RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 PLEKHD1A6NEE1 506 aa21.4■■□□□ 1.02
MSH5-203ENST00000375750 ANP32CO43423 234 aa21.4■■□□□ 1.02
MSH5-203ENST00000375750 ZNF644Q9H582 1327 aaPredicted RBP21.39■■□□□ 1.01
MSH5-203ENST00000375750 MIA2Q96PC5 1412 aa21.39■■□□□ 1.01
MSH5-203ENST00000375750 TCOF1Q13428 1488 aaKnown RBP21.38■■□□□ 1.01
MSH5-203ENST00000375750 CLASP1Q7Z460 1538 aa21.36■■□□□ 1.01
MSH5-203ENST00000375750 RRP7BPQ9NSQ0 103 aa21.35■■□□□ 1.01
MSH5-203ENST00000375750 KIF14Q15058 1648 aa21.35■■□□□ 1.01
MSH5-203ENST00000375750 NEFLP07196 543 aa21.34■■□□□ 1.01
MSH5-203ENST00000375750 UACAQ9BZF9 1416 aa21.34■■□□□ 1.01
MSH5-203ENST00000375750 HFM1A2PYH4 1435 aa21.32■■□□□ 1
MSH5-203ENST00000375750 CFDP1Q9UEE9 299 aaPredicted RBP21.32■■□□□ 1
MSH5-203ENST00000375750 TONSLQ96HA7 1378 aa21.32■■□□□ 1
MSH5-203ENST00000375750 ZNF777Q9ULD5 760 aaPredicted RBP21.31■■□□□ 1
MSH5-203ENST00000375750 RBM19Q9Y4C8 960 aaKnown RBP21.31■■□□□ 1
MSH5-203ENST00000375750 NAIPQ13075 1403 aa21.31■■□□□ 1
MSH5-203ENST00000375750 CCER2I3L3R5 266 aa21.3■■□□□ 1
MSH5-203ENST00000375750 IRX6P78412 446 aaPredicted RBP21.3■■□□□ 1
MSH5-203ENST00000375750 TIMELESSQ9UNS1 1208 aa21.3■■□□□ 1
MSH5-203ENST00000375750 GPATCH8Q9UKJ3 1502 aaKnown RBP21.29■■□□□ 1
MSH5-203ENST00000375750 ADCY10Q96PN6 1610 aa21.26■□□□□ 0.99
MSH5-203ENST00000375750 ABCC5O15440 1437 aa21.23■□□□□ 0.99
MSH5-203ENST00000375750 DAPK1P53355 1430 aa21.23■□□□□ 0.99
MSH5-203ENST00000375750 ABCC10Q5T3U5 1492 aa21.22■□□□□ 0.99
MSH5-203ENST00000375750 CAMSAP2Q08AD1 1489 aa21.21■□□□□ 0.99
MSH5-203ENST00000375750 ABCC2Q92887 1545 aa21.21■□□□□ 0.99
MSH5-203ENST00000375750 HNRNPUQ00839 825 aaKnown RBP eCLIP21.2■□□□□ 0.98
MSH5-203ENST00000375750 OSCARQ8IYS5 282 aa21.18■□□□□ 0.98
MSH5-203ENST00000375750 ITSN2Q9NZM3 1697 aa21.18■□□□□ 0.98
MSH5-203ENST00000375750 DNMT1P26358 1616 aaKnown RBP21.17■□□□□ 0.98
MSH5-203ENST00000375750 KDM6BO15054 1643 aa21.15■□□□□ 0.98
MSH5-203ENST00000375750 CDC42BPAQ5VT25 1732 aa21.15■□□□□ 0.98
MSH5-203ENST00000375750 CCDC184Q52MB2 194 aa21.14■□□□□ 0.97
MSH5-203ENST00000375750 AKNAQ7Z591 1439 aa21.13■□□□□ 0.97
MSH5-203ENST00000375750 MSH5O43196 834 aa21.12■□□□□ 0.97
MSH5-203ENST00000375750 HSPA5P11021 654 aaKnown RBP21.12■□□□□ 0.97
MSH5-203ENST00000375750 ROCK1Q13464 1354 aa21.12■□□□□ 0.97
MSH5-203ENST00000375750 GCC2Q8IWJ2 1684 aa21.11■□□□□ 0.97
MSH5-203ENST00000375750 WASHC2AQ641Q2 1341 aa21.11■□□□□ 0.97
MSH5-203ENST00000375750 HNRNPMP52272 730 aaKnown RBP eCLIP21.1■□□□□ 0.97
MSH5-203ENST00000375750 FOXD1Q16676 465 aa21.1■□□□□ 0.97
MSH5-203ENST00000375750 UHRF1BP1LA0JNW5 1464 aa21.09■□□□□ 0.97
MSH5-203ENST00000375750 KDM5BQ9UGL1 1544 aa21.09■□□□□ 0.97
MSH5-203ENST00000375750 ZCCHC11Q5TAX3 1644 aaKnown RBP21.07■□□□□ 0.96
MSH5-203ENST00000375750 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.06■□□□□ 0.96
MSH5-203ENST00000375750 NCOA1Q15788 1441 aa21.06■□□□□ 0.96
MSH5-203ENST00000375750 TTC37Q6PGP7 1564 aa21.05■□□□□ 0.96
MSH5-203ENST00000375750 C11orf95C9JLR9 678 aaPredicted RBP21.04■□□□□ 0.96
MSH5-203ENST00000375750 MPHOSPH9Q99550 1183 aa21.04■□□□□ 0.96
MSH5-203ENST00000375750 CDC42BPBQ9Y5S2 1711 aa21.03■□□□□ 0.96
MSH5-203ENST00000375750 DENND4BO75064 1496 aaPredicted RBP21.02■□□□□ 0.96
MSH5-203ENST00000375750 TSPY4P0CV99 314 aa21.02■□□□□ 0.95
MSH5-203ENST00000375750 TSPY10P0CW01 314 aa21.02■□□□□ 0.95
MSH5-203ENST00000375750 BCL11AQ9H165 835 aa21■□□□□ 0.95
MSH5-203ENST00000375750 PREX2Q70Z35 1606 aa21■□□□□ 0.95
MSH5-203ENST00000375750 ANKRD30AQ9BXX3 1397 aa21■□□□□ 0.95
MSH5-203ENST00000375750 FAM9BQ8IZU0 186 aa20.99■□□□□ 0.95
MSH5-203ENST00000375750 SAMD9LQ8IVG5 1584 aa20.99■□□□□ 0.95
MSH5-203ENST00000375750 MBD5Q9P267 1494 aa20.99■□□□□ 0.95
MSH5-203ENST00000375750 ARHGAP5Q13017 1502 aa20.99■□□□□ 0.95
MSH5-203ENST00000375750 CROCC2H7BZ55 1655 aa20.98■□□□□ 0.95
MSH5-203ENST00000375750 CNGB1Q14028 1251 aaPredicted RBP20.98■□□□□ 0.95
MSH5-203ENST00000375750 C9orf84Q5VXU9 1444 aa20.98■□□□□ 0.95
MSH5-203ENST00000375750 ADGRL2O95490 1459 aa20.97■□□□□ 0.95
MSH5-203ENST00000375750 L3MBTL2Q969R5 705 aa20.97■□□□□ 0.95
MSH5-203ENST00000375750 EIF4G2P78344 907 aaKnown RBP eCLIP20.96■□□□□ 0.95
MSH5-203ENST00000375750 ADGBQ8N7X0 1667 aa20.95■□□□□ 0.94
MSH5-203ENST00000375750 SLC4A1APQ9BWU0 796 aaKnown RBP20.95■□□□□ 0.94
MSH5-203ENST00000375750 SHANK2Q9UPX8 1470 aa20.92■□□□□ 0.94
MSH5-203ENST00000375750 PLCH2O75038 1416 aa20.92■□□□□ 0.94
MSH5-203ENST00000375750 ANKRD50Q9ULJ7 1429 aa20.92■□□□□ 0.94
MSH5-203ENST00000375750 SYCP2Q9BX26 1530 aa20.92■□□□□ 0.94
MSH5-203ENST00000375750 SENP3-EIF4A1A0A087X0R7 540 aa20.92■□□□□ 0.94
MSH5-203ENST00000375750 MYO5CQ9NQX4 1742 aa20.91■□□□□ 0.94
MSH5-203ENST00000375750 ARHGEF5Q12774 1597 aa20.91■□□□□ 0.94
MSH5-203ENST00000375750 CCDC141Q6ZP82 1450 aa20.91■□□□□ 0.94
MSH5-203ENST00000375750 RSPH4AQ5TD94 716 aa20.91■□□□□ 0.94
MSH5-203ENST00000375750 NBPF8Q3BBV2 869 aa20.9■□□□□ 0.94
MSH5-203ENST00000375750 EFCAB2Q5VUJ9 269 aa20.9■□□□□ 0.94
MSH5-203ENST00000375750 B4GALNT3Q6L9W6 998 aa20.9■□□□□ 0.94
MSH5-203ENST00000375750 WDR7Q9Y4E6 1490 aa20.89■□□□□ 0.93
MSH5-203ENST00000375750 MRS2Q9HD23 443 aa20.89■□□□□ 0.93
MSH5-203ENST00000375750 KIF15Q9NS87 1388 aa20.88■□□□□ 0.93
MSH5-203ENST00000375750 PRKRIP1Q9H875 184 aaPredicted RBP20.88■□□□□ 0.93
MSH5-203ENST00000375750 ARHGEF12Q9NZN5 1544 aa20.87■□□□□ 0.93
MSH5-203ENST00000375750 CNTLNQ9NXG0 1405 aa20.86■□□□□ 0.93
MSH5-203ENST00000375750 NPM1P06748 294 aaKnown RBP eCLIP20.86■□□□□ 0.93
MSH5-203ENST00000375750 ASXL2Q76L83 1435 aa20.86■□□□□ 0.93
MSH5-203ENST00000375750 PZPP20742 1482 aa20.85■□□□□ 0.93
MSH5-203ENST00000375750 KIAA1107Q9UPP5 1409 aa20.84■□□□□ 0.93
MSH5-203ENST00000375750 CCDC7Q96M83 1385 aa20.84■□□□□ 0.93
MSH5-203ENST00000375750 ANKRD30BQ9BXX2 1392 aa20.84■□□□□ 0.93
MSH5-203ENST00000375750 PPP4R2Q9NY27 417 aa20.82■□□□□ 0.92
MSH5-203ENST00000375750 NUP155O75694 1391 aa20.82■□□□□ 0.92
MSH5-203ENST00000375750 PLEKHH2Q8IVE3 1493 aa20.82■□□□□ 0.92
MSH5-203ENST00000375750 PKD2Q13563 968 aa20.81■□□□□ 0.92
MSH5-203ENST00000375750 FANCIQ9NVI1 1328 aa20.81■□□□□ 0.92
MSH5-203ENST00000375750 POLR3GLQ9BT43 218 aa20.8■□□□□ 0.92
MSH5-203ENST00000375750 TRAPPC8Q9Y2L5 1435 aa20.79■□□□□ 0.92
MSH5-203ENST00000375750 AFAP1Q8N556 730 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms