RNA–Protein interactions for RNA: ENST00000378747.7

OPTN-202, Transcript of optineurin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene OPTN, Length 3,400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-202ENST00000378747 KDM5DQ9BY66 1539 aa12.68□□□□□ -0.38
OPTN-202ENST00000378747 ZNF608Q9ULD9 1512 aaPredicted RBP12.68□□□□□ -0.38
OPTN-202ENST00000378747 ANKRD30BQ9BXX2 1392 aa12.68□□□□□ -0.38
OPTN-202ENST00000378747 TONSLQ96HA7 1378 aa12.67□□□□□ -0.38
OPTN-202ENST00000378747 NCOA1Q15788 1441 aa12.67□□□□□ -0.38
OPTN-202ENST00000378747 CDC42BPAQ5VT25 1732 aa12.66□□□□□ -0.38
OPTN-202ENST00000378747 PZPP20742 1482 aa12.66□□□□□ -0.38
OPTN-202ENST00000378747 ABCA8O94911 1581 aa12.65□□□□□ -0.38
OPTN-202ENST00000378747 NUP160Q12769 1436 aa12.65□□□□□ -0.38
OPTN-202ENST00000378747 SHANK2Q9UPX8 1470 aa12.64□□□□□ -0.39
OPTN-202ENST00000378747 DDX10Q13206 875 aaKnown RBP12.63□□□□□ -0.39
OPTN-202ENST00000378747 KIF14Q15058 1648 aa12.63□□□□□ -0.39
OPTN-202ENST00000378747 TROQ12816 1431 aaPredicted RBP12.62□□□□□ -0.39
OPTN-202ENST00000378747 CNTLNQ9NXG0 1405 aa12.62□□□□□ -0.39
OPTN-202ENST00000378747 TSHZ2Q9NRE2 1034 aa12.61□□□□□ -0.39
OPTN-202ENST00000378747 SYNJ2O15056 1496 aa12.61□□□□□ -0.39
OPTN-202ENST00000378747 CAMSAP2Q08AD1 1489 aa12.61□□□□□ -0.39
OPTN-202ENST00000378747 ABCC10Q5T3U5 1492 aa12.61□□□□□ -0.39
OPTN-202ENST00000378747 GPATCH8Q9UKJ3 1502 aaKnown RBP12.61□□□□□ -0.39
OPTN-202ENST00000378747 ARHGEF5Q12774 1597 aa12.6□□□□□ -0.39
OPTN-202ENST00000378747 WASHC2AQ641Q2 1341 aa12.59□□□□□ -0.39
OPTN-202ENST00000378747 KDM5CP41229 1560 aa12.59□□□□□ -0.39
OPTN-202ENST00000378747 UHRF1BP1Q6BDS2 1440 aa12.58□□□□□ -0.39
OPTN-202ENST00000378747 E9PCH4 1651 aa12.58□□□□□ -0.4
OPTN-202ENST00000378747 ARHGEF12Q9NZN5 1544 aa12.57□□□□□ -0.4
OPTN-202ENST00000378747 MPHOSPH9Q99550 1183 aa12.57□□□□□ -0.4
OPTN-202ENST00000378747 PTPRGP23470 1445 aa12.57□□□□□ -0.4
OPTN-202ENST00000378747 BCORL1Q5H9F3 1711 aa12.56□□□□□ -0.4
OPTN-202ENST00000378747 ANP32CO43423 234 aa12.55□□□□□ -0.4
OPTN-202ENST00000378747 MAST1Q9Y2H9 1570 aa12.55□□□□□ -0.4
OPTN-202ENST00000378747 CCDC7Q96M83 1385 aa12.54□□□□□ -0.4
OPTN-202ENST00000378747 SHROOM2Q13796 1616 aa12.53□□□□□ -0.4
OPTN-202ENST00000378747 LAMC1P11047 1609 aa12.53□□□□□ -0.4
OPTN-202ENST00000378747 ATP1B4Q9UN42 357 aaPredicted RBP12.53□□□□□ -0.4
OPTN-202ENST00000378747 HSPA5P11021 654 aaKnown RBP12.52□□□□□ -0.41
OPTN-202ENST00000378747 KIAA1107Q9UPP5 1409 aa12.51□□□□□ -0.41
OPTN-202ENST00000378747 PREX2Q70Z35 1606 aa12.51□□□□□ -0.41
OPTN-202ENST00000378747 UNC13BO14795 1591 aa12.5□□□□□ -0.41
OPTN-202ENST00000378747 RALGAPBQ86X10 1494 aa12.5□□□□□ -0.41
OPTN-202ENST00000378747 PRG4Q92954 1404 aaPredicted RBP12.5□□□□□ -0.41
OPTN-202ENST00000378747 PLB1Q6P1J6 1458 aa12.5□□□□□ -0.41
OPTN-202ENST00000378747 CDC42BPBQ9Y5S2 1711 aa12.5□□□□□ -0.41
OPTN-202ENST00000378747 ERICH6BQ5W0A0 696 aa12.49□□□□□ -0.41
OPTN-202ENST00000378747 L3MBTL2Q969R5 705 aa12.49□□□□□ -0.41
OPTN-202ENST00000378747 RRP7BPQ9NSQ0 103 aa12.49□□□□□ -0.41
OPTN-202ENST00000378747 DHX29Q7Z478 1369 aaKnown RBP12.49□□□□□ -0.41
OPTN-202ENST00000378747 ARID4BQ4LE39 1312 aaPredicted RBP12.48□□□□□ -0.41
OPTN-202ENST00000378747 NBPF8Q3BBV2 869 aa12.47□□□□□ -0.41
OPTN-202ENST00000378747 C11orf95C9JLR9 678 aaPredicted RBP12.47□□□□□ -0.41
OPTN-202ENST00000378747 EIF4G2P78344 907 aaKnown RBP eCLIP12.46□□□□□ -0.41
OPTN-202ENST00000378747 ATP10BO94823 1461 aa12.46□□□□□ -0.41
OPTN-202ENST00000378747 PLXNC1O60486 1568 aa12.46□□□□□ -0.42
OPTN-202ENST00000378747 HIRIP3Q9BW71 556 aaPredicted RBP12.45□□□□□ -0.42
OPTN-202ENST00000378747 SAMD9LQ8IVG5 1584 aa12.45□□□□□ -0.42
OPTN-202ENST00000378747 TRPM1Q7Z4N2 1603 aa12.45□□□□□ -0.42
OPTN-202ENST00000378747 BCANQ96GW7 911 aa12.44□□□□□ -0.42
OPTN-202ENST00000378747 MAGI2Q86UL8 1455 aa12.44□□□□□ -0.42
OPTN-202ENST00000378747 CARMIL2Q6F5E8 1435 aa12.43□□□□□ -0.42
OPTN-202ENST00000378747 ZNF644Q9H582 1327 aaPredicted RBP12.43□□□□□ -0.42
OPTN-202ENST00000378747 PRKRIP1Q9H875 184 aaPredicted RBP12.43□□□□□ -0.42
OPTN-202ENST00000378747 IQGAP3Q86VI3 1631 aa12.42□□□□□ -0.42
OPTN-202ENST00000378747 FKBP8Q14318 412 aa12.42□□□□□ -0.42
OPTN-202ENST00000378747 KIF7Q2M1P5 1343 aa12.41□□□□□ -0.42
OPTN-202ENST00000378747 CDK11AQ9UQ88 783 aaPredicted RBP12.41□□□□□ -0.42
OPTN-202ENST00000378747 CHIC2Q9UKJ5 165 aa12.4□□□□□ -0.42
OPTN-202ENST00000378747 ANKRD30AQ9BXX3 1397 aa12.4□□□□□ -0.42
OPTN-202ENST00000378747 RNF123Q5XPI4 1314 aa12.4□□□□□ -0.42
OPTN-202ENST00000378747 ZBED9Q6R2W3 1325 aa12.4□□□□□ -0.42
OPTN-202ENST00000378747 ATP10AO60312 1499 aa12.4□□□□□ -0.42
OPTN-202ENST00000378747 C9orf84Q5VXU9 1444 aa12.4□□□□□ -0.42
OPTN-202ENST00000378747 ANKRD50Q9ULJ7 1429 aa12.4□□□□□ -0.42
OPTN-202ENST00000378747 ZMYM4Q5VZL5 1548 aa12.4□□□□□ -0.42
OPTN-202ENST00000378747 RNF17Q9BXT8 1623 aaKnown RBP12.4□□□□□ -0.43
OPTN-202ENST00000378747 MYO5CQ9NQX4 1742 aa12.38□□□□□ -0.43
OPTN-202ENST00000378747 SMG6Q86US8 1419 aaKnown RBP12.37□□□□□ -0.43
OPTN-202ENST00000378747 FAM135AQ9P2D6 1515 aa12.36□□□□□ -0.43
OPTN-202ENST00000378747 TRIM52Q96A61 297 aa12.36□□□□□ -0.43
OPTN-202ENST00000378747 KTN1Q86UP2 1357 aaKnown RBP12.36□□□□□ -0.43
OPTN-202ENST00000378747 PRDM15P57071 1507 aaPredicted RBP12.36□□□□□ -0.43
OPTN-202ENST00000378747 CCDC184Q52MB2 194 aa12.36□□□□□ -0.43
OPTN-202ENST00000378747 ROCK2O75116 1388 aaKnown RBP12.35□□□□□ -0.43
OPTN-202ENST00000378747 INSRP06213 1382 aa12.35□□□□□ -0.43
OPTN-202ENST00000378747 CHD1O14646 1710 aa12.35□□□□□ -0.43
OPTN-202ENST00000378747 GPRASP1Q5JY77 1395 aa12.35□□□□□ -0.43
OPTN-202ENST00000378747 CCDC141Q6ZP82 1450 aa12.35□□□□□ -0.43
OPTN-202ENST00000378747 LRPPRCP42704 1394 aaKnown RBP12.34□□□□□ -0.43
OPTN-202ENST00000378747 TTC37Q6PGP7 1564 aa12.34□□□□□ -0.43
OPTN-202ENST00000378747 NEURL4Q96JN8 1562 aa12.34□□□□□ -0.43
OPTN-202ENST00000378747 ANP32EQ9BTT0 268 aa12.34□□□□□ -0.43
OPTN-202ENST00000378747 FOXD1Q16676 465 aa12.33□□□□□ -0.44
OPTN-202ENST00000378747 USP47Q96K76 1375 aa12.33□□□□□ -0.44
OPTN-202ENST00000378747 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.33□□□□□ -0.44
OPTN-202ENST00000378747 EIF2AK4Q9P2K8 1649 aaKnown RBP12.32□□□□□ -0.44
OPTN-202ENST00000378747 FANCIQ9NVI1 1328 aa12.32□□□□□ -0.44
OPTN-202ENST00000378747 PLA2R1Q13018 1463 aa12.32□□□□□ -0.44
OPTN-202ENST00000378747 SLC4A1APQ9BWU0 796 aaKnown RBP12.32□□□□□ -0.44
OPTN-202ENST00000378747 CFDP1Q9UEE9 299 aaPredicted RBP12.32□□□□□ -0.44
OPTN-202ENST00000378747 RBM19Q9Y4C8 960 aaKnown RBP12.32□□□□□ -0.44
OPTN-202ENST00000378747 DEPDC5O75140 1603 aa12.32□□□□□ -0.44
OPTN-202ENST00000378747 JPH4Q96JJ6 628 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms