RNA–Protein interactions for RNA: ENST00000380568.7

GCOM1-201, Transcript of GRINL1A complex locus 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene GCOM1, Length 1,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-201ENST00000380568 DAPK1P53355 1430 aa28.33■■■□□ 2.13
GCOM1-201ENST00000380568 PREX2Q70Z35 1606 aa28.32■■■□□ 2.12
GCOM1-201ENST00000380568 NAIPQ13075 1403 aa28.29■■■□□ 2.12
GCOM1-201ENST00000380568 ABCC5O15440 1437 aa28.26■■■□□ 2.11
GCOM1-201ENST00000380568 SHANK2Q9UPX8 1470 aa28.24■■■□□ 2.11
GCOM1-201ENST00000380568 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.24■■■□□ 2.11
GCOM1-201ENST00000380568 CROCC2H7BZ55 1655 aa28.24■■■□□ 2.11
GCOM1-201ENST00000380568 ARHGEF5Q12774 1597 aa28.22■■■□□ 2.11
GCOM1-201ENST00000380568 MYO5CQ9NQX4 1742 aa28.22■■■□□ 2.11
GCOM1-201ENST00000380568 ADGRL2O95490 1459 aa28.21■■■□□ 2.11
GCOM1-201ENST00000380568 PLEKHH2Q8IVE3 1493 aa28.21■■■□□ 2.11
GCOM1-201ENST00000380568 ADGBQ8N7X0 1667 aa28.21■■■□□ 2.11
GCOM1-201ENST00000380568 ARAP3Q8WWN8 1544 aa28.2■■■□□ 2.11
GCOM1-201ENST00000380568 TTC37Q6PGP7 1564 aa28.2■■■□□ 2.1
GCOM1-201ENST00000380568 WDR7Q9Y4E6 1490 aa28.19■■■□□ 2.1
GCOM1-201ENST00000380568 RSPH4AQ5TD94 716 aa28.19■■■□□ 2.1
GCOM1-201ENST00000380568 CDC42BPBQ9Y5S2 1711 aa28.18■■■□□ 2.1
GCOM1-201ENST00000380568 ZNF644Q9H582 1327 aaPredicted RBP28.15■■■□□ 2.1
GCOM1-201ENST00000380568 ARHGAP5Q13017 1502 aa28.13■■■□□ 2.09
GCOM1-201ENST00000380568 KIAA1107Q9UPP5 1409 aa28.13■■■□□ 2.09
GCOM1-201ENST00000380568 SAMD9LQ8IVG5 1584 aa28.12■■■□□ 2.09
GCOM1-201ENST00000380568 PLCH2O75038 1416 aa28.12■■■□□ 2.09
GCOM1-201ENST00000380568 MAPKBP1O60336 1514 aa28.11■■■□□ 2.09
GCOM1-201ENST00000380568 ANKRD30AQ9BXX3 1397 aa28.1■■■□□ 2.09
GCOM1-201ENST00000380568 ZNF777Q9ULD5 760 aaPredicted RBP28.1■■■□□ 2.09
GCOM1-201ENST00000380568 CCDC141Q6ZP82 1450 aa28.09■■■□□ 2.09
GCOM1-201ENST00000380568 NPM1P06748 294 aaKnown RBP eCLIP28.08■■■□□ 2.09
GCOM1-201ENST00000380568 MBD5Q9P267 1494 aa28.08■■■□□ 2.09
GCOM1-201ENST00000380568 NCOA1Q15788 1441 aa28.07■■■□□ 2.08
GCOM1-201ENST00000380568 ABCA9Q8IUA7 1624 aa28.07■■■□□ 2.08
GCOM1-201ENST00000380568 CHIC2Q9UKJ5 165 aa28.07■■■□□ 2.08
GCOM1-201ENST00000380568 RRP7BPQ9NSQ0 103 aa28.05■■■□□ 2.08
GCOM1-201ENST00000380568 MAST1Q9Y2H9 1570 aa28.05■■■□□ 2.08
GCOM1-201ENST00000380568 C9orf84Q5VXU9 1444 aa28.04■■■□□ 2.08
GCOM1-201ENST00000380568 ASXL2Q76L83 1435 aa28.04■■■□□ 2.08
GCOM1-201ENST00000380568 TSPY4P0CV99 314 aa28.03■■■□□ 2.08
GCOM1-201ENST00000380568 TSPY10P0CW01 314 aa28.03■■■□□ 2.08
GCOM1-201ENST00000380568 EFCAB2Q5VUJ9 269 aa28.02■■■□□ 2.08
GCOM1-201ENST00000380568 TIMELESSQ9UNS1 1208 aa28.02■■■□□ 2.08
GCOM1-201ENST00000380568 KCNH8Q96L42 1107 aa28■■■□□ 2.07
GCOM1-201ENST00000380568 SYCP2Q9BX26 1530 aa27.98■■■□□ 2.07
GCOM1-201ENST00000380568 ABCC1P33527 1531 aa27.96■■■□□ 2.07
GCOM1-201ENST00000380568 KDM6BO15054 1643 aa27.93■■■□□ 2.06
GCOM1-201ENST00000380568 PLXNC1O60486 1568 aa27.92■■■□□ 2.06
GCOM1-201ENST00000380568 RIMBP3CA6NJZ7 1639 aa27.91■■■□□ 2.06
GCOM1-201ENST00000380568 RIMBP3BA6NNM3 1639 aa27.91■■■□□ 2.06
GCOM1-201ENST00000380568 RIMBP3Q9UFD9 1639 aa27.91■■■□□ 2.06
GCOM1-201ENST00000380568 ANKRD50Q9ULJ7 1429 aa27.9■■■□□ 2.06
GCOM1-201ENST00000380568 HNRNPMP52272 730 aaKnown RBP eCLIP27.9■■■□□ 2.06
GCOM1-201ENST00000380568 CFAP74Q9C0B2 1584 aa27.89■■■□□ 2.06
GCOM1-201ENST00000380568 KIF15Q9NS87 1388 aa27.86■■■□□ 2.05
GCOM1-201ENST00000380568 FANCAO15360 1455 aa27.85■■■□□ 2.05
GCOM1-201ENST00000380568 TRIM52Q96A61 297 aa27.85■■■□□ 2.05
GCOM1-201ENST00000380568 RTEL1-TNFRSF6BF6WH68 1400 aa27.83■■■□□ 2.05
GCOM1-201ENST00000380568 KDM5DQ9BY66 1539 aa27.83■■■□□ 2.05
GCOM1-201ENST00000380568 ARHGEF12Q9NZN5 1544 aa27.81■■■□□ 2.04
GCOM1-201ENST00000380568 MPHOSPH9Q99550 1183 aa27.79■■■□□ 2.04
GCOM1-201ENST00000380568 DUOX2Q9NRD8 1548 aa27.79■■■□□ 2.04
GCOM1-201ENST00000380568 ERBINQ96RT1 1412 aa27.75■■■□□ 2.03
GCOM1-201ENST00000380568 DENND4BO75064 1496 aaPredicted RBP27.75■■■□□ 2.03
GCOM1-201ENST00000380568 CD109Q6YHK3 1445 aa27.74■■■□□ 2.03
GCOM1-201ENST00000380568 ADGRL1O94910 1474 aa27.74■■■□□ 2.03
GCOM1-201ENST00000380568 GLI2P10070 1586 aa27.74■■■□□ 2.03
GCOM1-201ENST00000380568 PZPP20742 1482 aa27.73■■■□□ 2.03
GCOM1-201ENST00000380568 TRAPPC8Q9Y2L5 1435 aa27.71■■■□□ 2.03
GCOM1-201ENST00000380568 UNC13BO14795 1591 aa27.7■■■□□ 2.02
GCOM1-201ENST00000380568 ZFYVE16Q7Z3T8 1539 aa27.69■■■□□ 2.02
GCOM1-201ENST00000380568 NEO1Q92859 1461 aa27.69■■■□□ 2.02
GCOM1-201ENST00000380568 TONSLQ96HA7 1378 aa27.69■■■□□ 2.02
GCOM1-201ENST00000380568 SLC4A1APQ9BWU0 796 aaKnown RBP27.69■■■□□ 2.02
GCOM1-201ENST00000380568 ZNF316A6NFI3 1004 aaPredicted RBP27.68■■■□□ 2.02
GCOM1-201ENST00000380568 CYB5RLQ6IPT4 315 aa27.68■■■□□ 2.02
GCOM1-201ENST00000380568 INO80Q9ULG1 1556 aaPredicted RBP27.68■■■□□ 2.02
GCOM1-201ENST00000380568 SPAG9O60271 1321 aaKnown RBP27.67■■■□□ 2.02
GCOM1-201ENST00000380568 SIN3AQ96ST3 1273 aa27.67■■■□□ 2.02
GCOM1-201ENST00000380568 SCAPERQ9BY12 1400 aa27.66■■■□□ 2.02
GCOM1-201ENST00000380568 ZNF518AQ6AHZ1 1483 aa27.66■■■□□ 2.02
GCOM1-201ENST00000380568 ANKRD30BQ9BXX2 1392 aa27.65■■■□□ 2.02
GCOM1-201ENST00000380568 NEUROD1Q13562 356 aa27.64■■■□□ 2.02
GCOM1-201ENST00000380568 ATP7AQ04656 1500 aa27.64■■■□□ 2.02
GCOM1-201ENST00000380568 MAP3K4Q9Y6R4 1608 aa27.64■■■□□ 2.01
GCOM1-201ENST00000380568 NUP155O75694 1391 aa27.63■■■□□ 2.01
GCOM1-201ENST00000380568 MAGI2Q86UL8 1455 aa27.62■■■□□ 2.01
GCOM1-201ENST00000380568 RPRD2Q5VT52 1461 aaKnown RBP27.6■■■□□ 2.01
GCOM1-201ENST00000380568 KDM5CP41229 1560 aa27.58■■■□□ 2.01
GCOM1-201ENST00000380568 IQGAP3Q86VI3 1631 aa27.57■■■□□ 2
GCOM1-201ENST00000380568 EIF2AK4Q9P2K8 1649 aaKnown RBP27.57■■■□□ 2
GCOM1-201ENST00000380568 FAM135AQ9P2D6 1515 aa27.57■■■□□ 2
GCOM1-201ENST00000380568 POGZQ7Z3K3 1410 aa27.57■■■□□ 2
GCOM1-201ENST00000380568 PPP1R15AO75807 674 aaPredicted RBP27.57■■■□□ 2
GCOM1-201ENST00000380568 DIP2BQ9P265 1576 aa27.53■■■□□ 2
GCOM1-201ENST00000380568 AFAP1Q8N556 730 aa27.52■■■□□ 2
GCOM1-201ENST00000380568 MLH3Q9UHC1 1453 aa27.52■■■□□ 2
GCOM1-201ENST00000380568 PKD2Q13563 968 aa27.51■■□□□ 1.99
GCOM1-201ENST00000380568 DEPDC5O75140 1603 aa27.49■■□□□ 1.99
GCOM1-201ENST00000380568 HECW2Q9P2P5 1572 aa27.48■■□□□ 1.99
GCOM1-201ENST00000380568 KIDINS220Q9ULH0 1771 aa27.47■■□□□ 1.99
GCOM1-201ENST00000380568 DHX29Q7Z478 1369 aaKnown RBP27.47■■□□□ 1.99
GCOM1-201ENST00000380568 TEX14Q8IWB6 1497 aa27.46■■□□□ 1.99
GCOM1-201ENST00000380568 FOXD1Q16676 465 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms