000380989 BCL11AQ9H165 835 aa16.67■□□□□ 0.26
PITRM1-202ENST00000380989 DAPK1P53355 1430 aa16.67■□□□□ 0.26
PITRM1-202ENST00000380989 ARHGAP5Q13017 1502 aa16.66■□□□□ 0.26
PITRM1-202ENST00000380989 DHX57Q6P158 1386 aaKnown RBP16.63■□□□□ 0.25
PITRM1-202ENST00000380989 SAMD9LQ8IVG5 1584 aa16.63■□□□□ 0.25
PITRM1-202ENST00000380989 HIRIP3Q9BW71 556 aaPredicted RBP16.63■□□□□ 0.25
PITRM1-202ENST00000380989 KDM6BO15054 1643 aa16.63■□□□□ 0.25
PITRM1-202ENST00000380989 PREX2Q70Z35 1606 aa16.63■□□□□ 0.25
PITRM1-202ENST00000380989 ANP32EQ9BTT0 268 aa16.62■□□□□ 0.25
PITRM1-202ENST00000380989 NAIPQ13075 1403 aa16.62■□□□□ 0.25
PITRM1-202ENST00000380989 DNMT1P26358 1616 aaKnown RBP16.61■□□□□ 0.25
PITRM1-202ENST00000380989 MYO5CQ9NQX4 1742 aa16.61■□□□□ 0.25
PITRM1-202ENST00000380989 SYCP2Q9BX26 1530 aa16.59■□□□□ 0.25
PITRM1-202ENST00000380989 HFM1A2PYH4 1435 aa16.59■□□□□ 0.25
PITRM1-202ENST00000380989 PLCH2O75038 1416 aa16.58■□□□□ 0.25
PITRM1-202ENST00000380989 ARHGEF12Q9NZN5 1544 aa16.58■□□□□ 0.24
PITRM1-202ENST00000380989 FKBP8Q14318 412 aa16.57■□□□□ 0.24
PITRM1-202ENST00000380989 MBD5Q9P267 1494 aa16.57■□□□□ 0.24
PITRM1-202ENST00000380989 AFAP1Q8N556 730 aa16.56■□□□□ 0.24
PITRM1-202ENST00000380989 TRIM52Q96A61 297 aa16.56■□□□□ 0.24
PITRM1-202ENST00000380989 EFCAB2Q5VUJ9 269 aa16.56■□□□□ 0.24
PITRM1-202ENST00000380989 TSPY4P0CV99 314 aa16.54■□□□□ 0.24
PITRM1-202ENST00000380989 TSPY10P0CW01 314 aa16.54■□□□□ 0.24
PITRM1-202ENST00000380989 AKNAQ7Z591 1439 aa16.54■□□□□ 0.24
PITRM1-202ENST00000380989 FOXD1Q16676 465 aa16.53■□□□□ 0.24
PITRM1-202ENST00000380989 C9orf84Q5VXU9 1444 aa16.53■□□□□ 0.24
PITRM1-202ENST00000380989 TRAPPC8Q9Y2L5 1435 aa16.53■□□□□ 0.24
PITRM1-202ENST00000380989 NCOA1Q15788 1441 aa16.52■□□□□ 0.24
PITRM1-202ENST00000380989 ABCA9Q8IUA7 1624 aa16.52■□□□□ 0.23
PITRM1-202ENST00000380989 SIN3AQ96ST3 1273 aa16.52■□□□□ 0.23
PITRM1-202ENST00000380989 FANCAO15360 1455 aa16.52■□□□□ 0.23
PITRM1-202ENST00000380989 FAM69CQ0P6D2 419 aa16.51■□□□□ 0.23
PITRM1-202ENST00000380989 CD109Q6YHK3 1445 aa16.51■□□□□ 0.23
PITRM1-202ENST00000380989 CROCC2H7BZ55 1655 aa16.51■□□□□ 0.23
PITRM1-202ENST00000380989 CCDC141Q6ZP82 1450 aa16.49■□□□□ 0.23
PITRM1-202ENST00000380989 MYT1LQ9UL68 1186 aa16.49■□□□□ 0.23
PITRM1-202ENST00000380989 MAPKBP1O60336 1514 aa16.49■□□□□ 0.23
PITRM1-202ENST00000380989 GCC2Q8IWJ2 1684 aa16.48■□□□□ 0.23
PITRM1-202ENST00000380989 DDX10Q13206 875 aaKnown RBP16.47■□□□□ 0.23
PITRM1-202ENST00000380989 ROCK1Q13464 1354 aa16.47■□□□□ 0.23
PITRM1-202ENST00000380989 ANKRD30AQ9BXX3 1397 aa16.47■□□□□ 0.23
PITRM1-202ENST00000380989 ABCC1P33527 1531 aa16.46■□□□□ 0.23
PITRM1-202ENST00000380989 SCAPERQ9BY12 1400 aa16.46■□□□□ 0.23
PITRM1-202ENST00000380989 KIF15Q9NS87 1388 aa16.46■□□□□ 0.22
PITRM1-202ENST00000380989 ADGRL1O94910 1474 aa16.45■□□□□ 0.22
PITRM1-202ENST00000380989 ARHGEF5Q12774 1597 aa16.45■□□□□ 0.22
PITRM1-202ENST00000380989 RAPGEF3O95398 923 aa16.44■□□□□ 0.22
PITRM1-202ENST00000380989 ADGBQ8N7X0 1667 aa16.44■□□□□ 0.22
PITRM1-202ENST00000380989 IRX6P78412 446 aaPredicted RBP16.44■□□□□ 0.22
PITRM1-202ENST00000380989 TSPOAP1O95153 1857 aa16.44■□□□□ 0.22
PITRM1-202ENST00000380989 ANKRD50Q9ULJ7 1429 aa16.43■□□□□ 0.22
PITRM1-202ENST00000380989 KIAA1107Q9UPP5 1409 aa16.43■□□□□ 0.22
PITRM1-202ENST00000380989 ADGRL2O95490 1459 aa16.42■□□□□ 0.22
PITRM1-202ENST00000380989 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.42■□□□□ 0.226e-6■■■□□ 19.2
PITRM1-202ENST00000380989 DENND4BO75064 1496 aaPredicted RBP16.42■□□□□ 0.22
PITRM1-202ENST00000380989 MPHOSPH9Q99550 1183 aa16.42■□□□□ 0.22
PITRM1-202ENST00000380989 SPAG9O60271 1321 aaKnown RBP16.41■□□□□ 0.22
PITRM1-202ENST00000380989 RBM19Q9Y4C8 960 aaKnown RBP16.4■□□□□ 0.22
PITRM1-202ENST00000380989 SHANK2Q9UPX8 1470 aa16.4■□□□□ 0.22
PITRM1-202ENST00000380989 PLEKHH2Q8IVE3 1493 aa16.39■□□□□ 0.21
PITRM1-202ENST00000380989 RSPH4AQ5TD94 716 aa16.39■□□□□ 0.21
PITRM1-202ENST00000380989 SLC4A1APQ9BWU0 796 aaKnown RBP16.39■□□□□ 0.21
PITRM1-202ENST00000380989 DIP2BQ9P265 1576 aa16.39■□□□□ 0.21
PITRM1-202ENST00000380989 ARAP3Q8WWN8 1544 aa16.37■□□□□ 0.21
PITRM1-202ENST00000380989 MSH5O43196 834 aa16.36■□□□□ 0.21
PITRM1-202ENST00000380989 MAP3K4Q9Y6R4 1608 aa16.35■□□□□ 0.21
PITRM1-202ENST00000380989 NUP155O75694 1391 aa16.35■□□□□ 0.21
PITRM1-202ENST00000380989 ZFYVE16Q7Z3T8 1539 aa16.33■□□□□ 0.2
PITRM1-202ENST00000380989 PZPP20742 1482 aa16.32■□□□□ 0.2
PITRM1-202ENST00000380989 PKD2Q13563 968 aa16.32■□□□□ 0.2
PITRM1-202ENST00000380989 MAST1Q9Y2H9 1570 aa16.31■□□□□ 0.2
PITRM1-202ENST00000380989 CLSPNQ9HAW4 1339 aa16.31■□□□□ 0.2
PITRM1-202ENST00000380989 DNAJC5Q9H3Z4 198 aa16.31■□□□□ 0.2
PITRM1-202ENST00000380989 KIF13AQ9H1H9 1805 aa16.3■□□□□ 0.2
PITRM1-202ENST00000380989 TRHP20396 242 aaPredicted RBP16.3■□□□□ 0.2
PITRM1-202ENST00000380989 ATP7AQ04656 1500 aa16.3■□□□□ 0.2
PITRM1-202ENST00000380989 POGZQ7Z3K3 1410 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms