RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 GOLGA3Q08378 1498 aa11.04□□□□□ -0.64
NHLRC3-201ENST00000379599 RAB3GAP2Q9H2M9 1393 aa11.04□□□□□ -0.64
NHLRC3-201ENST00000379599 MYH16Q9H6N6 1097 aa11.04□□□□□ -0.64
NHLRC3-201ENST00000379599 SMG6Q86US8 1419 aaKnown RBP11.03□□□□□ -0.64
NHLRC3-201ENST00000379599 MAP7D2Q96T17 732 aa11.03□□□□□ -0.64
NHLRC3-201ENST00000379599 SLKQ9H2G2 1235 aaPredicted RBP11.02□□□□□ -0.65
NHLRC3-201ENST00000379599 ZNF830Q96NB3 372 aaPredicted RBP11.02□□□□□ -0.65
NHLRC3-201ENST00000379599 ERBB4Q15303 1308 aa11.01□□□□□ -0.65
NHLRC3-201ENST00000379599 RNF123Q5XPI4 1314 aa11.01□□□□□ -0.65
NHLRC3-201ENST00000379599 MAPKBP1O60336 1514 aa11.01□□□□□ -0.65
NHLRC3-201ENST00000379599 PPP4R3BQ5MIZ7 849 aa11.01□□□□□ -0.65
NHLRC3-201ENST00000379599 KANK4Q5T7N3 995 aaPredicted RBP11□□□□□ -0.65
NHLRC3-201ENST00000379599 ZFP91Q96JP5 570 aaPredicted RBP11□□□□□ -0.65
NHLRC3-201ENST00000379599 RUSC2Q8N2Y8 1516 aa10.99□□□□□ -0.65
NHLRC3-201ENST00000379599 FTSJ3Q8IY81 847 aaKnown RBP10.99□□□□□ -0.65
NHLRC3-201ENST00000379599 TMEM51Q9NW97 253 aa10.99□□□□□ -0.65
NHLRC3-201ENST00000379599 CDK11BP21127 795 aaKnown RBP10.98□□□□□ -0.65
NHLRC3-201ENST00000379599 PRKRIP1Q9H875 184 aaPredicted RBP10.98□□□□□ -0.65
NHLRC3-201ENST00000379599 MAPK8IP2Q13387 824 aaPredicted RBP10.98□□□□□ -0.65
NHLRC3-201ENST00000379599 RIPK4P57078 832 aa10.97□□□□□ -0.65
NHLRC3-201ENST00000379599 TONSLQ96HA7 1378 aa10.97□□□□□ -0.65
NHLRC3-201ENST00000379599 PEG3Q9GZU2 1588 aa10.97□□□□□ -0.65
NHLRC3-201ENST00000379599 DMTNQ08495 405 aa10.96□□□□□ -0.65
NHLRC3-201ENST00000379599 CEP164Q9UPV0 1460 aa10.96□□□□□ -0.65
NHLRC3-201ENST00000379599 MRE11P49959 708 aa10.96□□□□□ -0.66
NHLRC3-201ENST00000379599 RRP1P56182 461 aaKnown RBP10.96□□□□□ -0.66
NHLRC3-201ENST00000379599 BRD2P25440 801 aaKnown RBP10.95□□□□□ -0.66
NHLRC3-201ENST00000379599 R3HCC1Q9Y3T6 440 aaKnown RBP10.95□□□□□ -0.66
NHLRC3-201ENST00000379599 MROH2BQ7Z745 1585 aa10.95□□□□□ -0.66
NHLRC3-201ENST00000379599 FSD2A1L4K1 749 aa10.94□□□□□ -0.66
NHLRC3-201ENST00000379599 UTP14CQ5TAP6 766 aaKnown RBP10.94□□□□□ -0.66
NHLRC3-201ENST00000379599 CCNB3Q8WWL7 1395 aa10.94□□□□□ -0.66
NHLRC3-201ENST00000379599 NCBP3Q53F19 620 aaKnown RBP10.94□□□□□ -0.66
NHLRC3-201ENST00000379599 DNTTIP2Q5QJE6 756 aaKnown RBP10.94□□□□□ -0.66
NHLRC3-201ENST00000379599 FAM161AQ3B820 660 aa10.93□□□□□ -0.66
NHLRC3-201ENST00000379599 CHMP4AQ9BY43 222 aa10.93□□□□□ -0.66
NHLRC3-201ENST00000379599 GRPEL1Q9HAV7 217 aa10.92□□□□□ -0.66
NHLRC3-201ENST00000379599 SECISBP2LQ93073 1101 aaKnown RBP10.92□□□□□ -0.66
NHLRC3-201ENST00000379599 E9PSI1 815 aa10.91□□□□□ -0.66
NHLRC3-201ENST00000379599 HSPA5P11021 654 aaKnown RBP10.91□□□□□ -0.66
NHLRC3-201ENST00000379599 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.91□□□□□ -0.66
NHLRC3-201ENST00000379599 BECN1Q14457 450 aa10.9□□□□□ -0.66
NHLRC3-201ENST00000379599 CUX2O14529 1486 aa10.9□□□□□ -0.66
NHLRC3-201ENST00000379599 MTERF4Q7Z6M4 381 aaKnown RBP10.9□□□□□ -0.66
NHLRC3-201ENST00000379599 UQCRHLA0A096LP55 91 aa10.9□□□□□ -0.67
NHLRC3-201ENST00000379599 OFD1O75665 1012 aa10.9□□□□□ -0.67
NHLRC3-201ENST00000379599 UQCRHP07919 91 aa10.9□□□□□ -0.67
NHLRC3-201ENST00000379599 MSNP26038 577 aaKnown RBP10.9□□□□□ -0.67
NHLRC3-201ENST00000379599 RCAN3Q9UKA8 241 aa10.9□□□□□ -0.67
NHLRC3-201ENST00000379599 ZBTB22O15209 634 aa10.89□□□□□ -0.67
NHLRC3-201ENST00000379599 ZSCAN20P17040 1043 aaPredicted RBP10.89□□□□□ -0.67
NHLRC3-201ENST00000379599 SETD5Q9C0A6 1442 aa10.89□□□□□ -0.67
NHLRC3-201ENST00000379599 SMARCA2P51531 1590 aa10.89□□□□□ -0.67
NHLRC3-201ENST00000379599 SPRYD3Q8NCJ5 442 aa10.89□□□□□ -0.67
NHLRC3-201ENST00000379599 RRBP1Q9P2E9 1410 aaKnown RBP10.88□□□□□ -0.67
NHLRC3-201ENST00000379599 PLIN1O60240 522 aa10.87□□□□□ -0.67
NHLRC3-201ENST00000379599 TRAK2O60296 914 aa10.87□□□□□ -0.67
NHLRC3-201ENST00000379599 KIF20AO95235 890 aa10.87□□□□□ -0.67
NHLRC3-201ENST00000379599 FAM50AQ14320 339 aaKnown RBP10.87□□□□□ -0.67
NHLRC3-201ENST00000379599 C8orf34Q49A92 452 aa10.87□□□□□ -0.67
NHLRC3-201ENST00000379599 TEX2Q8IWB9 1127 aa10.87□□□□□ -0.67
NHLRC3-201ENST00000379599 CGNQ9P2M7 1197 aaKnown RBP10.87□□□□□ -0.67
NHLRC3-201ENST00000379599 CNTLNQ9NXG0 1405 aa10.86□□□□□ -0.67
NHLRC3-201ENST00000379599 WIZO95785 1651 aa10.86□□□□□ -0.67
NHLRC3-201ENST00000379599 CBX1P83916 185 aa10.86□□□□□ -0.67
NHLRC3-201ENST00000379599 MCM4P33991 863 aa10.85□□□□□ -0.67
NHLRC3-201ENST00000379599 CCDC94Q9BW85 323 aaPredicted RBP10.85□□□□□ -0.67
NHLRC3-201ENST00000379599 ZSCAN30Q86W11 494 aa10.85□□□□□ -0.67
NHLRC3-201ENST00000379599 EIF4G2P78344 907 aaKnown RBP eCLIP10.84□□□□□ -0.67
NHLRC3-201ENST00000379599 TMC1Q8TDI8 760 aa10.84□□□□□ -0.67
NHLRC3-201ENST00000379599 CRBNQ96SW2 442 aa10.84□□□□□ -0.67
NHLRC3-201ENST00000379599 GTPBP4Q9BZE4 634 aaKnown RBP10.84□□□□□ -0.67
NHLRC3-201ENST00000379599 LETM1O95202 739 aaPredicted RBP10.84□□□□□ -0.67
NHLRC3-201ENST00000379599 IRX3P78415 501 aaPredicted RBP10.84□□□□□ -0.67
NHLRC3-201ENST00000379599 TERF1P54274 439 aa10.83□□□□□ -0.67
NHLRC3-201ENST00000379599 CERS3Q8IU89 383 aa10.83□□□□□ -0.67
NHLRC3-201ENST00000379599 POLR3GLQ9BT43 218 aa10.83□□□□□ -0.67
NHLRC3-201ENST00000379599 HAP1P54257 671 aaPredicted RBP10.83□□□□□ -0.68
NHLRC3-201ENST00000379599 AEBP1Q8IUX7 1158 aa10.82□□□□□ -0.68
NHLRC3-201ENST00000379599 KIF21BO75037 1637 aa10.81□□□□□ -0.68
NHLRC3-201ENST00000379599 DYNC1I1O14576 645 aa10.81□□□□□ -0.68
NHLRC3-201ENST00000379599 IGSF3O75054 1194 aa10.81□□□□□ -0.68
NHLRC3-201ENST00000379599 KTN1Q86UP2 1357 aaKnown RBP10.81□□□□□ -0.68
NHLRC3-201ENST00000379599 XPCQ01831 940 aaPredicted RBP10.8□□□□□ -0.68
NHLRC3-201ENST00000379599 TAF3Q5VWG9 929 aa10.79□□□□□ -0.68
NHLRC3-201ENST00000379599 FHAD1B1AJZ9 1412 aa10.79□□□□□ -0.68
NHLRC3-201ENST00000379599 ZBTB7CA1YPR0 619 aa10.78□□□□□ -0.68
NHLRC3-201ENST00000379599 RGS22Q8NE09 1264 aa10.78□□□□□ -0.68
NHLRC3-201ENST00000379599 ANTXR1Q9H6X2 564 aa10.78□□□□□ -0.68
NHLRC3-201ENST00000379599 CCDC173Q0VFZ6 552 aa10.77□□□□□ -0.68
NHLRC3-201ENST00000379599 CENPQQ7L2Z9 268 aaPredicted RBP10.77□□□□□ -0.68
NHLRC3-201ENST00000379599 ZNF771Q7L3S4 317 aaPredicted RBP10.77□□□□□ -0.68
NHLRC3-201ENST00000379599 GAS2L3Q86XJ1 694 aa10.77□□□□□ -0.69
NHLRC3-201ENST00000379599 ISY1Q9ULR0 285 aaKnown RBP10.77□□□□□ -0.69
NHLRC3-201ENST00000379599 KCNJ4P48050 445 aa10.76□□□□□ -0.69
NHLRC3-201ENST00000379599 CHRM1P11229 460 aaPredicted RBP10.76□□□□□ -0.69
NHLRC3-201ENST00000379599 CCDC7Q96M83 1385 aa10.75□□□□□ -0.69
NHLRC3-201ENST00000379599 SAMD1Q6SPF0 538 aaPredicted RBP10.75□□□□□ -0.69
NHLRC3-201ENST00000379599 NASPP49321 788 aaPredicted RBP10.75□□□□□ -0.69
NHLRC3-201ENST00000379599 SPDYE4A6NLX3 237 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms