RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 DDX10Q13206 875 aaKnown RBP18.2■□□□□ 0.5
MSH5-204ENST00000375755 NAIPQ13075 1403 aa18.19■□□□□ 0.5
MSH5-204ENST00000375755 TCOF1Q13428 1488 aaKnown RBP18.19■□□□□ 0.5
MSH5-204ENST00000375755 ABCA8O94911 1581 aa18.18■□□□□ 0.5
MSH5-204ENST00000375755 HFM1A2PYH4 1435 aa18.17■□□□□ 0.5
MSH5-204ENST00000375755 CDK11AQ9UQ88 783 aaPredicted RBP18.17■□□□□ 0.5
MSH5-204ENST00000375755 KDM6BO15054 1643 aa18.16■□□□□ 0.5
MSH5-204ENST00000375755 ATP10BO94823 1461 aa18.16■□□□□ 0.5
MSH5-204ENST00000375755 TROQ12816 1431 aaPredicted RBP18.16■□□□□ 0.5
MSH5-204ENST00000375755 PTPRGP23470 1445 aa18.16■□□□□ 0.5
MSH5-204ENST00000375755 ZNF777Q9ULD5 760 aaPredicted RBP18.15■□□□□ 0.5
MSH5-204ENST00000375755 MIA2Q96PC5 1412 aa18.14■□□□□ 0.49
MSH5-204ENST00000375755 TRIM52Q96A61 297 aa18.13■□□□□ 0.49
MSH5-204ENST00000375755 PPP1R15AO75807 674 aaPredicted RBP18.11■□□□□ 0.49
MSH5-204ENST00000375755 GPATCH8Q9UKJ3 1502 aaKnown RBP18.1■□□□□ 0.49
MSH5-204ENST00000375755 CFDP1Q9UEE9 299 aaPredicted RBP18.1■□□□□ 0.49
MSH5-204ENST00000375755 PLEKHD1A6NEE1 506 aa18.09■□□□□ 0.49
MSH5-204ENST00000375755 ABCC5O15440 1437 aa18.09■□□□□ 0.49
MSH5-204ENST00000375755 DAPK1P53355 1430 aa18.08■□□□□ 0.49
MSH5-204ENST00000375755 UACAQ9BZF9 1416 aa18.06■□□□□ 0.48
MSH5-204ENST00000375755 ADCY10Q96PN6 1610 aa18.06■□□□□ 0.48
MSH5-204ENST00000375755 FANCIQ9NVI1 1328 aa18.05■□□□□ 0.48
MSH5-204ENST00000375755 CAMSAP2Q08AD1 1489 aa18.05■□□□□ 0.48
MSH5-204ENST00000375755 OSCARQ8IYS5 282 aa18.05■□□□□ 0.48
MSH5-204ENST00000375755 CCER2I3L3R5 266 aa18.05■□□□□ 0.48
MSH5-204ENST00000375755 GCC2Q8IWJ2 1684 aa18.04■□□□□ 0.48
MSH5-204ENST00000375755 DNMT1P26358 1616 aaKnown RBP18.04■□□□□ 0.48
MSH5-204ENST00000375755 FOXD1Q16676 465 aa18.04■□□□□ 0.48
MSH5-204ENST00000375755 CDC42BPAQ5VT25 1732 aa18.04■□□□□ 0.48
MSH5-204ENST00000375755 DENND4BO75064 1496 aaPredicted RBP18.02■□□□□ 0.48
MSH5-204ENST00000375755 HIRIP3Q9BW71 556 aaPredicted RBP18.02■□□□□ 0.47
MSH5-204ENST00000375755 ABCC10Q5T3U5 1492 aa18.01■□□□□ 0.47
MSH5-204ENST00000375755 ITSN2Q9NZM3 1697 aa18.01■□□□□ 0.47
MSH5-204ENST00000375755 ANP32CO43423 234 aa18■□□□□ 0.47
MSH5-204ENST00000375755 ERICH6Q7L0X2 663 aa17.98■□□□□ 0.47
MSH5-204ENST00000375755 HNRNPMP52272 730 aaKnown RBP eCLIP17.96■□□□□ 0.47
MSH5-204ENST00000375755 AKNAQ7Z591 1439 aa17.96■□□□□ 0.47
MSH5-204ENST00000375755 MPHOSPH9Q99550 1183 aa17.95■□□□□ 0.46
MSH5-204ENST00000375755 IRX6P78412 446 aaPredicted RBP17.93■□□□□ 0.46
MSH5-204ENST00000375755 ABCC2Q92887 1545 aa17.93■□□□□ 0.46
MSH5-204ENST00000375755 ROCK1Q13464 1354 aa17.92■□□□□ 0.46
MSH5-204ENST00000375755 CDC42BPBQ9Y5S2 1711 aa17.92■□□□□ 0.46
MSH5-204ENST00000375755 TTC37Q6PGP7 1564 aa17.91■□□□□ 0.46
MSH5-204ENST00000375755 NCOA1Q15788 1441 aa17.91■□□□□ 0.46
MSH5-204ENST00000375755 CROCC2H7BZ55 1655 aa17.91■□□□□ 0.46
MSH5-204ENST00000375755 UHRF1BP1LA0JNW5 1464 aa17.9■□□□□ 0.46
MSH5-204ENST00000375755 TONSLQ96HA7 1378 aa17.89■□□□□ 0.46
MSH5-204ENST00000375755 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.88■□□□□ 0.45
MSH5-204ENST00000375755 ZCCHC11Q5TAX3 1644 aaKnown RBP17.88■□□□□ 0.45
MSH5-204ENST00000375755 ADGBQ8N7X0 1667 aa17.87■□□□□ 0.45
MSH5-204ENST00000375755 TIMELESSQ9UNS1 1208 aa17.87■□□□□ 0.45
MSH5-204ENST00000375755 SAMD9LQ8IVG5 1584 aa17.87■□□□□ 0.45
MSH5-204ENST00000375755 DEKP35659 375 aaKnown RBP17.85■□□□□ 0.45
MSH5-204ENST00000375755 SLC4A1APQ9BWU0 796 aaKnown RBP17.85■□□□□ 0.45
MSH5-204ENST00000375755 PREX2Q70Z35 1606 aa17.85■□□□□ 0.45
MSH5-204ENST00000375755 KDM5BQ9UGL1 1544 aa17.85■□□□□ 0.45
MSH5-204ENST00000375755 HNRNPUQ00839 825 aaKnown RBP eCLIP17.84■□□□□ 0.45
MSH5-204ENST00000375755 C9orf84Q5VXU9 1444 aa17.84■□□□□ 0.45
MSH5-204ENST00000375755 RIMBP3CA6NJZ7 1639 aa17.83■□□□□ 0.45
MSH5-204ENST00000375755 RIMBP3BA6NNM3 1639 aa17.83■□□□□ 0.45
MSH5-204ENST00000375755 RIMBP3Q9UFD9 1639 aa17.83■□□□□ 0.45
MSH5-204ENST00000375755 MYT1LQ9UL68 1186 aa17.83■□□□□ 0.45
MSH5-204ENST00000375755 MBD5Q9P267 1494 aa17.83■□□□□ 0.45
MSH5-204ENST00000375755 ADGRL2O95490 1459 aa17.82■□□□□ 0.44
MSH5-204ENST00000375755 ARHGAP5Q13017 1502 aa17.82■□□□□ 0.44
MSH5-204ENST00000375755 ANKRD30AQ9BXX3 1397 aa17.81■□□□□ 0.44
MSH5-204ENST00000375755 PZPP20742 1482 aa17.81■□□□□ 0.44
MSH5-204ENST00000375755 ANO8Q9HCE9 1232 aaPredicted RBP17.8■□□□□ 0.44
MSH5-204ENST00000375755 SYCP2Q9BX26 1530 aa17.8■□□□□ 0.44
MSH5-204ENST00000375755 TSPY4P0CV99 314 aa17.8■□□□□ 0.44
MSH5-204ENST00000375755 TSPY10P0CW01 314 aa17.8■□□□□ 0.44
MSH5-204ENST00000375755 ANKRD50Q9ULJ7 1429 aa17.79■□□□□ 0.44
MSH5-204ENST00000375755 ANKRD30BQ9BXX2 1392 aa17.78■□□□□ 0.44
MSH5-204ENST00000375755 MYO5CQ9NQX4 1742 aa17.77■□□□□ 0.44
MSH5-204ENST00000375755 L3MBTL2Q969R5 705 aa17.77■□□□□ 0.44
MSH5-204ENST00000375755 PPP4R2Q9NY27 417 aa17.76■□□□□ 0.43
MSH5-204ENST00000375755 ARHGEF12Q9NZN5 1544 aa17.76■□□□□ 0.43
MSH5-204ENST00000375755 KIF15Q9NS87 1388 aa17.76■□□□□ 0.43
MSH5-204ENST00000375755 ARHGEF5Q12774 1597 aa17.75■□□□□ 0.43
MSH5-204ENST00000375755 PKD2Q13563 968 aa17.74■□□□□ 0.43
MSH5-204ENST00000375755 ERICH6BQ5W0A0 696 aa17.74■□□□□ 0.43
MSH5-204ENST00000375755 CCDC141Q6ZP82 1450 aa17.74■□□□□ 0.43
MSH5-204ENST00000375755 SHANK2Q9UPX8 1470 aa17.74■□□□□ 0.43
MSH5-204ENST00000375755 NUP155O75694 1391 aa17.72■□□□□ 0.43
MSH5-204ENST00000375755 PLCH2O75038 1416 aa17.7■□□□□ 0.42
MSH5-204ENST00000375755 RPRD2Q5VT52 1461 aaKnown RBP17.69■□□□□ 0.42
MSH5-204ENST00000375755 NBPF8Q3BBV2 869 aa17.69■□□□□ 0.42
MSH5-204ENST00000375755 B4GALNT3Q6L9W6 998 aa17.68■□□□□ 0.42
MSH5-204ENST00000375755 NBR1Q14596 966 aa17.67■□□□□ 0.42
MSH5-204ENST00000375755 NOP58Q9Y2X3 529 aaKnown RBP17.67■□□□□ 0.42
MSH5-204ENST00000375755 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.67■□□□□ 0.424e-7■■□□□ 12.9
MSH5-204ENST00000375755 TRAPPC8Q9Y2L5 1435 aa17.67■□□□□ 0.42
MSH5-204ENST00000375755 PAK3O75914 559 aaPredicted RBP17.66■□□□□ 0.42
MSH5-204ENST00000375755 KIAA1107Q9UPP5 1409 aa17.66■□□□□ 0.42
MSH5-204ENST00000375755 AFAP1Q8N556 730 aa17.66■□□□□ 0.42
MSH5-204ENST00000375755 TEX14Q8IWB6 1497 aa17.65■□□□□ 0.42
MSH5-204ENST00000375755 EFCAB2Q5VUJ9 269 aa17.65■□□□□ 0.42
MSH5-204ENST00000375755 WDR7Q9Y4E6 1490 aa17.65■□□□□ 0.42
MSH5-204ENST00000375755 CCDC136Q96JN2 1154 aa17.64■□□□□ 0.41
MSH5-204ENST00000375755 ASXL2Q76L83 1435 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms