RNA–Protein interactions for RNA: ENST00000377619.9

COMMD6-204, Transcript of COMM domain containing 6, humanhuman

TSL 2 BASIC

Gene COMMD6, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-204ENST00000377619 NISCHQ9Y2I1 1504 aa12.55□□□□□ -0.4
COMMD6-204ENST00000377619 NLRP6P59044 892 aa12.53□□□□□ -0.4
COMMD6-204ENST00000377619 VARS2Q5ST30 1063 aaKnown RBP12.53□□□□□ -0.4
COMMD6-204ENST00000377619 TAOK2Q9UL54 1235 aa12.52□□□□□ -0.41
COMMD6-204ENST00000377619 STK24Q9Y6E0 443 aa12.52□□□□□ -0.41
COMMD6-204ENST00000377619 ZSWIM6Q9HCJ5 1215 aa12.51□□□□□ -0.41
COMMD6-204ENST00000377619 GPR153Q6NV75 609 aa12.5□□□□□ -0.41
COMMD6-204ENST00000377619 FBXO22Q8NEZ5 403 aa12.5□□□□□ -0.41
COMMD6-204ENST00000377619 ECM2O94769 699 aaPredicted RBP12.46□□□□□ -0.41
COMMD6-204ENST00000377619 STK25O00506 426 aa12.45□□□□□ -0.42
COMMD6-204ENST00000377619 ARSIQ5FYB1 569 aa12.45□□□□□ -0.42
COMMD6-204ENST00000377619 MFRPQ9BY79 579 aa12.45□□□□□ -0.42
COMMD6-204ENST00000377619 ZNF687Q8N1G0 1237 aa12.43□□□□□ -0.42
COMMD6-204ENST00000377619 KHSRPQ92945 711 aaKnown RBP eCLIP12.4□□□□□ -0.42
COMMD6-204ENST00000377619 RGL2O15211 777 aa12.37□□□□□ -0.43
COMMD6-204ENST00000377619 PKD2Q13563 968 aa12.37□□□□□ -0.43
COMMD6-204ENST00000377619 C2orf72A6NCS6 295 aa12.36□□□□□ -0.43
COMMD6-204ENST00000377619 KIF3CO14782 793 aa12.35□□□□□ -0.43
COMMD6-204ENST00000377619 ZNF316A6NFI3 1004 aaPredicted RBP12.34□□□□□ -0.43
COMMD6-204ENST00000377619 RNF166Q96A37 237 aaPredicted RBP12.34□□□□□ -0.43
COMMD6-204ENST00000377619 MYT1LQ9UL68 1186 aa12.32□□□□□ -0.44
COMMD6-204ENST00000377619 ANKRD13DQ6ZTN6 518 aa12.29□□□□□ -0.44
COMMD6-204ENST00000377619 NUDT7P0C024 238 aa12.27□□□□□ -0.45
COMMD6-204ENST00000377619 PPP1R37O75864 691 aa12.26□□□□□ -0.45
COMMD6-204ENST00000377619 TMC2Q8TDI7 906 aa12.26□□□□□ -0.45
COMMD6-204ENST00000377619 PCDHGA4Q9Y5G9 962 aa12.24□□□□□ -0.45
COMMD6-204ENST00000377619 SLC34A2O95436 690 aa12.22□□□□□ -0.45
COMMD6-204ENST00000377619 LHX6Q9UPM6 363 aa12.22□□□□□ -0.45
COMMD6-204ENST00000377619 PTGER2P43116 358 aa12.21□□□□□ -0.45
COMMD6-204ENST00000377619 LSM11P83369 360 aaKnown RBP eCLIP12.21□□□□□ -0.45
COMMD6-204ENST00000377619 AXIN2Q9Y2T1 843 aa12.17□□□□□ -0.46
COMMD6-204ENST00000377619 POTEEQ6S8J3 1075 aa12.16□□□□□ -0.46
COMMD6-204ENST00000377619 PBX2P40425 430 aa12.14□□□□□ -0.47
COMMD6-204ENST00000377619 HS6ST3Q8IZP7 471 aa12.08□□□□□ -0.48
COMMD6-204ENST00000377619 PTCD2Q8WV60 388 aaKnown RBP12.08□□□□□ -0.48
COMMD6-204ENST00000377619 KDM4FA0A1W2PPD8 638 aa12.07□□□□□ -0.48
COMMD6-204ENST00000377619 FOXK1P85037 733 aa12.07□□□□□ -0.48
COMMD6-204ENST00000377619 PLPP6Q8IY26 295 aa12.07□□□□□ -0.48
COMMD6-204ENST00000377619 GPHNQ9NQX3 736 aaPredicted RBP12.06□□□□□ -0.48
COMMD6-204ENST00000377619 ARHGAP33O14559 1287 aa12.05□□□□□ -0.48
COMMD6-204ENST00000377619 PSDA5PKW4 1024 aaPredicted RBP12.04□□□□□ -0.48
COMMD6-204ENST00000377619 CHGAP10645 457 aaKnown RBP12.03□□□□□ -0.48
COMMD6-204ENST00000377619 DSG2Q14126 1118 aa12.02□□□□□ -0.49
COMMD6-204ENST00000377619 ADGRD1Q6QNK2 874 aa12.02□□□□□ -0.49
COMMD6-204ENST00000377619 TBC1D12O60347 775 aa11.98□□□□□ -0.49
COMMD6-204ENST00000377619 PSEN2P49810 448 aa11.98□□□□□ -0.49
COMMD6-204ENST00000377619 DMRTA1Q5VZB9 504 aa11.97□□□□□ -0.49
COMMD6-204ENST00000377619 NKX1-1Q15270 411 aaPredicted RBP11.96□□□□□ -0.49
COMMD6-204ENST00000377619 TK2O00142 265 aa11.94□□□□□ -0.5
COMMD6-204ENST00000377619 PPP4R3BQ5MIZ7 849 aa11.94□□□□□ -0.5
COMMD6-204ENST00000377619 HCSTQ9UBK5 93 aa11.94□□□□□ -0.5
COMMD6-204ENST00000377619 HRO43593 1189 aa11.92□□□□□ -0.5
COMMD6-204ENST00000377619 DNAJC5Q9H3Z4 198 aa11.91□□□□□ -0.5
COMMD6-204ENST00000377619 PLA2G2EQ9NZK7 142 aa11.9□□□□□ -0.5
COMMD6-204ENST00000377619 OXER1Q8TDS5 423 aa11.89□□□□□ -0.51
COMMD6-204ENST00000377619 UPF1Q92900 1129 aaKnown RBP eCLIP11.89□□□□□ -0.51
COMMD6-204ENST00000377619 KCNK17Q96T54 332 aa11.87□□□□□ -0.51
COMMD6-204ENST00000377619 CRISPLD2Q9H0B8 497 aa11.87□□□□□ -0.51
COMMD6-204ENST00000377619 RYDENQ9NUL5 291 aaKnown RBP11.87□□□□□ -0.51
COMMD6-204ENST00000377619 STAC3Q96MF2 364 aa11.86□□□□□ -0.51
COMMD6-204ENST00000377619 KCTD12Q96CX2 325 aaKnown RBP11.84□□□□□ -0.51
COMMD6-204ENST00000377619 PPP1R15BQ5SWA1 713 aa11.83□□□□□ -0.52
COMMD6-204ENST00000377619 ZNF454Q8N9F8 522 aa11.83□□□□□ -0.52
COMMD6-204ENST00000377619 KCNH8Q96L42 1107 aa11.83□□□□□ -0.52
COMMD6-204ENST00000377619 PDE4AP27815 886 aa11.81□□□□□ -0.52
COMMD6-204ENST00000377619 VPS9D1Q9Y2B5 631 aa11.8□□□□□ -0.52
COMMD6-204ENST00000377619 NCKAP5LQ9HCH0 1330 aa11.8□□□□□ -0.52
COMMD6-204ENST00000377619 BCL2L12Q9HB09 334 aa11.77□□□□□ -0.53
COMMD6-204ENST00000377619 FOSBP53539 338 aa11.76□□□□□ -0.53
COMMD6-204ENST00000377619 GTPBP6O43824 516 aaPredicted RBP11.75□□□□□ -0.53
COMMD6-204ENST00000377619 ANO8Q9HCE9 1232 aaPredicted RBP11.75□□□□□ -0.53
COMMD6-204ENST00000377619 LARP6Q9BRS8 491 aaKnown RBP11.74□□□□□ -0.53
COMMD6-204ENST00000377619 EVI5O60447 810 aa11.73□□□□□ -0.53
COMMD6-204ENST00000377619 PTPN5P54829 565 aa11.73□□□□□ -0.53
COMMD6-204ENST00000377619 SLC4A5Q9BY07 1137 aa11.73□□□□□ -0.53
COMMD6-204ENST00000377619 PTPREP23469 700 aa11.72□□□□□ -0.53
COMMD6-204ENST00000377619 BHMG1C9JSJ3 638 aaPredicted RBP11.7□□□□□ -0.54
COMMD6-204ENST00000377619 DDX27Q96GQ7 796 aaKnown RBP11.7□□□□□ -0.54
COMMD6-204ENST00000377619 ZDHHC16Q969W1 377 aa11.69□□□□□ -0.54
COMMD6-204ENST00000377619 JPH4Q96JJ6 628 aa11.69□□□□□ -0.54
COMMD6-204ENST00000377619 ZBED2Q9BTP6 218 aa11.69□□□□□ -0.54
COMMD6-204ENST00000377619 MAP3K9P80192 1104 aa11.68□□□□□ -0.54
COMMD6-204ENST00000377619 ADAM33Q9BZ11 813 aa11.68□□□□□ -0.54
COMMD6-204ENST00000377619 GOLGA8CPA6NN73 597 aa11.65□□□□□ -0.54
COMMD6-204ENST00000377619 DCAF8L2P0C7V8 631 aa11.64□□□□□ -0.55
COMMD6-204ENST00000377619 MFSD10Q14728 455 aa11.64□□□□□ -0.55
COMMD6-204ENST00000377619 THSD4Q6ZMP0 1018 aa11.64□□□□□ -0.55
COMMD6-204ENST00000377619 MRPL50Q8N5N7 158 aaKnown RBP11.64□□□□□ -0.55
COMMD6-204ENST00000377619 EMILIN3Q9NT22 766 aa11.64□□□□□ -0.55
COMMD6-204ENST00000377619 WNT2BQ93097 391 aa11.62□□□□□ -0.55
COMMD6-204ENST00000377619 PCDHGA10Q9Y5H3 936 aa11.6□□□□□ -0.55
COMMD6-204ENST00000377619 CADPS2Q86UW7 1296 aa11.59□□□□□ -0.55
COMMD6-204ENST00000377619 NBPF3Q9H094 633 aa11.58□□□□□ -0.56
COMMD6-204ENST00000377619 PPP1R3GB7ZBB8 358 aa11.54□□□□□ -0.56
COMMD6-204ENST00000377619 COL9A1P20849 921 aa11.54□□□□□ -0.56
COMMD6-204ENST00000377619 PROX2Q3B8N5 592 aa11.54□□□□□ -0.56
COMMD6-204ENST00000377619 IFFO2Q5TF58 517 aa11.54□□□□□ -0.56
COMMD6-204ENST00000377619 RABGEF1Q9UJ41 708 aa11.53□□□□□ -0.56
COMMD6-204ENST00000377619 TYW1BQ6NUM6 668 aa11.52□□□□□ -0.57
COMMD6-204ENST00000377619 PHF14O94880 888 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms