RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 DDX10Q13206 875 aaKnown RBP19.7■□□□□ 0.74
SNCAIP-203ENST00000379538 CFDP1Q9UEE9 299 aaPredicted RBP19.7■□□□□ 0.74
SNCAIP-203ENST00000379538 ARHGEF11O15085 1522 aa19.7■□□□□ 0.74
SNCAIP-203ENST00000379538 HIRIP3Q9BW71 556 aaPredicted RBP19.69■□□□□ 0.74
SNCAIP-203ENST00000379538 RAB3GAP2Q9H2M9 1393 aa19.68■□□□□ 0.74
SNCAIP-203ENST00000379538 TRIM52Q96A61 297 aa19.67■□□□□ 0.74
SNCAIP-203ENST00000379538 ABCC2Q92887 1545 aa19.67■□□□□ 0.74
SNCAIP-203ENST00000379538 CYB5RLQ6IPT4 315 aa19.66■□□□□ 0.74
SNCAIP-203ENST00000379538 RIMBP3CA6NJZ7 1639 aa19.65■□□□□ 0.74
SNCAIP-203ENST00000379538 RIMBP3BA6NNM3 1639 aa19.65■□□□□ 0.74
SNCAIP-203ENST00000379538 PTPN23Q9H3S7 1636 aa19.65■□□□□ 0.74
SNCAIP-203ENST00000379538 RIMBP3Q9UFD9 1639 aa19.65■□□□□ 0.74
SNCAIP-203ENST00000379538 GPATCH8Q9UKJ3 1502 aaKnown RBP19.62■□□□□ 0.73
SNCAIP-203ENST00000379538 MSH5O43196 834 aa19.6■□□□□ 0.73
SNCAIP-203ENST00000379538 HNRNPMP52272 730 aaKnown RBP eCLIP19.6■□□□□ 0.73
SNCAIP-203ENST00000379538 SETD5Q9C0A6 1442 aa19.58■□□□□ 0.73
SNCAIP-203ENST00000379538 ADCY10Q96PN6 1610 aa19.58■□□□□ 0.72
SNCAIP-203ENST00000379538 SIN3AQ96ST3 1273 aa19.57■□□□□ 0.72
SNCAIP-203ENST00000379538 KDM5BQ9UGL1 1544 aa19.56■□□□□ 0.72
SNCAIP-203ENST00000379538 ABCC10Q5T3U5 1492 aa19.55■□□□□ 0.72
SNCAIP-203ENST00000379538 ZCCHC11Q5TAX3 1644 aaKnown RBP19.55■□□□□ 0.72
SNCAIP-203ENST00000379538 MIA2Q96PC5 1412 aa19.53■□□□□ 0.72
SNCAIP-203ENST00000379538 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.53■□□□□ 0.72
SNCAIP-203ENST00000379538 NEFLP07196 543 aa19.52■□□□□ 0.72
SNCAIP-203ENST00000379538 ABCC5O15440 1437 aa19.52■□□□□ 0.71
SNCAIP-203ENST00000379538 CAMSAP2Q08AD1 1489 aa19.51■□□□□ 0.71
SNCAIP-203ENST00000379538 TCOF1Q13428 1488 aaKnown RBP19.51■□□□□ 0.71
SNCAIP-203ENST00000379538 TTC37Q6PGP7 1564 aa19.51■□□□□ 0.71
SNCAIP-203ENST00000379538 IRX6P78412 446 aaPredicted RBP19.5■□□□□ 0.71
SNCAIP-203ENST00000379538 NAIPQ13075 1403 aa19.49■□□□□ 0.71
SNCAIP-203ENST00000379538 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.49■□□□□ 0.71
SNCAIP-203ENST00000379538 DAPK1P53355 1430 aa19.49■□□□□ 0.71
SNCAIP-203ENST00000379538 CDC42BPAQ5VT25 1732 aa19.49■□□□□ 0.71
SNCAIP-203ENST00000379538 NPM1P06748 294 aaKnown RBP eCLIP19.48■□□□□ 0.71
SNCAIP-203ENST00000379538 KDM6BO15054 1643 aa19.46■□□□□ 0.71
SNCAIP-203ENST00000379538 FOXD1Q16676 465 aa19.46■□□□□ 0.71
SNCAIP-203ENST00000379538 ASXL2Q76L83 1435 aa19.45■□□□□ 0.7
SNCAIP-203ENST00000379538 HFM1A2PYH4 1435 aa19.44■□□□□ 0.7
SNCAIP-203ENST00000379538 PPP1R15AO75807 674 aaPredicted RBP19.43■□□□□ 0.7
SNCAIP-203ENST00000379538 ARHGAP5Q13017 1502 aa19.42■□□□□ 0.7
SNCAIP-203ENST00000379538 MAPKBP1O60336 1514 aa19.42■□□□□ 0.7
SNCAIP-203ENST00000379538 CDC42BPBQ9Y5S2 1711 aa19.41■□□□□ 0.7
SNCAIP-203ENST00000379538 WDR7Q9Y4E6 1490 aa19.39■□□□□ 0.7
SNCAIP-203ENST00000379538 AFAP1Q8N556 730 aa19.39■□□□□ 0.69
SNCAIP-203ENST00000379538 ITSN2Q9NZM3 1697 aa19.38■□□□□ 0.69
SNCAIP-203ENST00000379538 TSPY4P0CV99 314 aa19.38■□□□□ 0.69
SNCAIP-203ENST00000379538 TSPY10P0CW01 314 aa19.38■□□□□ 0.69
SNCAIP-203ENST00000379538 SAMD9LQ8IVG5 1584 aa19.37■□□□□ 0.69
SNCAIP-203ENST00000379538 DNMT1P26358 1616 aaKnown RBP19.37■□□□□ 0.69
SNCAIP-203ENST00000379538 SYCP2Q9BX26 1530 aa19.35■□□□□ 0.69
SNCAIP-203ENST00000379538 ARHGEF12Q9NZN5 1544 aa19.35■□□□□ 0.69
SNCAIP-203ENST00000379538 MBD5Q9P267 1494 aa19.35■□□□□ 0.69
SNCAIP-203ENST00000379538 AKNAQ7Z591 1439 aa19.34■□□□□ 0.69
SNCAIP-203ENST00000379538 NCOA1Q15788 1441 aa19.34■□□□□ 0.69
SNCAIP-203ENST00000379538 ANP32CO43423 234 aa19.34■□□□□ 0.69
SNCAIP-203ENST00000379538 EFCAB2Q5VUJ9 269 aa19.34■□□□□ 0.69
SNCAIP-203ENST00000379538 PLCH2O75038 1416 aa19.33■□□□□ 0.68
SNCAIP-203ENST00000379538 ARAP3Q8WWN8 1544 aa19.33■□□□□ 0.68
SNCAIP-203ENST00000379538 PREX2Q70Z35 1606 aa19.33■□□□□ 0.68
SNCAIP-203ENST00000379538 C9orf84Q5VXU9 1444 aa19.32■□□□□ 0.68
SNCAIP-203ENST00000379538 ABCA9Q8IUA7 1624 aa19.31■□□□□ 0.68
SNCAIP-203ENST00000379538 MYT1LQ9UL68 1186 aa19.3■□□□□ 0.68
SNCAIP-203ENST00000379538 GLI2P10070 1586 aa19.3■□□□□ 0.68
SNCAIP-203ENST00000379538 TRAPPC8Q9Y2L5 1435 aa19.3■□□□□ 0.68
SNCAIP-203ENST00000379538 MPHOSPH9Q99550 1183 aa19.29■□□□□ 0.68
SNCAIP-203ENST00000379538 MYO5CQ9NQX4 1742 aa19.28■□□□□ 0.68
SNCAIP-203ENST00000379538 ERICH6Q7L0X2 663 aa19.27■□□□□ 0.67
SNCAIP-203ENST00000379538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.27■□□□□ 0.67
SNCAIP-203ENST00000379538 ANKRD30AQ9BXX3 1397 aa19.27■□□□□ 0.67
SNCAIP-203ENST00000379538 DNAJC5Q9H3Z4 198 aa19.26■□□□□ 0.67
SNCAIP-203ENST00000379538 HNRNPUQ00839 825 aaKnown RBP eCLIP19.26■□□□□ 0.67
SNCAIP-203ENST00000379538 SLC4A1APQ9BWU0 796 aaKnown RBP19.26■□□□□ 0.67
SNCAIP-203ENST00000379538 ROCK1Q13464 1354 aa19.26■□□□□ 0.67
SNCAIP-203ENST00000379538 DENND4BO75064 1496 aaPredicted RBP19.26■□□□□ 0.67
SNCAIP-203ENST00000379538 KIF15Q9NS87 1388 aa19.25■□□□□ 0.67
SNCAIP-203ENST00000379538 FANCAO15360 1455 aa19.24■□□□□ 0.67
SNCAIP-203ENST00000379538 CCER2I3L3R5 266 aa19.24■□□□□ 0.67
SNCAIP-203ENST00000379538 CCDC141Q6ZP82 1450 aa19.23■□□□□ 0.67
SNCAIP-203ENST00000379538 ANKRD50Q9ULJ7 1429 aa19.23■□□□□ 0.67
SNCAIP-203ENST00000379538 FAM69CQ0P6D2 419 aa19.23■□□□□ 0.67
SNCAIP-203ENST00000379538 CD109Q6YHK3 1445 aa19.22■□□□□ 0.67
SNCAIP-203ENST00000379538 CFAP74Q9C0B2 1584 aa19.22■□□□□ 0.67
SNCAIP-203ENST00000379538 GCC2Q8IWJ2 1684 aa19.21■□□□□ 0.67
SNCAIP-203ENST00000379538 RAPGEF3O95398 923 aa19.21■□□□□ 0.67
SNCAIP-203ENST00000379538 SCAPERQ9BY12 1400 aa19.2■□□□□ 0.66
SNCAIP-203ENST00000379538 CROCC2H7BZ55 1655 aa19.2■□□□□ 0.66
SNCAIP-203ENST00000379538 MAP3K4Q9Y6R4 1608 aa19.19■□□□□ 0.66
SNCAIP-203ENST00000379538 FANCIQ9NVI1 1328 aa19.19■□□□□ 0.66
SNCAIP-203ENST00000379538 SPAG9O60271 1321 aaKnown RBP19.18■□□□□ 0.66
SNCAIP-203ENST00000379538 DIP2BQ9P265 1576 aa19.18■□□□□ 0.66
SNCAIP-203ENST00000379538 NUP155O75694 1391 aa19.17■□□□□ 0.66
SNCAIP-203ENST00000379538 PKD2Q13563 968 aa19.16■□□□□ 0.66
SNCAIP-203ENST00000379538 ADGRL1O94910 1474 aa19.16■□□□□ 0.66
SNCAIP-203ENST00000379538 ADGRL2O95490 1459 aa19.16■□□□□ 0.66
SNCAIP-203ENST00000379538 KIAA1107Q9UPP5 1409 aa19.15■□□□□ 0.66
SNCAIP-203ENST00000379538 ABCC1P33527 1531 aa19.15■□□□□ 0.66
SNCAIP-203ENST00000379538 ARHGEF5Q12774 1597 aa19.14■□□□□ 0.66
SNCAIP-203ENST00000379538 RSPH4AQ5TD94 716 aa19.14■□□□□ 0.65
SNCAIP-203ENST00000379538 PLEKHH2Q8IVE3 1493 aa19.14■□□□□ 0.65
SNCAIP-203ENST00000379538 ADGBQ8N7X0 1667 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms