RNA–Protein interactions for RNA: ENST00000376177.6

DDX39B-201, Transcript of DExD-box helicase 39B, humanhuman

TSL 5 BASIC

Gene DDX39B, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-201ENST00000376177 CEBPAP49715 358 aaPredicted RBP18.74■□□□□ 0.59
DDX39B-201ENST00000376177 ARHGEF12Q9NZN5 1544 aa18.73■□□□□ 0.59
DDX39B-201ENST00000376177 RANGAP1P46060 587 aaPredicted RBP18.7■□□□□ 0.58
DDX39B-201ENST00000376177 FAM9AQ8IZU1 332 aaPredicted RBP18.69■□□□□ 0.58
DDX39B-201ENST00000376177 MAGI2Q86UL8 1455 aa18.67■□□□□ 0.58
DDX39B-201ENST00000376177 PLEKHD1A6NEE1 506 aa18.64■□□□□ 0.58
DDX39B-201ENST00000376177 SCAPERQ9BY12 1400 aa18.64■□□□□ 0.57
DDX39B-201ENST00000376177 CDK13Q14004 1512 aaKnown RBP18.64■□□□□ 0.57
DDX39B-201ENST00000376177 ATP10AO60312 1499 aa18.62■□□□□ 0.57
DDX39B-201ENST00000376177 LTBP4Q8N2S1 1624 aa18.62■□□□□ 0.57
DDX39B-201ENST00000376177 C3P01024 1663 aa18.61■□□□□ 0.57
DDX39B-201ENST00000376177 C9orf84Q5VXU9 1444 aa18.61■□□□□ 0.57
DDX39B-201ENST00000376177 UHRF1BP1Q6BDS2 1440 aa18.59■□□□□ 0.57
DDX39B-201ENST00000376177 SETD1BQ9UPS6 1966 aaKnown RBP18.58■□□□□ 0.57
DDX39B-201ENST00000376177 MYO5CQ9NQX4 1742 aa18.58■□□□□ 0.56
DDX39B-201ENST00000376177 DMRT2Q9Y5R5 561 aa18.57■□□□□ 0.56
DDX39B-201ENST00000376177 PLCH2O75038 1416 aa18.57■□□□□ 0.56
DDX39B-201ENST00000376177 PTPRTO14522 1441 aa18.55■□□□□ 0.56
DDX39B-201ENST00000376177 KIF14Q15058 1648 aa18.53■□□□□ 0.56
DDX39B-201ENST00000376177 DIP2CQ9Y2E4 1556 aa18.53■□□□□ 0.56
DDX39B-201ENST00000376177 ABCA6Q8N139 1617 aa18.53■□□□□ 0.56
DDX39B-201ENST00000376177 CSRNP3Q8WYN3 585 aa18.51■□□□□ 0.55
DDX39B-201ENST00000376177 KDM5CP41229 1560 aa18.5■□□□□ 0.55
DDX39B-201ENST00000376177 AFAP1Q8N556 730 aa18.49■□□□□ 0.55
DDX39B-201ENST00000376177 NCOA1Q15788 1441 aa18.47■□□□□ 0.55
DDX39B-201ENST00000376177 IQSEC2Q5JU85 1478 aa18.47■□□□□ 0.55
DDX39B-201ENST00000376177 ZNF518AQ6AHZ1 1483 aa18.46■□□□□ 0.55
DDX39B-201ENST00000376177 REREQ9P2R6 1566 aa18.45■□□□□ 0.54
DDX39B-201ENST00000376177 CDC42BPBQ9Y5S2 1711 aa18.45■□□□□ 0.54
DDX39B-201ENST00000376177 EFCAB2Q5VUJ9 269 aa18.44■□□□□ 0.54
DDX39B-201ENST00000376177 LRRIQ1Q96JM4 1722 aa18.44■□□□□ 0.54
DDX39B-201ENST00000376177 CAMSAP1Q5T5Y3 1602 aa18.44■□□□□ 0.54
DDX39B-201ENST00000376177 ARHGAP5Q13017 1502 aa18.43■□□□□ 0.54
DDX39B-201ENST00000376177 MYT1LQ9UL68 1186 aa18.41■□□□□ 0.54
DDX39B-201ENST00000376177 TRAPPC8Q9Y2L5 1435 aa18.41■□□□□ 0.54
DDX39B-201ENST00000376177 ZNF335Q9H4Z2 1342 aaPredicted RBP18.41■□□□□ 0.54
DDX39B-201ENST00000376177 KIDINS220Q9ULH0 1771 aa18.39■□□□□ 0.53
DDX39B-201ENST00000376177 UBAP1LF5GYI3 381 aa18.39■□□□□ 0.53
DDX39B-201ENST00000376177 NCKAP5LQ9HCH0 1330 aa18.38■□□□□ 0.53
DDX39B-201ENST00000376177 ITSN2Q9NZM3 1697 aa18.38■□□□□ 0.53
DDX39B-201ENST00000376177 AGLP35573 1532 aa18.38■□□□□ 0.53
DDX39B-201ENST00000376177 ATP1B4Q9UN42 357 aaPredicted RBP18.38■□□□□ 0.53
DDX39B-201ENST00000376177 SUPT6HQ7KZ85 1726 aaKnown RBP18.37■□□□□ 0.53
DDX39B-201ENST00000376177 MLH3Q9UHC1 1453 aa18.36■□□□□ 0.53
DDX39B-201ENST00000376177 MED1Q15648 1581 aaPredicted RBP18.36■□□□□ 0.53
DDX39B-201ENST00000376177 ABCC1P33527 1531 aa18.34■□□□□ 0.53
DDX39B-201ENST00000376177 MROH2AA6NES4 1674 aa18.34■□□□□ 0.53
DDX39B-201ENST00000376177 PREX2Q70Z35 1606 aa18.33■□□□□ 0.52
DDX39B-201ENST00000376177 MYO3AQ8NEV4 1616 aa18.33■□□□□ 0.52
DDX39B-201ENST00000376177 TROQ12816 1431 aaPredicted RBP18.32■□□□□ 0.52
DDX39B-201ENST00000376177 ESF1Q9H501 851 aaKnown RBP18.32■□□□□ 0.52
DDX39B-201ENST00000376177 ZNF142P52746 1687 aaPredicted RBP18.32■□□□□ 0.52
DDX39B-201ENST00000376177 CLTCQ00610 1675 aaKnown RBP18.32■□□□□ 0.52
DDX39B-201ENST00000376177 EHMT2Q96KQ7 1210 aa18.31■□□□□ 0.52
DDX39B-201ENST00000376177 CDC42BPAQ5VT25 1732 aa18.29■□□□□ 0.52
DDX39B-201ENST00000376177 CNTLNQ9NXG0 1405 aa18.28■□□□□ 0.52
DDX39B-201ENST00000376177 ARHGAP35Q9NRY4 1499 aa18.27■□□□□ 0.52
DDX39B-201ENST00000376177 HSPA1LP34931 641 aa18.27■□□□□ 0.51
DDX39B-201ENST00000376177 NPATQ14207 1427 aa18.27■□□□□ 0.51
DDX39B-201ENST00000376177 ZMYM3Q14202 1370 aa18.26■□□□□ 0.51
DDX39B-201ENST00000376177 CEP170BQ9Y4F5 1589 aaPredicted RBP18.25■□□□□ 0.51
DDX39B-201ENST00000376177 EEA1Q15075 1411 aa18.25■□□□□ 0.51
DDX39B-201ENST00000376177 TCOF1Q13428 1488 aaKnown RBP18.25■□□□□ 0.51
DDX39B-201ENST00000376177 FMN1Q68DA7 1419 aa18.25■□□□□ 0.51
DDX39B-201ENST00000376177 SAMD9LQ8IVG5 1584 aa18.24■□□□□ 0.51
DDX39B-201ENST00000376177 CDK11AQ9UQ88 783 aaPredicted RBP18.23■□□□□ 0.51
DDX39B-201ENST00000376177 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
DDX39B-201ENST00000376177 CLIP1P30622 1438 aa18.23■□□□□ 0.51
DDX39B-201ENST00000376177 PLA2R1Q13018 1463 aa18.23■□□□□ 0.51
DDX39B-201ENST00000376177 PIP4K2BP78356 416 aa18.22■□□□□ 0.51
DDX39B-201ENST00000376177 PTPRKQ15262 1439 aa18.2■□□□□ 0.5
DDX39B-201ENST00000376177 SYCP2Q9BX26 1530 aa18.19■□□□□ 0.5
DDX39B-201ENST00000376177 POLR1AO95602 1720 aaPredicted RBP18.19■□□□□ 0.5
DDX39B-201ENST00000376177 ALKQ9UM73 1620 aa18.18■□□□□ 0.5
DDX39B-201ENST00000376177 PKD2Q13563 968 aa18.18■□□□□ 0.5
DDX39B-201ENST00000376177 PLXNC1O60486 1568 aa18.17■□□□□ 0.5
DDX39B-201ENST00000376177 DNMT1P26358 1616 aaKnown RBP18.17■□□□□ 0.5
DDX39B-201ENST00000376177 PPP6R1Q9UPN7 881 aa18.17■□□□□ 0.5
DDX39B-201ENST00000376177 NEURL4Q96JN8 1562 aa18.17■□□□□ 0.5
DDX39B-201ENST00000376177 INO80Q9ULG1 1556 aaPredicted RBP18.15■□□□□ 0.5
DDX39B-201ENST00000376177 ATP7AQ04656 1500 aa18.14■□□□□ 0.49
DDX39B-201ENST00000376177 UBTFP17480 764 aaKnown RBP18.13■□□□□ 0.49
DDX39B-201ENST00000376177 ZNF777Q9ULD5 760 aaPredicted RBP18.13■□□□□ 0.49
DDX39B-201ENST00000376177 HNRNPMP52272 730 aaKnown RBP eCLIP18.12■□□□□ 0.49
DDX39B-201ENST00000376177 SENP3Q9H4L4 574 aaPredicted RBP18.11■□□□□ 0.49
DDX39B-201ENST00000376177 SPAG9O60271 1321 aaKnown RBP18.1■□□□□ 0.49
DDX39B-201ENST00000376177 GGT6Q6P531 493 aa18.1■□□□□ 0.49
DDX39B-201ENST00000376177 A2ML1A8K2U0 1454 aa18.1■□□□□ 0.49
DDX39B-201ENST00000376177 A2MP01023 1474 aa18.1■□□□□ 0.49
DDX39B-201ENST00000376177 SHANK2Q9UPX8 1470 aa18.1■□□□□ 0.49
DDX39B-201ENST00000376177 VWDEQ8N2E2 1590 aa18.09■□□□□ 0.49
DDX39B-201ENST00000376177 CPS1P31327 1500 aa18.09■□□□□ 0.49
DDX39B-201ENST00000376177 PHF23Q9BUL5 403 aaPredicted RBP18.08■□□□□ 0.49
DDX39B-201ENST00000376177 STRCP1A6NGW2 1772 aa18.08■□□□□ 0.49
DDX39B-201ENST00000376177 TOM1O60784 492 aa18.08■□□□□ 0.48
DDX39B-201ENST00000376177 GPATCH8Q9UKJ3 1502 aaKnown RBP18.06■□□□□ 0.48
DDX39B-201ENST00000376177 ADGBQ8N7X0 1667 aa18.05■□□□□ 0.48
DDX39B-201ENST00000376177 CCDC18Q5T9S5 1454 aa18.05■□□□□ 0.48
DDX39B-201ENST00000376177 CASKIN1Q8WXD9 1431 aa18.04■□□□□ 0.48
DDX39B-201ENST00000376177 FBXO31Q5XUX0 539 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms