RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 HAP1P54257 671 aaPredicted RBP27.04■■□□□ 1.92
TGFBR1-202ENST00000374994 L3MBTL2Q969R5 705 aa27.02■■□□□ 1.92
TGFBR1-202ENST00000374994 RAPGEF2Q9Y4G8 1499 aa27.02■■□□□ 1.92
TGFBR1-202ENST00000374994 NLRP13Q86W25 1043 aa27.01■■□□□ 1.92
TGFBR1-202ENST00000374994 ANKRD30AQ9BXX3 1397 aa27.01■■□□□ 1.91
TGFBR1-202ENST00000374994 MORC1Q86VD1 984 aa27■■□□□ 1.91
TGFBR1-202ENST00000374994 RWDD1Q9H446 243 aaPredicted RBP27■■□□□ 1.91
TGFBR1-202ENST00000374994 PHLDB1Q86UU1 1377 aa27■■□□□ 1.91
TGFBR1-202ENST00000374994 FANCIQ9NVI1 1328 aa27■■□□□ 1.91
TGFBR1-202ENST00000374994 POGKQ9P215 609 aa26.99■■□□□ 1.91
TGFBR1-202ENST00000374994 U2SURPO15042 1029 aaKnown RBP26.99■■□□□ 1.91
TGFBR1-202ENST00000374994 WIZO95785 1651 aa26.99■■□□□ 1.91
TGFBR1-202ENST00000374994 IPO8O15397 1037 aaKnown RBP26.98■■□□□ 1.91
TGFBR1-202ENST00000374994 GBP4Q96PP9 640 aa26.96■■□□□ 1.91
TGFBR1-202ENST00000374994 MSNP26038 577 aaKnown RBP26.96■■□□□ 1.91
TGFBR1-202ENST00000374994 FOXD1Q16676 465 aa26.95■■□□□ 1.9
TGFBR1-202ENST00000374994 ZBED9Q6R2W3 1325 aa26.94■■□□□ 1.9
TGFBR1-202ENST00000374994 NUP155O75694 1391 aa26.93■■□□□ 1.9
TGFBR1-202ENST00000374994 PMFBP1Q8TBY8 1022 aa26.93■■□□□ 1.9
TGFBR1-202ENST00000374994 MCCP23508 829 aa26.91■■□□□ 1.9
TGFBR1-202ENST00000374994 GOLGA6L6A8MZA4 724 aa26.9■■□□□ 1.9
TGFBR1-202ENST00000374994 KIF15Q9NS87 1388 aa26.89■■□□□ 1.9
TGFBR1-202ENST00000374994 GOLGA2Q08379 1002 aa26.89■■□□□ 1.9
TGFBR1-202ENST00000374994 PRKRIP1Q9H875 184 aaPredicted RBP26.88■■□□□ 1.89
TGFBR1-202ENST00000374994 CARMIL2Q6F5E8 1435 aa26.88■■□□□ 1.89
TGFBR1-202ENST00000374994 NRDCO43847 1150 aa26.87■■□□□ 1.89
TGFBR1-202ENST00000374994 CHAF1AQ13111 956 aaPredicted RBP26.86■■□□□ 1.89
TGFBR1-202ENST00000374994 MYBBP1AQ9BQG0 1328 aaKnown RBP26.85■■□□□ 1.89
TGFBR1-202ENST00000374994 EIF3AQ14152 1382 aaKnown RBP26.85■■□□□ 1.89
TGFBR1-202ENST00000374994 CALD1Q05682 793 aaKnown RBP26.84■■□□□ 1.89
TGFBR1-202ENST00000374994 CDK11BP21127 795 aaKnown RBP26.82■■□□□ 1.88
TGFBR1-202ENST00000374994 FHOD3Q2V2M9 1422 aa26.82■■□□□ 1.88
TGFBR1-202ENST00000374994 C14orf37Q86TY3 774 aa26.82■■□□□ 1.88
TGFBR1-202ENST00000374994 PLCB2Q00722 1185 aa26.81■■□□□ 1.88
TGFBR1-202ENST00000374994 CCDC18Q5T9S5 1454 aa26.81■■□□□ 1.88
TGFBR1-202ENST00000374994 GOLGA6L3A6NEY3 463 aa26.8■■□□□ 1.88
TGFBR1-202ENST00000374994 RSPH4AQ5TD94 716 aa26.8■■□□□ 1.88
TGFBR1-202ENST00000374994 PLPPR3Q6T4P5 718 aa26.8■■□□□ 1.88
TGFBR1-202ENST00000374994 SLKQ9H2G2 1235 aaPredicted RBP26.78■■□□□ 1.88
TGFBR1-202ENST00000374994 CENPQQ7L2Z9 268 aaPredicted RBP26.77■■□□□ 1.88
TGFBR1-202ENST00000374994 GOLGA6L4A6NEF3 574 aa26.76■■□□□ 1.88
TGFBR1-202ENST00000374994 RUSC2Q8N2Y8 1516 aa26.76■■□□□ 1.87
TGFBR1-202ENST00000374994 SPRYD3Q8NCJ5 442 aa26.75■■□□□ 1.87
TGFBR1-202ENST00000374994 PDE4AP27815 886 aa26.75■■□□□ 1.87
TGFBR1-202ENST00000374994 PDS5BQ9NTI5 1447 aa26.74■■□□□ 1.87
TGFBR1-202ENST00000374994 OS9Q13438 667 aaPredicted RBP26.74■■□□□ 1.87
TGFBR1-202ENST00000374994 SRPK2P78362 688 aaKnown RBP26.74■■□□□ 1.87
TGFBR1-202ENST00000374994 SENP3Q9H4L4 574 aaPredicted RBP26.74■■□□□ 1.87
TGFBR1-202ENST00000374994 KCNJ4P48050 445 aa26.73■■□□□ 1.87
TGFBR1-202ENST00000374994 ZBTB7CA1YPR0 619 aa26.73■■□□□ 1.87
TGFBR1-202ENST00000374994 CENPJQ9HC77 1338 aaPredicted RBP26.72■■□□□ 1.87
TGFBR1-202ENST00000374994 U2AF1L5P0DN76 240 aaPredicted RBP26.72■■□□□ 1.87
TGFBR1-202ENST00000374994 U2AF1Q01081 240 aaKnown RBP eCLIP26.72■■□□□ 1.87
TGFBR1-202ENST00000374994 RRP1P56182 461 aaKnown RBP26.71■■□□□ 1.87
TGFBR1-202ENST00000374994 ITPRIPQ8IWB1 547 aa26.7■■□□□ 1.87
TGFBR1-202ENST00000374994 HDGFL2Q7Z4V5 671 aaPredicted RBP26.7■■□□□ 1.87
TGFBR1-202ENST00000374994 CADPSQ9ULU8 1353 aa26.7■■□□□ 1.86
TGFBR1-202ENST00000374994 FAM161AQ3B820 660 aa26.7■■□□□ 1.86
TGFBR1-202ENST00000374994 TDRD9Q8NDG6 1382 aaKnown RBP26.69■■□□□ 1.86
TGFBR1-202ENST00000374994 FGD1P98174 961 aa26.69■■□□□ 1.86
TGFBR1-202ENST00000374994 TPRNQ4KMQ1 711 aa26.69■■□□□ 1.86
TGFBR1-202ENST00000374994 SYAP1Q96A49 352 aaPredicted RBP26.68■■□□□ 1.86
TGFBR1-202ENST00000374994 ERCC6Q03468 1493 aa26.68■■□□□ 1.86
TGFBR1-202ENST00000374994 SMARCA4P51532 1647 aa26.68■■□□□ 1.86
TGFBR1-202ENST00000374994 HDGFP51858 240 aaKnown RBP26.66■■□□□ 1.86
TGFBR1-202ENST00000374994 KIAA2012Q0VF49 1180 aa26.66■■□□□ 1.86
TGFBR1-202ENST00000374994 EFCAB2Q5VUJ9 269 aa26.66■■□□□ 1.86
TGFBR1-202ENST00000374994 ATAD2BQ9ULI0 1458 aa26.66■■□□□ 1.86
TGFBR1-202ENST00000374994 GSE1Q14687 1217 aa26.64■■□□□ 1.85
TGFBR1-202ENST00000374994 NGEFQ8N5V2 710 aa26.64■■□□□ 1.85
TGFBR1-202ENST00000374994 GZF1Q9H116 711 aaPredicted RBP26.63■■□□□ 1.85
TGFBR1-202ENST00000374994 MFAP1P55081 439 aaKnown RBP26.62■■□□□ 1.85
TGFBR1-202ENST00000374994 DDX11L8A8MPP1 907 aa26.61■■□□□ 1.85
TGFBR1-202ENST00000374994 RSPH6AQ9H0K4 717 aa26.61■■□□□ 1.85
TGFBR1-202ENST00000374994 SMC4Q9NTJ3 1288 aa26.61■■□□□ 1.85
TGFBR1-202ENST00000374994 ST20-MTHFSA0A0A6YYL1 179 aa26.6■■□□□ 1.85
TGFBR1-202ENST00000374994 CGNL1Q0VF96 1302 aa26.6■■□□□ 1.85
TGFBR1-202ENST00000374994 USP47Q96K76 1375 aa26.6■■□□□ 1.85
TGFBR1-202ENST00000374994 CHMP4AQ9BY43 222 aa26.59■■□□□ 1.85
TGFBR1-202ENST00000374994 EXOC6Q8TAG9 804 aa26.58■■□□□ 1.85
TGFBR1-202ENST00000374994 RTF1Q92541 710 aaKnown RBP26.57■■□□□ 1.84
TGFBR1-202ENST00000374994 KIAA1211Q6ZU35 1233 aa26.57■■□□□ 1.84
TGFBR1-202ENST00000374994 E9PSI1 815 aa26.56■■□□□ 1.84
TGFBR1-202ENST00000374994 UACAQ9BZF9 1416 aa26.55■■□□□ 1.84
TGFBR1-202ENST00000374994 CCDC144AA2RUR9 1427 aa26.54■■□□□ 1.84
TGFBR1-202ENST00000374994 HMMRO75330 724 aa26.53■■□□□ 1.84
TGFBR1-202ENST00000374994 KIF21BO75037 1637 aa26.53■■□□□ 1.84
TGFBR1-202ENST00000374994 HTATSF1O43719 755 aaKnown RBP26.53■■□□□ 1.84
TGFBR1-202ENST00000374994 DRC7Q8IY82 874 aa26.52■■□□□ 1.84
TGFBR1-202ENST00000374994 CCDC7Q96M83 1385 aa26.52■■□□□ 1.84
TGFBR1-202ENST00000374994 TERF2IPQ9NYB0 399 aa26.52■■□□□ 1.84
TGFBR1-202ENST00000374994 CNTLNQ9NXG0 1405 aa26.52■■□□□ 1.84
TGFBR1-202ENST00000374994 PANK3Q9H999 370 aa26.51■■□□□ 1.83
TGFBR1-202ENST00000374994 SKOR2Q2VWA4 1001 aaPredicted RBP26.5■■□□□ 1.83
TGFBR1-202ENST00000374994 LMOD3Q0VAK6 560 aa26.49■■□□□ 1.83
TGFBR1-202ENST00000374994 CCDC146Q8IYE0 955 aa26.49■■□□□ 1.83
TGFBR1-202ENST00000374994 FGD6Q6ZV73 1430 aa26.48■■□□□ 1.83
TGFBR1-202ENST00000374994 CRBNQ96SW2 442 aa26.48■■□□□ 1.83
TGFBR1-202ENST00000374994 CLUAP1Q96AJ1 413 aa26.46■■□□□ 1.83
TGFBR1-202ENST00000374994 SAFB2Q14151 953 aaKnown RBP eCLIP26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms